Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30452
(738 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 141 1e-32
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 133 4e-30
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 132 7e-30
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 129 8e-29
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 109 5e-23
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 106 5e-22
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 106 6e-22
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 104 2e-21
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 101 2e-20
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 95 2e-18
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 89 1e-16
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 87 3e-16
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 87 3e-16
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 87 6e-16
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 87 6e-16
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 86 1e-15
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 85 1e-15
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 85 1e-15
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 85 2e-15
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 85 2e-15
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 84 3e-15
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 84 4e-15
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 84 4e-15
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 84 4e-15
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 83 9e-15
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 82 1e-14
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 82 1e-14
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 82 1e-14
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 82 1e-14
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 82 2e-14
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 81 3e-14
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 81 3e-14
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 81 3e-14
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 81 4e-14
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 81 4e-14
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 80 5e-14
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 80 6e-14
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 80 6e-14
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 80 6e-14
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 79 9e-14
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 79 9e-14
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 79 9e-14
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 79 9e-14
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 79 1e-13
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 79 1e-13
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 79 1e-13
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 79 1e-13
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 79 1e-13
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 79 1e-13
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 79 1e-13
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 79 1e-13
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 78 2e-13
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 78 2e-13
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 78 2e-13
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 78 2e-13
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 78 3e-13
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 78 3e-13
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 77 3e-13
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 77 3e-13
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 77 3e-13
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 77 3e-13
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 77 5e-13
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 77 5e-13
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 77 5e-13
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 77 6e-13
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 77 6e-13
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 76 8e-13
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 76 8e-13
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 76 8e-13
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 76 8e-13
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 76 8e-13
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 76 1e-12
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 76 1e-12
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 76 1e-12
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 75 1e-12
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 75 1e-12
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 75 1e-12
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 75 1e-12
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 75 2e-12
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 75 2e-12
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 75 2e-12
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 75 2e-12
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 2e-12
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 75 2e-12
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 75 2e-12
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 75 2e-12
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 75 2e-12
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 75 2e-12
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 75 2e-12
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 75 2e-12
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 74 3e-12
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 74 3e-12
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 74 3e-12
UniRef50_A7RMK9 Cluster: Predicted protein; n=1; Nematostella ve... 74 3e-12
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 74 3e-12
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 74 3e-12
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 74 4e-12
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 74 4e-12
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 74 4e-12
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 74 4e-12
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 73 6e-12
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 73 6e-12
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 73 6e-12
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 73 6e-12
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 73 7e-12
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 73 7e-12
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 73 7e-12
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 73 7e-12
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 73 7e-12
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 73 7e-12
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 73 7e-12
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 73 7e-12
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 73 7e-12
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 73 7e-12
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 73 7e-12
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 73 1e-11
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 73 1e-11
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 73 1e-11
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 73 1e-11
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 73 1e-11
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 73 1e-11
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 72 1e-11
UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic... 72 1e-11
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 72 1e-11
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 72 1e-11
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 72 1e-11
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 72 1e-11
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 72 1e-11
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 72 1e-11
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 72 1e-11
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 72 2e-11
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 72 2e-11
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 72 2e-11
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 72 2e-11
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 72 2e-11
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 72 2e-11
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 72 2e-11
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 72 2e-11
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 72 2e-11
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 71 2e-11
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 71 2e-11
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 71 2e-11
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 71 2e-11
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 71 2e-11
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 71 2e-11
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 71 3e-11
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 71 3e-11
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 71 3e-11
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 71 3e-11
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 71 3e-11
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 71 3e-11
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 71 3e-11
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re... 71 3e-11
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 71 3e-11
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 71 3e-11
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 71 3e-11
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 71 4e-11
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 71 4e-11
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 71 4e-11
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 71 4e-11
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 71 4e-11
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 71 4e-11
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 71 4e-11
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 71 4e-11
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 71 4e-11
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 70 5e-11
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 70 5e-11
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 70 5e-11
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 70 5e-11
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 70 5e-11
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 70 5e-11
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 70 5e-11
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 70 7e-11
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 70 7e-11
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 70 7e-11
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 70 7e-11
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 70 7e-11
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 70 7e-11
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 70 7e-11
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 70 7e-11
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 70 7e-11
UniRef50_P25808 Cluster: ATP-dependent rRNA helicase SPB4; n=10;... 70 7e-11
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 70 7e-11
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 70 7e-11
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 70 7e-11
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 9e-11
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 69 9e-11
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 69 9e-11
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 69 9e-11
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 69 9e-11
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 1e-10
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 1e-10
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 69 1e-10
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 1e-10
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 69 1e-10
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 69 1e-10
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 69 1e-10
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 69 1e-10
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 69 1e-10
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 69 1e-10
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 69 1e-10
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 69 1e-10
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 69 2e-10
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 69 2e-10
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 69 2e-10
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 2e-10
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 69 2e-10
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 69 2e-10
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 69 2e-10
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 2e-10
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 69 2e-10
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 69 2e-10
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 69 2e-10
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 69 2e-10
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 69 2e-10
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 68 2e-10
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 68 2e-10
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 68 2e-10
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 68 2e-10
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 68 2e-10
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 68 2e-10
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 68 2e-10
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 68 2e-10
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 68 2e-10
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 68 2e-10
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 68 3e-10
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 68 3e-10
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 68 3e-10
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 68 3e-10
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 68 3e-10
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 68 3e-10
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 68 3e-10
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 68 3e-10
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 68 3e-10
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 68 3e-10
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 68 3e-10
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 68 3e-10
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 68 3e-10
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 67 4e-10
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 67 4e-10
UniRef50_Q4Q552 Cluster: ATP-dependent RNA helicase, putative; n... 67 4e-10
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 67 4e-10
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 67 4e-10
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 67 4e-10
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 67 4e-10
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 67 4e-10
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 67 5e-10
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 67 5e-10
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 67 5e-10
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 67 5e-10
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 67 5e-10
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 67 5e-10
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 67 5e-10
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 67 5e-10
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 67 5e-10
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 67 5e-10
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 67 5e-10
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 66 6e-10
UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5; Bact... 66 6e-10
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 66 6e-10
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 66 6e-10
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 66 6e-10
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 66 8e-10
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 66 8e-10
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 66 8e-10
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 66 8e-10
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 66 8e-10
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 66 8e-10
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 66 8e-10
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 8e-10
UniRef50_Q7PMT7 Cluster: ENSANGP00000010668; n=1; Anopheles gamb... 66 8e-10
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 66 8e-10
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 66 8e-10
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 66 8e-10
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 66 8e-10
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 66 8e-10
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 66 8e-10
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 66 1e-09
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 66 1e-09
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 66 1e-09
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 66 1e-09
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 66 1e-09
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 66 1e-09
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 66 1e-09
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 66 1e-09
UniRef50_Q54CH6 Cluster: Putative uncharacterized protein; n=1; ... 66 1e-09
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 66 1e-09
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 66 1e-09
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 66 1e-09
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 65 1e-09
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 65 1e-09
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 65 1e-09
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 65 1e-09
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 65 1e-09
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 65 1e-09
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 65 1e-09
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 65 1e-09
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 65 1e-09
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 65 1e-09
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_Q92499 Cluster: ATP-dependent RNA helicase DDX1; n=56; ... 65 1e-09
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 65 2e-09
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 65 2e-09
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 65 2e-09
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 65 2e-09
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 65 2e-09
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 65 2e-09
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 65 2e-09
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 65 2e-09
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 65 2e-09
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 65 2e-09
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 65 2e-09
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 65 2e-09
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 65 2e-09
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 64 3e-09
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 64 3e-09
UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 64 3e-09
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 64 3e-09
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 64 3e-09
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 64 3e-09
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 64 3e-09
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 64 3e-09
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 64 3e-09
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 64 3e-09
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 64 3e-09
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 64 3e-09
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 64 3e-09
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 64 3e-09
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 64 3e-09
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 64 3e-09
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 64 3e-09
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 3e-09
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 64 3e-09
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 64 3e-09
UniRef50_Q014T4 Cluster: Chromosome 07 contig 1, DNA sequence; n... 64 3e-09
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 64 3e-09
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 64 3e-09
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 64 3e-09
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 64 3e-09
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 64 3e-09
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 64 3e-09
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 64 3e-09
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 64 3e-09
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 64 3e-09
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 64 3e-09
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 64 3e-09
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 64 3e-09
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 64 5e-09
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 64 5e-09
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 64 5e-09
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 64 5e-09
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 64 5e-09
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 64 5e-09
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 64 5e-09
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 64 5e-09
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 64 5e-09
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 64 5e-09
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 64 5e-09
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 64 5e-09
UniRef50_A7ECJ8 Cluster: Putative uncharacterized protein; n=1; ... 64 5e-09
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 64 5e-09
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 63 6e-09
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 63 6e-09
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 63 6e-09
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 63 6e-09
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 63 6e-09
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 63 6e-09
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 63 6e-09
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 63 6e-09
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 63 8e-09
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 63 8e-09
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 63 8e-09
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 63 8e-09
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 63 8e-09
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 63 8e-09
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 63 8e-09
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 63 8e-09
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 63 8e-09
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 63 8e-09
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 63 8e-09
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 63 8e-09
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 63 8e-09
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 63 8e-09
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 63 8e-09
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 63 8e-09
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 63 8e-09
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 62 1e-08
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 62 1e-08
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 62 1e-08
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 62 1e-08
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 62 1e-08
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 62 1e-08
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 62 1e-08
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 62 1e-08
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 62 1e-08
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 62 1e-08
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 62 1e-08
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 62 1e-08
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 62 1e-08
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 62 1e-08
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 62 1e-08
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 62 1e-08
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 62 1e-08
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 62 1e-08
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 62 1e-08
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 62 1e-08
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 62 1e-08
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 62 1e-08
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 62 1e-08
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 62 1e-08
UniRef50_A0CUN8 Cluster: Chromosome undetermined scaffold_28, wh... 62 1e-08
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 62 1e-08
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 62 1e-08
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 62 1e-08
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 62 2e-08
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 62 2e-08
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 62 2e-08
UniRef50_Q9N341 Cluster: Putative uncharacterized protein; n=2; ... 62 2e-08
UniRef50_Q55CP6 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 62 2e-08
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 62 2e-08
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 61 2e-08
UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic... 61 2e-08
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 61 2e-08
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 61 2e-08
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 61 2e-08
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 61 2e-08
UniRef50_Q03AA2 Cluster: Superfamily II DNA and RNA helicase; n=... 61 2e-08
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 61 2e-08
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 61 2e-08
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 61 2e-08
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 61 2e-08
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 61 2e-08
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 61 2e-08
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 61 2e-08
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 61 2e-08
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 61 2e-08
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 61 2e-08
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 61 3e-08
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 61 3e-08
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 61 3e-08
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 61 3e-08
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 61 3e-08
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 61 3e-08
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 61 3e-08
UniRef50_Q8IJ90 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 61 3e-08
UniRef50_Q4N4Z2 Cluster: ATP-dependent RNA helicase, putative; n... 61 3e-08
UniRef50_A0E4U1 Cluster: Chromosome undetermined scaffold_79, wh... 61 3e-08
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 61 3e-08
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 61 3e-08
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 61 3e-08
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 61 3e-08
UniRef50_Q7S873 Cluster: ATP-dependent RNA helicase dbp-7; n=2; ... 61 3e-08
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 60 4e-08
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 60 4e-08
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 60 4e-08
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 60 4e-08
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 60 4e-08
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 60 4e-08
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 60 4e-08
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 60 4e-08
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 60 4e-08
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 60 4e-08
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 60 4e-08
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 60 4e-08
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 60 4e-08
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 60 4e-08
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 60 6e-08
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 60 6e-08
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 60 6e-08
UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1; Bigelo... 60 6e-08
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 60 6e-08
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 60 6e-08
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 60 6e-08
UniRef50_Q56X76 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 60 6e-08
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 60 6e-08
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 60 6e-08
UniRef50_Q9GZR7 Cluster: ATP-dependent RNA helicase DDX24; n=33;... 60 6e-08
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 141 bits (342), Expect = 1e-32
Identities = 66/85 (77%), Positives = 76/85 (89%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 DP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQ 178
DP G ++T+WD VV+ FDDMNLKE LLRG+YAYGFEKPSAIQQRAI+ CI+G DVIAQAQ
Sbjct: 16 DPDGVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHDVIAQAQ 75
Query: 179 SGTGKTATFSISILQQIDTSIRECQ 253
SGTGKTATF ISILQ+IDTS++E Q
Sbjct: 76 SGTGKTATFVISILQRIDTSLKETQ 100
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 133 bits (322), Expect = 4e-30
Identities = 61/85 (71%), Positives = 75/85 (88%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 DP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQ 178
DP G ++++W+++V+ FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+ CI+G DVIAQAQ
Sbjct: 19 DPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQ 78
Query: 179 SGTGKTATFSISILQQIDTSIRECQ 253
SGTGKTATF+ISILQQ++ +E Q
Sbjct: 79 SGTGKTATFAISILQQLEIEFKETQ 103
Score = 129 bits (311), Expect = 8e-29
Identities = 59/87 (67%), Positives = 75/87 (86%), Gaps = 1/87 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES-GVHVVVGTPGRV 429
+L+LAPTRELAQQIQKV++ALGD++ A CHACIGGTNVR ++++L++ H+VVGTPGRV
Sbjct: 104 ALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRV 163
Query: 430 YDMITRRALHANTIKLFVLDEADEMLS 510
+DM+ RR L IK+FVLDEADEMLS
Sbjct: 164 FDMLNRRYLSPKWIKMFVLDEADEMLS 190
Score = 126 bits (305), Expect = 4e-28
Identities = 56/76 (73%), Positives = 69/76 (90%)
Frame = +3
Query: 510 RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 689
RGFKDQI+++F+ L+ +QV+LLSATMP DVLEV++ FMRDP+RILV+KEELTLEGIKQF
Sbjct: 191 RGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQF 250
Query: 690 YIAIELEEWKLETLCD 737
YI +E EEWKL+TLCD
Sbjct: 251 YINVEREEWKLDTLCD 266
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 132 bits (320), Expect = 7e-30
Identities = 61/87 (70%), Positives = 74/87 (85%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LILAPTRELA QIQK ++ALGD++N +CHACIGGTNV EDIR+L+ G HVV GTPGRV+
Sbjct: 109 ALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVF 168
Query: 433 DMITRRALHANTIKLFVLDEADEMLSE 513
DMI RR+L IK+ VLDEADEML++
Sbjct: 169 DMIRRRSLRTRAIKMLVLDEADEMLNK 195
Score = 114 bits (275), Expect = 2e-24
Identities = 55/73 (75%), Positives = 62/73 (84%)
Frame = +2
Query: 35 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSIS 214
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QSGTGKTATFSIS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 95
Query: 215 ILQQIDTSIRECQ 253
+LQ +D +RE Q
Sbjct: 96 VLQCLDIQVRETQ 108
Score = 109 bits (263), Expect = 5e-23
Identities = 45/76 (59%), Positives = 65/76 (85%)
Frame = +3
Query: 510 RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 689
+GFK+QI+DV++ L QV+L+SAT+P ++LE++ FM DP+RILV+++ELTLEGIKQF
Sbjct: 195 KGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQF 254
Query: 690 YIAIELEEWKLETLCD 737
++A+E EEWK +TLCD
Sbjct: 255 FVAVEREEWKFDTLCD 270
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 129 bits (311), Expect = 8e-29
Identities = 60/97 (61%), Positives = 75/97 (77%)
Frame = +2
Query: 8 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGT 187
G ++++W ++ + FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+ CI+G DVIAQAQSGT
Sbjct: 24 GIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGT 83
Query: 188 GKTATFSISILQQIDTSIRECQV*SWLPQESWPNKFR 298
GKTATF+ISILQQ++ +E Q P ++R
Sbjct: 84 GKTATFAISILQQLEIDQKETQALVLAPTRELAQQWR 120
Score = 109 bits (261), Expect = 9e-23
Identities = 50/66 (75%), Positives = 60/66 (90%)
Frame = +3
Query: 540 FKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWK 719
F+ LS ++QV+LLSATMP +VLEV++ FMRDPVRILV+KEELTLEGIKQFYI +E EEWK
Sbjct: 160 FQKLSTNIQVVLLSATMPAEVLEVTKKFMRDPVRILVKKEELTLEGIKQFYINVEREEWK 219
Query: 720 LETLCD 737
L+TLCD
Sbjct: 220 LDTLCD 225
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 109 bits (263), Expect = 5e-23
Identities = 45/76 (59%), Positives = 65/76 (85%)
Frame = +3
Query: 510 RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 689
+GFK+QI+DV++ L QV+L+SAT+P ++LE++ FM DP+RILV+++ELTLEGIKQF
Sbjct: 174 KGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQF 233
Query: 690 YIAIELEEWKLETLCD 737
++A+E EEWK +TLCD
Sbjct: 234 FVAVEREEWKFDTLCD 249
Score = 108 bits (259), Expect = 2e-22
Identities = 47/70 (67%), Positives = 59/70 (84%)
Frame = +1
Query: 304 VIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFV 483
++ALGD++N +CHACIGGTNV EDIR+L+ G HVV GTPGRV+DMI RR+L IK+ V
Sbjct: 105 LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV 164
Query: 484 LDEADEMLSE 513
LDEADEML++
Sbjct: 165 LDEADEMLNK 174
Score = 107 bits (258), Expect = 2e-22
Identities = 51/66 (77%), Positives = 58/66 (87%)
Frame = +2
Query: 35 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSIS 214
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QSGTGKTATFS+S
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVS 95
Query: 215 ILQQID 232
+LQ +D
Sbjct: 96 VLQCLD 101
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 106 bits (255), Expect = 5e-22
Identities = 49/81 (60%), Positives = 65/81 (80%)
Frame = +2
Query: 14 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGK 193
L +W + VETF+D+ L ++LLRGI++YGFE+PSAIQQ+AI I G+DV+AQAQSGTGK
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGK 106
Query: 194 TATFSISILQQIDTSIRECQV 256
T TF+I LQ+ID + R+ QV
Sbjct: 107 TGTFTIGALQRIDPNQRKTQV 127
Score = 91.5 bits (217), Expect = 2e-17
Identities = 40/86 (46%), Positives = 60/86 (69%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
+ILAP RELA+QI VV +G +LN + CIGGT+ +E + + GVH+++ TPGR+ D
Sbjct: 128 IILAPVRELAKQIYDVVKGIGQYLNIEAFCCIGGTSTQETREKCKQGVHIIIATPGRLID 187
Query: 436 MITRRALHANTIKLFVLDEADEMLSE 513
M+ + L A ++L V+DEAD+ML +
Sbjct: 188 MMKNKYLDATFMRLLVVDEADQMLDQ 213
Score = 83.8 bits (198), Expect = 4e-15
Identities = 37/77 (48%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD-PVRILVQKEELTLEGIKQ 686
+GF D ++ KM+ D+Q+ L SAT P +++E+S+ F+RD +ILV+KE+LTLEGI+Q
Sbjct: 213 QGFSDNFAEILKMVPGDIQIALFSATFPQEIIELSKQFLRDGTAKILVKKEQLTLEGIRQ 272
Query: 687 FYIAIELEEWKLETLCD 737
FYIAI+ E+ K + L +
Sbjct: 273 FYIAIQQEDQKFKVLVE 289
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 106 bits (254), Expect = 6e-22
Identities = 47/78 (60%), Positives = 63/78 (80%)
Frame = +2
Query: 20 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTA 199
T+ +++ +FD M +K +LLRGIYAY FEKPSA+QQRA++ IQG DVIAQAQSGTGKT+
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTS 328
Query: 200 TFSISILQQIDTSIRECQ 253
F++++ Q +DTS RE Q
Sbjct: 329 MFALTVYQMVDTSNREVQ 346
Score = 40.7 bits (91), Expect = 0.036
Identities = 16/32 (50%), Positives = 25/32 (78%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCH 342
+ +LI +PTRELA Q +KV++A+GD +N + H
Sbjct: 345 VQALISSPTRELASQTEKVILAIGDSVNIQAH 376
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 104 bits (250), Expect = 2e-21
Identities = 48/74 (64%), Positives = 61/74 (82%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GFKDQIH++F L +VQ ILLSATMP VLE ++ FM+DPV+IL+++EELT+EGI+QFY
Sbjct: 142 GFKDQIHEIFCKLPTNVQAILLSATMPAHVLEATKMFMQDPVKILIKREELTMEGIQQFY 201
Query: 693 IAIELEEWKLETLC 734
I E EE KLE+LC
Sbjct: 202 IKTETEEKKLESLC 215
Score = 100 bits (239), Expect = 4e-20
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
V++F+ M L E LLRGI+AYGFEKPSAIQQ+AI+ CI+G DVIAQ+QSGTGKTAT+ I+
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAA 79
Query: 218 LQQIDTSIRECQV*SWLPQESWPNKFRR 301
LQ+ID + Q P N+ ++
Sbjct: 80 LQRIDMMKEDTQAIILAPTRELANQIQK 107
Score = 40.7 bits (91), Expect = 0.036
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +1
Query: 379 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
R+L + + VV + RV+D++ RRA+ A I+L VLDEAD+ML
Sbjct: 99 RELANQIQKVVLS--RVFDVLARRAVSAKAIRLLVLDEADQML 139
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIA 312
++ILAPTRELA QIQKVV++
Sbjct: 92 AIILAPTRELANQIQKVVLS 111
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 101 bits (241), Expect = 2e-20
Identities = 44/76 (57%), Positives = 61/76 (80%)
Frame = +3
Query: 510 RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 689
RGFKDQI+ +F+ L D+QV L SATM ++LE+++ FMRDP ILV+ ++LTL+GIKQF
Sbjct: 258 RGFKDQINKIFQNLPHDIQVALFSATMAPEILEITKQFMRDPATILVKNDDLTLDGIKQF 317
Query: 690 YIAIELEEWKLETLCD 737
YIA++ EEWK +TL +
Sbjct: 318 YIALDKEEWKFDTLVE 333
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/71 (53%), Positives = 53/71 (74%)
Frame = +1
Query: 295 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIK 474
+KV++ LG+ L +AC GGT+ +ED ++L GV VVVGTPGRV D+I ++ L + +K
Sbjct: 186 KKVIMYLGEFLKVSAYACTGGTDPKEDRKRLREGVQVVVGTPGRVLDLIQKKTLVTDHLK 245
Query: 475 LFVLDEADEML 507
LF+LDEADEML
Sbjct: 246 LFILDEADEML 256
Score = 75.8 bits (178), Expect = 1e-12
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +2
Query: 80 RGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQIDTS 238
+ + +YGFEKPS IQQ I+ I+G+D IAQAQSGTGKTATFSI+ LQ IDTS
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTS 99
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 94.7 bits (225), Expect = 2e-18
Identities = 43/88 (48%), Positives = 59/88 (67%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ +LI+ PTRELA Q +VV LG H C GGTN+R+DI +L VH++VGTPGR
Sbjct: 115 IQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGR 174
Query: 427 VYDMITRRALHANTIKLFVLDEADEMLS 510
V D+ +R+ + LF++DEAD+MLS
Sbjct: 175 VLDLASRKVADLSDCSLFIMDEADKMLS 202
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/76 (48%), Positives = 51/76 (67%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF+D LK ELL GI+ GFEKPS IQ+ AI I GRD++A+A++GTGKTA F I L+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106
Query: 224 QIDTSIRECQV*SWLP 271
++ + + Q +P
Sbjct: 107 KVKPKLNKIQALIMVP 122
Score = 41.5 bits (93), Expect = 0.021
Identities = 29/74 (39%), Positives = 36/74 (48%)
Frame = +3
Query: 510 RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 689
R FK I + L Q +L SAT P V E + P I + EELTL+GI Q+
Sbjct: 203 RDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLM-EELTLKGITQY 261
Query: 690 YIAIELEEWKLETL 731
Y +E E KL L
Sbjct: 262 YAFVE-ERQKLHCL 274
>UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28;
Alphaproteobacteria|Rep: Cold-shock dead-box protein A -
Bradyrhizobium japonicum
Length = 650
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LI+APTRELA Q+Q+ + L +H + + +C+GG + R + R+L +G H+VVGTPGR+
Sbjct: 76 ALIVAPTRELALQVQRELAWLYEHADGRVVSCVGGMDPRREQRELAAGAHIVVGTPGRLC 135
Query: 433 DMITRRALHANTIKLFVLDEADEMLS 510
D + R L + +K VLDEADEML+
Sbjct: 136 DHLRRGRLDISELKAVVLDEADEMLN 161
Score = 36.3 bits (80), Expect = 0.78
Identities = 13/52 (25%), Positives = 30/52 (57%)
Frame = +2
Query: 74 LLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
L R + +++P+ +Q + GRD++ AQ+G+GKT + +++ + +
Sbjct: 10 LARALAERNYDRPTPVQLAVLTEEAAGRDLLVSAQTGSGKTLAYGLALAKDL 61
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 87.4 bits (207), Expect = 3e-16
Identities = 44/86 (51%), Positives = 57/86 (66%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LILAPTRELA Q+ + ++ LG H GG + IR L++GV +VVGTPGRV
Sbjct: 77 ALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRALKNGVDIVVGTPGRVL 136
Query: 433 DMITRRALHANTIKLFVLDEADEMLS 510
D+I R++L N I VLDEADEML+
Sbjct: 137 DLIRRKSLPLNDIGFLVLDEADEMLN 162
Score = 72.5 bits (170), Expect = 1e-11
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
FDD+ LKE LL+ I GFE+PS IQ +I ++G D+I QAQ+GTGKTA F +I+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 227 IDTS 238
D S
Sbjct: 66 ADFS 69
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 87.4 bits (207), Expect = 3e-16
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LI+APTRELA Q+ + + L + NA+ C+GG ++R++ R LE G H+VVGTPGR+ D
Sbjct: 79 LIIAPTRELALQVARELRWLYANTNAEIATCVGGMDMRDERRALERGAHIVVGTPGRLVD 138
Query: 436 MITRRALHANTIKLFVLDEADEML 507
I R + + I+ VLDEADEML
Sbjct: 139 HINRGSFDTSAIRAVVLDEADEML 162
Score = 40.3 bits (90), Expect = 0.048
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Frame = +2
Query: 56 MNLKEEL---LRG-IYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
MNL E L LR I+ G+E + +Q A ++GRD++ A++G+GKT F ++I
Sbjct: 1 MNLPETLPAALRAAIHERGYETLTEVQAAATAPELEGRDLLVSARTGSGKTVAFGLAIAN 60
Query: 224 QI 229
++
Sbjct: 61 EL 62
>UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;
n=1; uncultured marine bacterium 66A03|Rep: Putative
cold-shock dead-box protein A - uncultured marine
bacterium 66A03
Length = 659
Score = 86.6 bits (205), Expect = 6e-16
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++I+APTRELA Q++K + L A+ +C+GG + R + R LESG H+VVGTPGR+
Sbjct: 77 AIIIAPTRELALQVRKELEWLYVRTKAQFASCVGGMDPRAERRTLESGAHIVVGTPGRLR 136
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D I R L + IK VLDEADEML
Sbjct: 137 DHIERGVLRLSDIKAVVLDEADEML 161
Score = 33.1 bits (72), Expect = 7.3
Identities = 12/50 (24%), Positives = 30/50 (60%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEE 662
GF++ + + + + +L SAT+P ++++++ + +D VRI V ++
Sbjct: 164 GFREDLTFILGKAPVERRTLLFSATVPTQIVKLAKTYQKDSVRISVSSKK 213
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 86.6 bits (205), Expect = 6e-16
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = +1
Query: 232 YKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVV 411
Y + +L+L PT +LA + Q V+ LG L+AK HA GGT+ ED + L +GV V V
Sbjct: 110 YASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQILSTGVQVAV 169
Query: 412 GTPGRVYDMITRRALHANTIKLFVLDEADEML 507
GTP V M+ RAL + I++FVLDEADE+L
Sbjct: 170 GTPCHVLGMLQGRALCPDHIRMFVLDEADEVL 201
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Frame = +3
Query: 504 VVRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGI- 680
V+RGFKDQIH + + L Q SA+M + LE+ R +M PV I+V ++E LEGI
Sbjct: 200 VLRGFKDQIHGIIQFLPTKTQFGFFSASMSHEALEMCRKYMNKPVEIIVPRDE-ELEGIN 258
Query: 681 -KQFYIAIELEEWKLETLC 734
KQFY+ +E E+ KL+ LC
Sbjct: 259 VKQFYVNVEKEDCKLDKLC 277
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/73 (35%), Positives = 37/73 (50%)
Frame = +2
Query: 35 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSIS 214
+V T + E L+ +KPSA+ QR I+ G D+I Q+ GT T T
Sbjct: 46 IVTTQGAQFISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCCG 103
Query: 215 ILQQIDTSIRECQ 253
ILQ++D + ECQ
Sbjct: 104 ILQRLDYASTECQ 116
>UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 85.8 bits (203), Expect = 1e-15
Identities = 42/58 (72%), Positives = 46/58 (79%)
Frame = +2
Query: 56 MNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
M LKE LLRGIYAYG EKPSAIQQ+ I+ +G DVI QAQSGTGKTATF ILQQ+
Sbjct: 1 MGLKENLLRGIYAYGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL 58
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 85.4 bits (202), Expect = 1e-15
Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPGRV 429
++++APTRELA Q+ + LG ++ K GG ++ + +R L+SG H+VVGTPGRV
Sbjct: 97 AIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAHIVVGTPGRV 156
Query: 430 YDMITRRALHANTIKLFVLDEADEML 507
D+ITR LH + F+LDEADEML
Sbjct: 157 KDLITRDRLHLDECHTFILDEADEML 182
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F D+ L +L + GF P+ IQ AI ++GRD + +AQ+GTGKTA FS+ +L +
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 227 IDTS 238
++ S
Sbjct: 88 LNLS 91
Score = 36.3 bits (80), Expect = 0.78
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF D + + + Q +L SATMP V E+ F+R+P + V T+ ++Q Y
Sbjct: 185 GFVDDVTWIMEQAPESAQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQY 244
Query: 693 IAIE 704
++
Sbjct: 245 WVVK 248
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 85.4 bits (202), Expect = 1e-15
Identities = 41/85 (48%), Positives = 59/85 (69%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LI+APTRELA Q+Q+ ++ L A+ +CIGG + R + + LE G H+VVGTPGR+
Sbjct: 120 ALIVAPTRELAMQVQQELLWLYGPAGARVVSCIGGMDARREAQALERGCHIVVGTPGRLC 179
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + R L+ + ++ VLDEADEML
Sbjct: 180 DHLGRGRLNLSRLRAVVLDEADEML 204
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 85.0 bits (201), Expect = 2e-15
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Frame = +1
Query: 250 SSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRV 429
S+L++ PTRELA Q+ + AL H + A GG ++ E +++LE+G ++VGTPGR+
Sbjct: 90 SALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQLQKLEAGAEIIVGTPGRI 149
Query: 430 YDMITRRALHANTIKLFVLDEADEMLS-----EVXXXXXXXXXXCCQLMFKS 570
YD I RR L + + LDEADEML+ EV C QL+F +
Sbjct: 150 YDHIRRRTLKLDETMVCCLDEADEMLNMGFFEEVTRILDNLPKDCQQLLFSA 201
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/62 (40%), Positives = 42/62 (67%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+FD++ L E + R I +G+E+P+ +Q G+DVI ++++GTGKTA F+I IL+
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILE 80
Query: 224 QI 229
+I
Sbjct: 81 RI 82
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ-F 689
GF +++ + L D Q +L SAT+P D+ ++ R ++ DP IL+ +E ++E I
Sbjct: 178 GFFEEVTRILDNLPKDCQQLLFSATVPADIEQIIRDYLTDPETILLSGDEYSVENIHNVM 237
Query: 690 YIAIE 704
Y A++
Sbjct: 238 YPAVD 242
>UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Maricaulis maris (strain MCS10)
Length = 787
Score = 84.6 bits (200), Expect = 2e-15
Identities = 42/85 (49%), Positives = 57/85 (67%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LI+APTRELA Q+Q+ + L + +C+GG + R + + LE G H+VVGTPGR+
Sbjct: 77 ALIVAPTRELALQVQRELAWLYGEARGQIASCVGGMDPRAERKALERGCHIVVGTPGRLR 136
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D I R AL + +K VLDEADEML
Sbjct: 137 DHIERGALDMSQLKAVVLDEADEML 161
Score = 35.1 bits (77), Expect = 1.8
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 98 GFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
G+ + +Q I +GRD++ AQ+G+GKTA F +++ + +
Sbjct: 19 GYAALTEVQSAVIAEEAEGRDLLVSAQTGSGKTAAFGMAMAKTL 62
Score = 33.5 bits (73), Expect = 5.5
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 659
GF++ + + A + +L SAT+P + +++R F +D +RI E
Sbjct: 164 GFREDLEYILDAAPASRRTLLFSATVPRAIADIARRFQKDALRISTVSE 212
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/87 (44%), Positives = 55/87 (63%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ +L+L PTRELA Q+ + + +G H K A GG ++ IR L GV VV+GTPGR
Sbjct: 75 VQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLRFGVDVVIGTPGR 134
Query: 427 VYDMITRRALHANTIKLFVLDEADEML 507
+ D + R L + +++ VLDEADEML
Sbjct: 135 ILDHLGRSTLDLSQVRMVVLDEADEML 161
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/70 (47%), Positives = 48/70 (68%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF D+ L E++L+ + GFE+PS IQ +AI +QG+DVI QAQ+GTGKTA F + I++
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVE 66
Query: 224 QIDTSIRECQ 253
++ R Q
Sbjct: 67 RLVPGQRAVQ 76
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF + I + + A+ Q +L SATMP ++ ++ +MRDP+ I V ++LT+ I Q++
Sbjct: 164 GFIEDIEKILQNTPAERQTLLFSATMPPEIRRLAGRYMRDPITISVTPQQLTVPQIDQYF 223
Query: 693 IAIELEEWKLETL 731
+ +K E L
Sbjct: 224 CEVR-PSFKTEAL 235
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 83.8 bits (198), Expect = 4e-15
Identities = 42/84 (50%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LI+ PTRELA Q+ V LG +L + A GG + IR L GV V+VGTPGR+ D
Sbjct: 73 LIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRILD 132
Query: 436 MITRRALHANTIKLFVLDEADEML 507
I R+ A IK+ +LDEADEML
Sbjct: 133 HIGRKTFPAAEIKIVILDEADEML 156
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+E F + L LL+ + GFE P+ IQ+ AI ++G +++ QA +GTGKTA + + +
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 218 LQQI 229
LQ+I
Sbjct: 61 LQRI 64
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 83.8 bits (198), Expect = 4e-15
Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Frame = +1
Query: 208 YIDSTTNRYKHS*--MSSLILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDI 378
+I T NR S + +LIL PTRELA Q +V LG H+ N + GGT +R+DI
Sbjct: 90 FIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDDI 149
Query: 379 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSE 513
+L+ VH++VGTPGR+ D+ ++ N +FV+DEAD++LSE
Sbjct: 150 LRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLLSE 194
Score = 80.2 bits (189), Expect = 5e-14
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+D L+ ELL GIY GFE+PS IQ++AI + GRD++A+A++GTGKTA+F I L +
Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNR 97
Query: 227 IDTSIRECQ 253
I+TS+ Q
Sbjct: 98 INTSLSHIQ 106
Score = 36.7 bits (81), Expect = 0.59
Identities = 25/72 (34%), Positives = 35/72 (48%)
Frame = +3
Query: 516 FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYI 695
F I + + QV+L SAT P V E M P I + +ELTL+G+ Q+Y
Sbjct: 196 FMPVIEQTLALCPQERQVMLFSATFPWTVKEFKDQHMVQPYEINLM-DELTLKGVTQYYA 254
Query: 696 AIELEEWKLETL 731
+E E K+ L
Sbjct: 255 YVE-ESQKVHCL 265
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 83.8 bits (198), Expect = 4e-15
Identities = 43/109 (39%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Frame = +1
Query: 190 KNCYFLYIDSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 366
K C F I + +++ L+LAPTRE+A QI VV+A+G + +CH IGG +
Sbjct: 76 KTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPI 135
Query: 367 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSE 513
+D + L+ H+ +G+PGR+ +I AL ++I+LFVLDEAD++L +
Sbjct: 136 SQDKQHLKK-CHIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLED 183
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/61 (42%), Positives = 37/61 (60%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F + L + +L G+ A GF++PS IQ +AI G D+I QA+SGTGKT F+ L
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFTTIALDS 87
Query: 227 I 229
+
Sbjct: 88 L 88
Score = 43.2 bits (97), Expect = 0.007
Identities = 19/59 (32%), Positives = 37/59 (62%)
Frame = +3
Query: 516 FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
F++QI+ ++ L A+ Q++ LSAT P+ + + +MR+P + + + L G+KQ+Y
Sbjct: 189 FQEQINWIYSSLPANKQMLALSATYPESLAQQLSRYMREPTFVRLNPTDPGLLGLKQYY 247
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 82.6 bits (195), Expect = 9e-15
Identities = 39/74 (52%), Positives = 53/74 (71%)
Frame = +2
Query: 17 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKT 196
D+ ++ +T++D LKE+LL+GIY+ GFE PS IQ+ AI I GRD+ AQAQSGTGKT
Sbjct: 30 DSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKT 89
Query: 197 ATFSISILQQIDTS 238
F+++ LQ D S
Sbjct: 90 GAFAVAALQICDMS 103
Score = 70.5 bits (165), Expect = 4e-11
Identities = 40/84 (47%), Positives = 49/84 (58%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+LA TRE+A Q LG + A+ GG+ + D LE H+VVGTPGRV
Sbjct: 110 LVLASTREIAAQNAARFEDLGCFMGARVALLSGGSPIAADKVALEKKPHIVVGTPGRVEH 169
Query: 436 MITRRALHANTIKLFVLDEADEML 507
MI L + IKLFV+DEADEML
Sbjct: 170 MININELSMDNIKLFVIDEADEML 193
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/68 (32%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSA--DVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 686
GF++Q+ +F+ ++ +VQ+ + SAT ++ L VS + +PV I ++ + TL+GI+Q
Sbjct: 196 GFQEQVKSIFRRITNKDEVQIAMFSATYDEEELRVSEEILINPVIIDLRYNDQTLKGIRQ 255
Query: 687 FYIAIELE 710
++I + E
Sbjct: 256 YFIDLRKE 263
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/90 (40%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLN-AKCHACIGGTNVREDIRQLESGVHVVVGTPG 423
+ ++++ PTRELA Q+ ++ I + H+ AK A GGTN+R+D+ +L+ HVV+ TPG
Sbjct: 150 IQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDVMRLDDTGHVVIATPG 209
Query: 424 RVYDMITRRALHANTIKLFVLDEADEMLSE 513
R+ D+I + + +++ VLDEAD++LS+
Sbjct: 210 RILDLIKKCLEKVDHVQMVVLDEADKLLSQ 239
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/62 (45%), Positives = 46/62 (74%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+D LK ELL GI+ G+E PS+IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 142
Query: 227 ID 232
+D
Sbjct: 143 LD 144
>UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=30;
cellular organisms|Rep: DEAD/DEAH box helicase-like
protein - Silicibacter sp. (strain TM1040)
Length = 710
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/85 (45%), Positives = 58/85 (68%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L++APTRELA Q+++ + L A +C+GG ++R++ R LE G H+VV TPGR+
Sbjct: 79 ALVIAPTRELALQVKRELSWLYGDAGAVLASCVGGMDMRDERRALERGAHIVVATPGRLR 138
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D ITR ++ + + VLDEADEML
Sbjct: 139 DHITRGSIDLSGVAAVVLDEADEML 163
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 82.2 bits (194), Expect = 1e-14
Identities = 35/84 (41%), Positives = 58/84 (69%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LIL TR+L ++ +++ALG LN HAC G ++++DI ++ GV +V+GTP RV++
Sbjct: 94 LILQKTRKLTEENAGLIMALGKFLNVSIHACSEGNSIQDDISVVQQGVQIVLGTPDRVFE 153
Query: 436 MITRRALHANTIKLFVLDEADEML 507
++ R+ + +K+ +LDEADEML
Sbjct: 154 LVQRKEISFAHLKMIILDEADEML 177
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/74 (48%), Positives = 51/74 (68%)
Frame = +2
Query: 35 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSIS 214
+ TF+ M L++ELLRGI A+GF +P +QQRA++ IQGRDV+ Q TGKT S+S
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFRSTGKTTVMSLS 79
Query: 215 ILQQIDTSIRECQV 256
+L D S+++ QV
Sbjct: 80 VLSIFDLSVKKIQV 93
Score = 73.7 bits (173), Expect = 4e-12
Identities = 31/73 (42%), Positives = 50/73 (68%)
Frame = +3
Query: 519 KDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIA 698
K ++ +FK L Q +L++AT+ D+L+ F +P+ I+ ++ ELTLEGI+QF+I
Sbjct: 182 KSLVYCIFKYLPPKPQYVLVTATLSQDILDFIEKFFNNPLVIMDKRNELTLEGIQQFFIQ 241
Query: 699 IELEEWKLETLCD 737
++ E+WK ETLCD
Sbjct: 242 VDKEDWKFETLCD 254
>UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 580
Score = 82.2 bits (194), Expect = 1e-14
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Frame = +1
Query: 199 YFLYIDSTTNRYKHS*MSS------LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 360
Y L +DS Y+H S+ LILAPTRELA QI K GD LN IGG
Sbjct: 216 YILSVDSNYLLYEHQQESNFNKPLGLILAPTRELALQITKEAKLFGDKLNLNVVTIIGGH 275
Query: 361 NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
E + + +GVH+VV TPGR+ D + R ++ + F +DEAD+M+
Sbjct: 276 QYEETVHSVRNGVHIVVATPGRLIDSLERGIINLSNCYFFTMDEADKMI 324
Score = 40.3 bits (90), Expect = 0.048
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 98 GFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
G++ P+ IQ+ +I + GRD++ A++G+GKT F + + I
Sbjct: 174 GYDSPTPIQRASIPLALNGRDIVGIAETGSGKTLAFLLPLFSYI 217
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 81.8 bits (193), Expect = 2e-14
Identities = 40/74 (54%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQG--RDVIAQAQSGTGKTATFSI 211
V TF ++NLKE LL+GI A GF KPS IQ+RA+ + I +++IAQ+QSGTGKTATF +
Sbjct: 75 VRTFQELNLKEPLLKGIAAMGFYKPSTIQERALSSLISDNPQNMIAQSQSGTGKTATFLL 134
Query: 212 SILQQIDTSIRECQ 253
++L +I T + CQ
Sbjct: 135 AMLSRIRTDVHYCQ 148
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 81.0 bits (191), Expect = 3e-14
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +1
Query: 190 KNCYFLYIDSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 366
K C F I + ++ LILAPTRE+A QI V+ A+G + +CH IGGT +
Sbjct: 113 KTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPL 172
Query: 367 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSE 513
+D +L+ H+ VG+PGR+ +I L+ +I+LF+LDEAD++L E
Sbjct: 173 SQDKTRLKK-CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEE 220
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/61 (44%), Positives = 37/61 (60%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+SGTGKT FS L
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 124
Query: 227 I 229
+
Sbjct: 125 L 125
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = +3
Query: 516 FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
F++QI+ ++ L A Q++ +SAT P+ + +MRDP + + + +L G+KQ+Y
Sbjct: 223 FQEQINWIYSSLPASKQMLAVSATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYY 281
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 81.0 bits (191), Expect = 3e-14
Identities = 39/88 (44%), Positives = 56/88 (63%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ +++L PTRELA Q+ + + + A GG ++ + QL+ GVH+VVGTPGR
Sbjct: 72 VQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVHIVVGTPGR 131
Query: 427 VYDMITRRALHANTIKLFVLDEADEMLS 510
V D++ R L + +K FVLDEADEMLS
Sbjct: 132 VIDLLERGNLKLDQVKWFVLDEADEMLS 159
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/70 (38%), Positives = 45/70 (64%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F ++ + +E + + GF P+ IQ +AI + GRDV+ Q+Q+GTGKTA FS+ IL+
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63
Query: 224 QIDTSIRECQ 253
++D + Q
Sbjct: 64 RLDPQQKAVQ 73
Score = 39.1 bits (87), Expect = 0.11
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 686
GF D + + D Q L SATMP + + F+R PV + V++ + T I Q
Sbjct: 161 GFIDDVEKILSQAPQDRQTALFSATMPPSIRMLVNKFLRSPVTVTVEQPKATPNKINQ 218
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 81.0 bits (191), Expect = 3e-14
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +1
Query: 190 KNCYFLYIDSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 366
K C F I + ++ LILAPTRE+A QI V+ A+G + +CH IGGT +
Sbjct: 112 KTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPL 171
Query: 367 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSE 513
+D +L+ H+ VG+PGR+ +I L+ +I+LF+LDEAD++L E
Sbjct: 172 SQDKTRLKK-CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEE 219
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/61 (44%), Positives = 37/61 (60%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+SGTGKT FS L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 123
Query: 227 I 229
+
Sbjct: 124 L 124
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = +3
Query: 516 FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
F++QI+ ++ L A Q++ +SAT P+ + +MRDP + + + +L G+KQ+Y
Sbjct: 222 FQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYY 280
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 80.6 bits (190), Expect = 4e-14
Identities = 41/94 (43%), Positives = 56/94 (59%)
Frame = +1
Query: 226 NRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 405
N K + +LIL PTRELA Q+ KV ALG + GG ++ + I + G ++
Sbjct: 63 NTAKEKGIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGANI 122
Query: 406 VVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
+VGTPGR D+I R L+ + + FVLDEADEML
Sbjct: 123 IVGTPGRTLDLIDRGILNFDKVSYFVLDEADEML 156
Score = 52.0 bits (119), Expect = 1e-05
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISIL 220
F++ NL+ EL+ I G+ +P+ +Q AI + G D++ ++++G+GKTA + I I+
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPII 61
Score = 50.4 bits (115), Expect = 5e-05
Identities = 25/73 (34%), Positives = 43/73 (58%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF + I + +L + Q L SAT+P +++E+++ FM + + + K+E+T+ GI Y
Sbjct: 159 GFIEDIKKIINVLPVERQSFLFSATIPSEIIELAKGFMHNEEILFLSKDEVTVNGIDHNY 218
Query: 693 IAIELEEWKLETL 731
A+ E KL TL
Sbjct: 219 -AVSRRERKLRTL 230
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 80.6 bits (190), Expect = 4e-14
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+LAPTRELA+Q++K L+ C GGT + + +RQL+ GV V VGTPGRV D
Sbjct: 182 LVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRQLDYGVDVAVGTPGRVID 239
Query: 436 MITRRALHANTIKLFVLDEADEML 507
++ R AL+ + ++ VLDEAD+ML
Sbjct: 240 LMKRGALNLSEVQFVVLDEADQML 263
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/59 (33%), Positives = 38/59 (64%)
Frame = +2
Query: 53 DMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
++ + E+++ + + G EK IQ+ + ++GRD+I +A++GTGKT F I I+ +I
Sbjct: 108 ELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKI 166
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
VE+F D+ L+EELL+ I GF +PS IQ AI ++GRDVI QAQ+GTGKTA F + +
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPL 63
Query: 218 LQQIDTSIRECQ 253
LQ+ID + R Q
Sbjct: 64 LQRIDAADRSVQ 75
Score = 73.3 bits (172), Expect = 6e-12
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPG 423
+ +L+L PTRELA Q+ + AL HL + + GG + L G VVVGTPG
Sbjct: 74 VQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRRGAQVVVGTPG 133
Query: 424 RVYDMITRRALHANTIKLFVLDEADEML 507
R+ D I R L +++ VLDEADEML
Sbjct: 134 RILDHINRGTLQLGVVRMTVLDEADEML 161
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/63 (33%), Positives = 37/63 (58%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF++ I + + VQ SATMPD +LE++R F+R+P + V + +LT+ +Q +
Sbjct: 164 GFREDIERILSEMPEWVQSAFFSATMPDGILELARRFLREPELLRVTRRQLTVANTEQAW 223
Query: 693 IAI 701
+
Sbjct: 224 FEV 226
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 79.8 bits (188), Expect = 6e-14
Identities = 38/100 (38%), Positives = 64/100 (64%)
Frame = +1
Query: 208 YIDSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 387
Y +++ + +H + +LI+APTRELA QI + V G +L + GG N+ I L
Sbjct: 70 YANTSVSPARHP-VRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQIAAL 128
Query: 388 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
++GV ++V TPGR+ D++ ++A++ + ++ VLDEAD ML
Sbjct: 129 QAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRML 168
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/62 (38%), Positives = 40/62 (64%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF + L E+L + G+ P+ IQ + I + + G+DV+A AQ+GTGKTA F++ +L
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLY 65
Query: 224 QI 229
++
Sbjct: 66 RL 67
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 79.8 bits (188), Expect = 6e-14
Identities = 33/85 (38%), Positives = 54/85 (63%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LIL PTRELA QI + ++ + + +GG N R +R + G ++VV TPGR+Y
Sbjct: 75 ALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGANIVVATPGRLY 134
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D ++R ++ T+++ +LDE+D ML
Sbjct: 135 DFMSRGLINLTTVRMLILDESDRML 159
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F ++ L +L + F +P+ IQ AI + G+D++A AQ+GTGKT F + +Q
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 227 IDTSIRE 247
+ T R+
Sbjct: 64 LSTEPRQ 70
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 79.8 bits (188), Expect = 6e-14
Identities = 35/88 (39%), Positives = 54/88 (61%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ +++APTRELA Q+ + + +G H + GG ++ IR L+ H++VGTPGR
Sbjct: 71 VQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGR 130
Query: 427 VYDMITRRALHANTIKLFVLDEADEMLS 510
+ D I R+ L ++ VLDEADEML+
Sbjct: 131 ILDHINRKTLRLQNVETVVLDEADEMLN 158
Score = 66.9 bits (156), Expect = 5e-10
Identities = 28/64 (43%), Positives = 44/64 (68%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF ++ L + LL+ + + GFE+ + IQ I +QG+D+I QAQ+GTGKTA F + +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 224 QIDT 235
++DT
Sbjct: 63 KVDT 66
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/73 (34%), Positives = 43/73 (58%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF + I + + Q +L SATMPD + ++ FM +P I V+ +E+T+ I+QFY
Sbjct: 160 GFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFY 219
Query: 693 IAIELEEWKLETL 731
+ ++ E+ K + L
Sbjct: 220 LEVQ-EKKKFDVL 231
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 79.4 bits (187), Expect = 9e-14
Identities = 40/87 (45%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
LIL PTRE+A QI+ V+ ++G H+N K + IGG + +D+++ S H+ VG PGRV
Sbjct: 96 LILVPTREIAVQIEDVLRSVGCHVNGLKIESFIGGRPLEDDLKK-SSKCHIAVGAPGRVK 154
Query: 433 DMITRRALHANTIKLFVLDEADEMLSE 513
++ AL N +KLFVLDEAD+++ E
Sbjct: 155 HLLKMGALTTNLVKLFVLDEADKLMEE 181
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = +2
Query: 11 TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTG 190
T D D+ + +F + L +++ +G+ GF+KPS IQ +AI G D+I +++SGTG
Sbjct: 15 TKDVILDENI-SFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFDLIVKSKSGTG 73
Query: 191 KTATFSISILQQIDTSIRECQV 256
KT FS L+ ++T+ QV
Sbjct: 74 KTLVFSTIALETVNTAKDHLQV 95
Score = 35.9 bits (79), Expect = 1.0
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +3
Query: 516 FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 689
F+ I++++ L Q+I+ SAT P ++ +M+ P + + E L G+KQF
Sbjct: 183 FQSDINEIYNSLPPRKQMIVSSATYPQELDTFLANYMQSPTHVTSENETPLLLGLKQF 240
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 79.4 bits (187), Expect = 9e-14
Identities = 35/85 (41%), Positives = 56/85 (65%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
SL+L PTRELA Q++ A +L + A GG ++R +++L+ GV ++V TPGR+
Sbjct: 99 SLVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVSIRPQVKRLQGGVDILVATPGRLL 158
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D+I ++ + + +K+ VLDEAD ML
Sbjct: 159 DLINQKMIRFDNLKVLVLDEADRML 183
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF+ + L E +R I G+ P+ IQ I +QG+D++A AQ+GTGKTA F + I++
Sbjct: 25 TFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIE 84
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 79.4 bits (187), Expect = 9e-14
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
L+L PTREL QQ+ K + ++ A GG + E I++LE+ H++V TPGR+
Sbjct: 74 LVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLETPKHILVATPGRLL 133
Query: 433 DMITRRALHANTIKLFVLDEADEMLS 510
D+I R+A++ + +K +LDEADEML+
Sbjct: 134 DLIARKAVNLSNLKYLILDEADEMLN 159
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQG-RDVIAQAQSGTGKTATFSISIL 220
TF D+ L LL+ + PS IQQ+AI + ++V+ AQ+GTGKTA F + +L
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVL 61
Query: 221 QQIDTSIRECQV 256
QQI+ S+++ QV
Sbjct: 62 QQINPSLQQTQV 73
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 79.4 bits (187), Expect = 9e-14
Identities = 38/85 (44%), Positives = 56/85 (65%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
++LAPTRELA+Q++ + L+ C GGT + + +L GV +VVGTPGR+ D
Sbjct: 105 IVLAPTRELAKQVENEIFITAPTLDTAC--VYGGTPIGQQESKLRRGVDIVVGTPGRIMD 162
Query: 436 MITRRALHANTIKLFVLDEADEMLS 510
++ RRAL + I+ VLDEAD+ML+
Sbjct: 163 LMNRRALDLSEIEFVVLDEADQMLN 187
Score = 44.0 bits (99), Expect = 0.004
Identities = 17/60 (28%), Positives = 36/60 (60%)
Frame = +2
Query: 50 DDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
D+ + E ++ + G + IQQ + + G+DV+ +A++GTGKT FS+ +++++
Sbjct: 28 DNFGMSETTVQALRKRGVDALFPIQQAVLRPAMDGQDVVGRARTGTGKTLAFSLPVIEKL 87
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 79.0 bits (186), Expect = 1e-13
Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG-VHVVVGTPGRV 429
+LILAPTRELA QI+ +LN + A GGT V D++ L G V VV+GTPGR+
Sbjct: 40 ALILAPTRELALQIRDNFRDFARYLNVRTFAFYGGTKVFGDLKVLRGGKVDVVIGTPGRI 99
Query: 430 YDMITRRALHANTIKLFVLDEADEML 507
D+I R AL + ++ FVLDE D ML
Sbjct: 100 KDLIERGALKTDDVRYFVLDEVDVML 125
Score = 38.3 bits (85), Expect = 0.19
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 134 IMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
I +QGRD + QA++GTGKTA F + IL +
Sbjct: 3 IPVALQGRDCLIQAKTGTGKTAAFGLPILNSL 34
Score = 37.9 bits (84), Expect = 0.26
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +3
Query: 516 FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYI 695
FK+ I ++ L + QV +SAT P +V E+S + + P I V+ EL + I++ +
Sbjct: 129 FKEDIDFIYSQLPEEKQVFFVSATFPKEVRELSHRYTKKPEFIKVESRELEPQ-IEERLL 187
Query: 696 AIELEEWKLETLCD 737
+ K+E L D
Sbjct: 188 RVYSIREKIELLED 201
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 79.0 bits (186), Expect = 1e-13
Identities = 38/85 (44%), Positives = 51/85 (60%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
SLI+ PTRELA Q+ V LN + A GG + I QL+ GV V++ TPGR+
Sbjct: 76 SLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGGVRIEPQIAQLQEGVDVLIATPGRLL 135
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D+ +RALH +++ V DEAD ML
Sbjct: 136 DLYEQRALHFENLEILVFDEADRML 160
Score = 52.8 bits (121), Expect = 8e-06
Identities = 23/62 (37%), Positives = 41/62 (66%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F+ + L++EL+ I G+ + IQ+ AI + D++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQ 61
Query: 224 QI 229
++
Sbjct: 62 RL 63
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/89 (40%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGVHVVVGTPG 423
+ ++ILAPTREL QQI +I+ +H + A + GG ++ I +L+ H++V TPG
Sbjct: 73 IQAIILAPTRELGQQIAANLISFAEHTSQVSIATLCGGIPIKPQIERLKEATHIIVATPG 132
Query: 424 RVYDMITRRALHANTIKLFVLDEADEMLS 510
R+ D++ R A+ +I F+LDEADEM++
Sbjct: 133 RLADLVKREAIDIKSISYFILDEADEMVT 161
Score = 41.9 bits (94), Expect = 0.016
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGR-DVIAQAQSGTGKTATFSISILQ 223
F D+ + L + + P+ IQ++ I + + D++A A++GTGKTA F + +LQ
Sbjct: 5 FSDLGINLALQQRLNDLKIITPTEIQEKVIPIVLNDKEDIVALAKTGTGKTAAFGLPLLQ 64
Query: 224 QIDTS 238
ID +
Sbjct: 65 LIDVN 69
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LIL+PTRELA QI + HL +A GG + +R L+ G ++V TPGR+ D
Sbjct: 83 LILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQMRMLDRGTDILVATPGRLLD 142
Query: 436 MITRRALHANTIKLFVLDEADEML 507
+I +RAL +++FVLDEAD+ML
Sbjct: 143 LIDQRALVLKDVEVFVLDEADQML 166
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/65 (33%), Positives = 40/65 (61%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F + L L++ + G+ KP+ IQ +AI ++G+D+ AQ+GTGKTA F++ +
Sbjct: 7 SFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALPSIH 66
Query: 224 QIDTS 238
+ T+
Sbjct: 67 YLATN 71
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF + + K+L + Q + SATMP + E+S F+ DPV + V + T E ++QF
Sbjct: 169 GFIHALRRIDKLLPKNRQTLFFSATMPKTIQELSSQFLSDPVTVSVAPQSSTAERVEQFG 228
Query: 693 IAIELEE 713
I + E
Sbjct: 229 IFVNQSE 235
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++IL+PTRELA QI + ++ G L IGG +R+ +R L GV ++V TPGR+
Sbjct: 179 AIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQMRDLSKGVDILVATPGRLE 238
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D++ ++ L + K VLDEAD+ML
Sbjct: 239 DLVDQKGLRLDETKFLVLDEADQML 263
Score = 52.4 bits (120), Expect = 1e-05
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F + L E+++ + G+ P+ IQ +AI + +D++ AQ+GTGKTA F++ ++QQ
Sbjct: 105 FSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAFALPLIQQ 164
Query: 227 I 229
+
Sbjct: 165 L 165
Score = 40.3 bits (90), Expect = 0.048
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 686
GF + + ++ D Q +L SATM ++ +++ ++ DPV++ V E T++ I+Q
Sbjct: 266 GFLPAVKRIISKVNKDRQTLLFSATMSKEIKKLTETYLTDPVQVSVTPENSTVDKIEQ 323
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/86 (44%), Positives = 53/86 (61%)
Frame = +1
Query: 250 SSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRV 429
++LI+ PTRELA QI + +L + IGGTN+ D++ L +HV+VGTPGR+
Sbjct: 125 TALIVTPTRELALQIDQEFKSLSKGMRLHSATFIGGTNINTDMKVLSRKLHVIVGTPGRL 184
Query: 430 YDMITRRALHANTIKLFVLDEADEML 507
D+ R+ L N +K VLDE D ML
Sbjct: 185 LDLTNRKLLKLNQVKTLVLDEFDRML 210
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/60 (30%), Positives = 38/60 (63%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F ++L ++R + G+E + IQ+++I ++GRD++ + +G+GKT F I I++
Sbjct: 56 SFASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIE 115
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/87 (45%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCI--QGRDVIAQAQSGTGKTATFSI 211
V++F+D+ LK ELL GI + GF KPS+IQ+RA+ + Q +++IAQ+QSGTGKTATF +
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERALPMLLENQPKNLIAQSQSGTGKTATFLL 106
Query: 212 SILQQIDTSIRECQV*SWLPQESWPNK 292
++L +ID + CQ P N+
Sbjct: 107 TMLSKIDVNDPFCQCLCMAPTRELVNQ 133
Score = 47.6 bits (108), Expect = 3e-04
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
L +APTREL QI +V I + + N K I G + DI + + +++GTPG +
Sbjct: 122 LCMAPTRELVNQIAEVAIIMSKFMNNVKITCAIKG--LSPDILEGQINSQIIIGTPGTLK 179
Query: 433 DMIT-RRALHAN--TIKLFVLDEADEML 507
T +L+ N +K+FVLDEAD ++
Sbjct: 180 FWTTDNSSLYFNPKKLKVFVLDEADILI 207
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +3
Query: 564 QVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCD 737
Q++L SAT + V++ + F+ P ++ +ELTL+ IKQFYI ++ E K L D
Sbjct: 228 QILLFSATYDERVMDFAHDFVPQPNEFSIKPQELTLKNIKQFYIQMKSSEDKYPKLID 285
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/88 (39%), Positives = 55/88 (62%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ ++++APTRELA Q+ + + +G AK GG ++ IR L+ +++VGTPGR
Sbjct: 72 IQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPNIIVGTPGR 131
Query: 427 VYDMITRRALHANTIKLFVLDEADEMLS 510
+ D I RR + N + V+DEADEML+
Sbjct: 132 LLDHINRRTIRLNNVNTVVMDEADEMLN 159
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF D NL +L++ I GFE+ + IQ + I + +DVI QAQ+GTGKTA F I +++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 224 QID 232
+I+
Sbjct: 64 KIN 66
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/73 (34%), Positives = 44/73 (60%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF D I + + ++ Q +L SATMP + ++ FM +P + V+ +E+T+ I+QFY
Sbjct: 161 GFIDDIESILSNVPSEHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFY 220
Query: 693 IAIELEEWKLETL 731
+ ++ E K +TL
Sbjct: 221 LEVQ-ERKKFDTL 232
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
LILAPTRE+A QIQ + A+G + + H IGGT D ++L+ H+ VGTPGR+
Sbjct: 38 LILAPTREIAVQIQDTIRAIGCEMEGLRSHVFIGGTLFGPDRQKLKK-CHIAVGTPGRIK 96
Query: 433 DMITRRALHANTIKLFVLDEADEMLSE 513
+I L TI+LFVLDEAD++L +
Sbjct: 97 QLIEYEVLKTGTIRLFVLDEADKLLDD 123
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/62 (32%), Positives = 41/62 (66%)
Frame = +3
Query: 516 FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYI 695
F++Q++ ++ LS + Q++ LSAT P+ + + +MR+P+ + + ++L L GIKQ Y+
Sbjct: 125 FQEQVNWIYNHLSDNKQMLALSATYPEYLAKHLTKYMREPMFVRLNPKDLALRGIKQLYV 184
Query: 696 AI 701
+
Sbjct: 185 EL 186
Score = 36.3 bits (80), Expect = 0.78
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 155 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQV 256
+D+I QA+SGTGKT FS+ L+ ID + QV
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQV 37
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/86 (43%), Positives = 54/86 (62%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+L PTRELA Q+ + +L + H GG ++ E +R LE G ++VGT GRV
Sbjct: 118 ALVLVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIAEQLRNLEQGGEIIVGTTGRVI 177
Query: 433 DMITRRALHANTIKLFVLDEADEMLS 510
D I R +L + ++ F+LDEADEML+
Sbjct: 178 DHIERGSLELSYLRYFILDEADEMLN 203
Score = 50.4 bits (115), Expect = 5e-05
Identities = 23/63 (36%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQG-RDVIAQAQSGTGKTATFSISIL 220
+F+++ L E+ L + GF P+ IQ AI + G ++IA+A++GTGKTA F + ++
Sbjct: 47 SFEELGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGKTAAFGLPLI 106
Query: 221 QQI 229
Q++
Sbjct: 107 QEL 109
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPGRV 429
SLIL PTRELA Q+ + L + A GG ++ IR L++G H+VVGTPGR+
Sbjct: 72 SLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKAGAHIVVGTPGRI 131
Query: 430 YDMITRRALHANTIKLFVLDEADEMLS 510
D + RR L+A+ + +LDEADEML+
Sbjct: 132 IDHLDRRTLNASHLSQIILDEADEMLN 158
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F D+ L E++ I + G+ + + IQ++ I + G+D+ QAQ+GTGKTA F I ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 227 IDTSIRECQ 253
+D SI + Q
Sbjct: 63 VDISINQTQ 71
Score = 46.8 bits (106), Expect = 6e-04
Identities = 19/64 (29%), Positives = 39/64 (60%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF++ I + L + Q +L SAT+ +L +++ F +P I ++++ELT+ ++QFY
Sbjct: 160 GFREDIELILTRLPEERQTVLFSATLAPPILALAKRFQNNPEIIKIERKELTISTVEQFY 219
Query: 693 IAIE 704
++
Sbjct: 220 YLVK 223
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/86 (44%), Positives = 52/86 (60%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LI+ PTREL Q+ + + +G ++ K A GG ++ I QL GVHV+V TPGR+
Sbjct: 74 ALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRRGVHVIVATPGRLI 133
Query: 433 DMITRRALHANTIKLFVLDEADEMLS 510
D I R + I VLDEADEML+
Sbjct: 134 DHIERGTVDLGGISTVVLDEADEMLN 159
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F + ++ ++ R + GFE + IQ + + G DV+ +AQ+GTGKTA F+I +L+
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLEN 65
Query: 227 ID 232
++
Sbjct: 66 LE 67
Score = 36.3 bits (80), Expect = 0.78
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF D I + + Q +L SAT+ +L ++R +MR+P + V+K+ I +FY
Sbjct: 161 GFIDDIERILSHVPERRQTMLFSATVSKPILRIARKYMRNPQVMRVEKKH--SPKIDEFY 218
Query: 693 IAIELEEWKLETL 731
EE K+E L
Sbjct: 219 FKTR-EEDKVELL 230
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/86 (44%), Positives = 53/86 (61%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LILAPTRELA Q+ + + ++ GG ++ IR+L GV +VVGTPGR+
Sbjct: 74 ALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRRGVQIVVGTPGRIL 133
Query: 433 DMITRRALHANTIKLFVLDEADEMLS 510
D I+RR + + VLDEADEML+
Sbjct: 134 DHISRRTIKLENVSYVVLDEADEMLN 159
Score = 70.1 bits (164), Expect = 5e-11
Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQG-RDVIAQAQSGTGKTATFSIS 214
+E+F ++ L +E+L + GF P+ IQ++AI I+G RD++ QAQ+GTGKTA F I
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP 60
Query: 215 ILQQIDTSIRECQ 253
IL+ ID S R Q
Sbjct: 61 ILETIDESSRNTQ 73
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/73 (30%), Positives = 45/73 (61%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF D + ++ K +S + +++L SAT+PD ++++++ +MR+ I V++++LT Q +
Sbjct: 161 GFIDDVEEILKSVSTEKRMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSF 220
Query: 693 IAIELEEWKLETL 731
I + K E L
Sbjct: 221 YEIHSRD-KFELL 232
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 77.8 bits (183), Expect = 3e-13
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPG 423
+ +LILAPTRELAQQI + + HL GG N+ IR + G ++V TPG
Sbjct: 83 VQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIRRGAQIIVATPG 142
Query: 424 RVYDMITRRALHANTIKLFVLDEADEMLS 510
R+ D++ RR + + +K VLDEADEML+
Sbjct: 143 RLMDLMKRREVKLDALKYMVLDEADEMLN 171
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQ-GRDVIAQAQSGTGKTATFSIS 214
++ F+ + L + LL G+ GFE P+ IQQ++I ++ D I AQ+GTGKTA F +
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLP 71
Query: 215 ILQQIDTSIRECQ 253
+L ID + RE Q
Sbjct: 72 LLDLIDVNSREVQ 84
>UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein;
n=10; Alphaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9)
Length = 793
Score = 77.8 bits (183), Expect = 3e-13
Identities = 39/85 (45%), Positives = 54/85 (63%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L +APTRELA Q+ + + L A C+GG + R + R L+ G H+VVGTPGR+
Sbjct: 92 ALAIAPTRELALQVARELGWLYGEAGAHIATCVGGMDYRTERRALDRGAHIVVGTPGRLR 151
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D I R +L + ++ VLDEADEML
Sbjct: 152 DHIERGSLDLSGLRAVVLDEADEML 176
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +2
Query: 74 LLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
L + A G+E + +Q+ + + GRD + AQ+G+GKT F I+I QI
Sbjct: 26 LAAALAAKGYESLTPVQEAVLAEGVAGRDALVSAQTGSGKTVAFGIAIADQI 77
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 77.4 bits (182), Expect = 3e-13
Identities = 34/83 (40%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPG 423
+ +L+L PTRELA Q+ ++ I + HL K A GGTN+R+DI +L+ VHVV+ TPG
Sbjct: 158 IQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGTNLRDDIMRLDETVHVVIATPG 217
Query: 424 RVYDMITRRALHANTIKLFVLDE 492
R+ D++ + + +++ V+DE
Sbjct: 218 RILDLMKKGVAKVDKVQIMVMDE 240
Score = 69.3 bits (162), Expect = 9e-11
Identities = 30/62 (48%), Positives = 46/62 (74%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+D LK ELL GI+ G+EKPS IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLER 150
Query: 227 ID 232
ID
Sbjct: 151 ID 152
Score = 39.5 bits (88), Expect = 0.084
Identities = 24/68 (35%), Positives = 37/68 (54%)
Frame = +3
Query: 528 IHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIEL 707
+ D+ L+ + Q++L SAT P V + ++ P I + EELTL+GI Q+Y A
Sbjct: 280 VEDIISFLAKNRQILLYSATFPISVQKFMAKHLQKPYEINLM-EELTLKGITQYY-AYVT 337
Query: 708 EEWKLETL 731
E K+ L
Sbjct: 338 ERQKVHCL 345
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 77.4 bits (182), Expect = 3e-13
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LIL PTRELA Q++ + L A GG +R + +L+ H+VVGTPGRV
Sbjct: 77 ALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAPHIVVGTPGRVI 136
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D++TRRAL ++ VLDEAD ML
Sbjct: 137 DLMTRRALQLEMLRTVVLDEADRML 161
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
+ DM L E+ + A + +PS IQ I ++GRDV+ QA++GTGKTA F I I+++
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 227 ID 232
++
Sbjct: 66 LE 67
Score = 41.1 bits (92), Expect = 0.028
Identities = 17/64 (26%), Positives = 37/64 (57%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF+ I + + + Q +LLSAT+P + ++++ +MR+P ++ ++ E I+Q Y
Sbjct: 164 GFRPDIEKILRRCPEERQTLLLSATVPPTIEKLAQRYMRNPEKVDFSPTNISAETIEQRY 223
Query: 693 IAIE 704
++
Sbjct: 224 FTVD 227
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/73 (50%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQG-RDVIAQAQSGTGKTATFSIS 214
V+TF+++ LK ELL+G+YA G+ KPS IQ+ A+ IQ ++IAQ+QSGTGKTA F++
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLG 128
Query: 215 ILQQIDTSIRECQ 253
+L +D SI Q
Sbjct: 129 MLNCVDPSINAPQ 141
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/82 (30%), Positives = 46/82 (56%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++ ++PT+ELA Q +V+ +G N K I V +++ V++GTPG++
Sbjct: 142 AICISPTKELALQTFEVISKIGQFSNIKPLLYISEIEVPKNVTN-----QVIIGTPGKIL 196
Query: 433 DMITRRALHANTIKLFVLDEAD 498
+ + ++ L +K+ VLDEAD
Sbjct: 197 ENVIKKQLSVKFLKMVVLDEAD 218
Score = 39.1 bits (87), Expect = 0.11
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 507 VRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP-VRILVQKEELTLEGIK 683
++ +QI + ++L ++V+V L SAT V E+ + ++DP I ++++EL++E I
Sbjct: 223 MKNVPNQIAMINRLLPSNVKVCLFSATFSMGVEELIKKIVQDPYTSIRLKRQELSVEKIH 282
Query: 684 QFYIAIELEEWKLETLCD 737
Q++I E+ K L D
Sbjct: 283 QYFIDCGSEDNKALILSD 300
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 77.4 bits (182), Expect = 3e-13
Identities = 39/85 (45%), Positives = 48/85 (56%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+LAPTRELAQQIQ+V G +NA GG IR LE G +V+ TPGR+
Sbjct: 198 ALVLAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLERGAEIVIATPGRLI 257
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + R + VLDEAD ML
Sbjct: 258 DFLERGITNLRRCTYLVLDEADRML 282
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+ L + +L GF KP+AIQ + + + GRD++ AQ+G+GKT + L
Sbjct: 124 FEQGGLPDYILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYIAPALVH 183
Query: 227 I 229
I
Sbjct: 184 I 184
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 644
GF+ QI + + D QV++ SAT P +V ++ F+ D ++I
Sbjct: 285 GFEPQIRKIMGQIRPDRQVLMWSATWPKEVRNLAEEFLNDYIQI 328
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 77.0 bits (181), Expect = 5e-13
Identities = 40/99 (40%), Positives = 60/99 (60%)
Frame = +1
Query: 211 IDSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 390
+D + NR +H L++APTRELA QI + LG + +K +GG + + L
Sbjct: 63 LDCSINRIQH-----LVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALN 117
Query: 391 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
SGV++VV TPGR+ D++ + + + IK F LDEADE+L
Sbjct: 118 SGVNIVVATPGRLEDLLAQNKIDLSHIKTFTLDEADELL 156
Score = 74.9 bits (176), Expect = 2e-12
Identities = 33/69 (47%), Positives = 46/69 (66%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F MN+K E+L+ + GFEKP+ IQ+ + +G+D+I QAQ+GTGKTA F+I IL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 227 IDTSIRECQ 253
+D SI Q
Sbjct: 63 LDCSINRIQ 71
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 77.0 bits (181), Expect = 5e-13
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LIL PTRELA QI + + A HLN K GG +R L+ GV +++ TPGR+ D
Sbjct: 81 LILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVRALQGGVDILIATPGRLMD 140
Query: 436 MITRRALHANTIKLFVLDEADEML 507
+ ++ L + +++FVLDEAD ML
Sbjct: 141 LHGQKHLKLDRVEIFVLDEADRML 164
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F D+ L L + G+E P+ IQ AI ++G D++ AQ+GTGKTA FS+ ILQ
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQN 65
Query: 227 IDTSIRECQ 253
+ R+ +
Sbjct: 66 LSKHTRKIE 74
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 77.0 bits (181), Expect = 5e-13
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVHVVVGTPG 423
+ +LIL PTRELA Q+ + LG L K A GG + RE LE+GV +VVGTPG
Sbjct: 116 LQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQADALENGVQIVVGTPG 175
Query: 424 RVYDMITRRALHANTIKLFVLDEADEML 507
R+ D + R + + +K VLDEAD+ML
Sbjct: 176 RLADFVGRNRIDLSAVKTVVLDEADKML 203
Score = 56.4 bits (130), Expect = 7e-07
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F + L ELL + GFE + IQQ +I + G+D+I QA++G+GKTA FS+ IL +
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNK 108
Query: 227 ID 232
I+
Sbjct: 109 IN 110
Score = 40.7 bits (91), Expect = 0.036
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTL 671
GF D+I V + L Q +L SAT P+ + +SR + R +++++ EE L
Sbjct: 206 GFADEIKTVMRDLPGSRQTVLFSATFPESIEHLSRKYQRHAQQVIIEDEEQNL 258
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 76.6 bits (180), Expect = 6e-13
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPGRV 429
+L+L PTRELAQQ+ + + G + + + GG ++R+ ++ L G H+VV TPGR+
Sbjct: 80 ALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTHIVVATPGRL 139
Query: 430 YDMITRRALHANTIKLFVLDEADEML 507
D I RR++ I VLDEADEML
Sbjct: 140 LDHIERRSIDLTGINAVVLDEADEML 165
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+ + L + L + + G+E + IQ I ++GRDV+ AQ+GTGKTA F++ IL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 227 IDTSIRECQ 253
ID +R Q
Sbjct: 71 IDVKVRSPQ 79
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/85 (44%), Positives = 49/85 (57%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+LAPTRELAQQIQ+V I G + + + GG + R LE GV +V+ TPGR+
Sbjct: 233 ALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLI 292
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + R VLDEAD ML
Sbjct: 293 DFLERGTTSLKRCTYLVLDEADRML 317
Score = 43.2 bits (97), Expect = 0.007
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F++ + ++ I GF KP+AIQ + + GRD++ AQ+G+GKT + + +
Sbjct: 159 FEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVH 218
Query: 227 IDTSIR 244
I+ R
Sbjct: 219 INNQPR 224
Score = 33.5 bits (73), Expect = 5.5
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 644
GF+ QI + + + D QV++ SAT P +V +++ F+ + +++
Sbjct: 320 GFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQV 363
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 76.2 bits (179), Expect = 8e-13
Identities = 33/89 (37%), Positives = 56/89 (62%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ +LI+ PTRELA Q++ + +G +C A G ++++ I +L+ VH+VV TPGR
Sbjct: 72 IQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVHIVVATPGR 131
Query: 427 VYDMITRRALHANTIKLFVLDEADEMLSE 513
+ D I R ++ +K V+DEAD+M ++
Sbjct: 132 ILDHINRGSIKLENVKYLVIDEADKMFNK 160
Score = 53.6 bits (123), Expect = 5e-06
Identities = 20/70 (28%), Positives = 45/70 (64%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF+ L E++L+ + + G+ PS +Q+ I ++G++++ ++++G+GKTA+F+I + +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 224 QIDTSIRECQ 253
I+ Q
Sbjct: 64 NINVDYNNIQ 73
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 76.2 bits (179), Expect = 8e-13
Identities = 37/97 (38%), Positives = 57/97 (58%)
Frame = +1
Query: 217 STTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 396
S N+ K + +L+L PTRELA Q+ + V G +L + GG + I++L G
Sbjct: 64 SKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHG 123
Query: 397 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
V V+V TPGR+ D++ + + N +++ VLDEAD ML
Sbjct: 124 VDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRML 160
Score = 53.2 bits (122), Expect = 6e-06
Identities = 23/60 (38%), Positives = 39/60 (65%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F + L + + + G++ PS IQ +AI + G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF I + +L A Q ++ SAT D++ E+++ + PV I V +KQ+
Sbjct: 163 GFIRDIKKILALLPAKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWI 222
Query: 693 IAIE 704
++
Sbjct: 223 CPVD 226
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 76.2 bits (179), Expect = 8e-13
Identities = 35/85 (41%), Positives = 55/85 (64%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
+I++PTRELA Q + + +LG A AC+GG ++ D++ L+ G+H V GTPGR+
Sbjct: 92 IIVSPTRELAIQTENTLKSLG----ANTRACVGGNSLGADVKALQKGIHCVSGTPGRILQ 147
Query: 436 MITRRALHANTIKLFVLDEADEMLS 510
++ + A ++ VLDEADEML+
Sbjct: 148 LLKEHNIQAEKVQSVVLDEADEMLT 172
Score = 69.7 bits (163), Expect = 7e-11
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = +2
Query: 32 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSI 211
+V T++ M LK EL+ I G+EKPS IQQRAI QG++++ Q+Q+G+GKTATFSI
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGKTATFSI 76
Query: 212 SILQQI 229
L ++
Sbjct: 77 GTLARL 82
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/78 (38%), Positives = 50/78 (64%)
Frame = +3
Query: 504 VVRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIK 683
++ FK I D+ + L Q ++++AT+ DV+E++ +R+ V I V ++ELTL GI
Sbjct: 170 MLTSFKSTIMDILQKLP-HAQKVIVTATVSADVVELATAHLRNSVEIRVPRDELTLTGID 228
Query: 684 QFYIAIELEEWKLETLCD 737
Q+ + +E EEWK +TL D
Sbjct: 229 QYVVRVENEEWKFDTLID 246
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 76.2 bits (179), Expect = 8e-13
Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 DPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MTCIQGRDVIAQA 175
DP + +W V+ FD M+L LL+G+Y+YGF PS IQ AI + R VIAQA
Sbjct: 79 DPNFIP-NWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQA 137
Query: 176 QSGTGKTATFSISILQQIDTSIRECQ 253
QSGTGKT FSI +L +ID S + Q
Sbjct: 138 QSGTGKTGAFSIGVLSKIDVSQKTTQ 163
Score = 75.8 bits (178), Expect = 1e-12
Identities = 32/74 (43%), Positives = 49/74 (66%)
Frame = +3
Query: 516 FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYI 695
F +Q++D+ + DVQ++L SAT+ + + FM DP RIL++KE+LTLEGIKQFY+
Sbjct: 254 FIEQVNDIMEYFPEDVQILLFSATISQSIFHIMNTFMNDPFRILIKKEQLTLEGIKQFYV 313
Query: 696 AIELEEWKLETLCD 737
++ K + L D
Sbjct: 314 DVQETSNKFDCLLD 327
Score = 59.7 bits (138), Expect = 7e-08
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHAC-IGGTNVREDIR-QLESGVHVVVGTPGR 426
+L+LAPTRELA QI V +G + A IGG D + + S H+ + TPGR
Sbjct: 164 ALVLAPTRELATQIFNVFKEIGSRIPGLDIAIFIGGAQRVVDAQARAASHPHICICTPGR 223
Query: 427 VYDMITRRALHANTIKLFVLDEADEMLSE 513
D+I L K+ VLDEAD+MLS+
Sbjct: 224 ALDLIVSGHLRVQNFKMAVLDEADQMLSD 252
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 76.2 bits (179), Expect = 8e-13
Identities = 38/92 (41%), Positives = 55/92 (59%)
Frame = +1
Query: 235 KHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVG 414
K+S + +L++APTRELA Q+ + + +G + GG ++ IR L+ HV+VG
Sbjct: 67 KNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPHVIVG 126
Query: 415 TPGRVYDMITRRALHANTIKLFVLDEADEMLS 510
TPGR+ D I R L + VLDEADEML+
Sbjct: 127 TPGRIIDHINRGTLRLEHVHTVVLDEADEMLN 158
Score = 63.7 bits (148), Expect = 5e-09
Identities = 27/63 (42%), Positives = 44/63 (69%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF ++ L +E+++ I GFE+ + IQ + I +Q +DVI QAQ+GTGKTA F I I++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 224 QID 232
+++
Sbjct: 63 KVN 65
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/73 (32%), Positives = 44/73 (60%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF + I + + A+ Q +L SATMPD + ++ FM +P + V+ +E+T+ I+Q+Y
Sbjct: 160 GFIEDIEAILSHVPAERQTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYY 219
Query: 693 IAIELEEWKLETL 731
+ + E+ K + L
Sbjct: 220 LEVH-EKKKFDIL 231
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 75.8 bits (178), Expect = 1e-12
Identities = 41/86 (47%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVHVVVGTPGRV 429
+LILAPTRELA Q+ + L + N GG ++QL SG VVVGTPGR+
Sbjct: 77 ALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLRSGAQVVVGTPGRI 136
Query: 430 YDMITRRALHANTIKLFVLDEADEML 507
D I + L N +K F+LDEADEML
Sbjct: 137 LDHIDKGTLLLNNLKTFILDEADEML 162
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/75 (40%), Positives = 40/75 (53%)
Frame = +2
Query: 29 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFS 208
+Q + F N L + + F PS IQ + I +QGRD IA AQ+GTGKTA F+
Sbjct: 2 NQEISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFA 61
Query: 209 ISILQQIDTSIRECQ 253
+ ILQ + I Q
Sbjct: 62 LPILQNLSPEISTTQ 76
Score = 41.5 bits (93), Expect = 0.021
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF + + + + L Q+ L SATMP + +++ ++ DP I ++ E T++ I+Q +
Sbjct: 165 GFIEDVETILEKLPEKKQMALFSATMPYRIRQIANTYLNDPASIEIRMETATVKSIEQRF 224
Query: 693 I 695
+
Sbjct: 225 L 225
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/86 (43%), Positives = 51/86 (59%)
Frame = +1
Query: 250 SSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRV 429
S+L+L PTRELA Q+ + + G L GG + + +R L+ GV VVV TPGR
Sbjct: 109 SALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQLRVLKRGVDVVVATPGRA 168
Query: 430 YDMITRRALHANTIKLFVLDEADEML 507
D + R+ L +++ VLDEADEML
Sbjct: 169 LDHLQRKTLKLEQVRVVVLDEADEML 194
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/62 (40%), Positives = 43/62 (69%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF+ + L L+ + A G+E+P+ IQ+ A+ ++G+D++ A +GTGKTA FS+ +LQ
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLPLLQ 96
Query: 224 QI 229
+I
Sbjct: 97 RI 98
Score = 33.9 bits (74), Expect = 4.2
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEEL 665
GF + + + Q L SAT+P + ++ +R+PVR+ + +E++
Sbjct: 197 GFAEDLEAILSSTPEKRQTALFSATLPPRIASIAERHLREPVRVRIAREKV 247
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/97 (39%), Positives = 58/97 (59%)
Frame = +1
Query: 217 STTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 396
S N+ K + +L+L PTRELA Q+ + V G +L + GG + I++L G
Sbjct: 64 SKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHG 123
Query: 397 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
V V+V TPGR+ D+ ++A+ N +++ VLDEAD ML
Sbjct: 124 VDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRML 160
Score = 54.0 bits (124), Expect = 4e-06
Identities = 23/60 (38%), Positives = 39/60 (65%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F + L + + + G++ PS IQ +AI + G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Score = 36.3 bits (80), Expect = 0.78
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF I + ML A Q ++ SAT D++ E+++ + PV I V +KQ+
Sbjct: 163 GFIRDIKKILAMLPAKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWI 222
Query: 693 IAIE 704
++
Sbjct: 223 CPVD 226
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/86 (40%), Positives = 53/86 (61%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+L+PTRELA Q+ + + LG + GG + R I ++ G H+VV TPGR+
Sbjct: 116 ALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGIKRGAHIVVATPGRLV 175
Query: 433 DMITRRALHANTIKLFVLDEADEMLS 510
D + ++ + ++K VLDEADEMLS
Sbjct: 176 DFLEQKMIKLQSVKTVVLDEADEMLS 201
Score = 52.8 bits (121), Expect = 8e-06
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQG-RDVIAQAQSGTGKTATFSIS 214
V+ F+ L ++ + GF P+ IQ++A+ + G D I A +GTGKTA F I
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIP 102
Query: 215 ILQQIDTSIRECQ 253
+++ ID+++++ Q
Sbjct: 103 LIENIDSTVKDTQ 115
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/95 (41%), Positives = 52/95 (54%)
Frame = +1
Query: 223 TNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 402
TN K + SLI+ PTRELA QI + A G H GG N L+ G+
Sbjct: 149 TNEKKRK-IRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNPQTASLQKGID 207
Query: 403 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
+++ TPGR+ D++ + LH I+ FVLDEAD ML
Sbjct: 208 ILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRML 242
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F + + E +L+ I G++ P+ IQ AI + G D++ AQ+GTGKTA F+I +LQ
Sbjct: 84 FRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIPVLQL 143
Query: 227 ID 232
++
Sbjct: 144 LN 145
Score = 33.1 bits (72), Expect = 7.3
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 528 IHDVFKMLSA---DVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 686
IHD+ K+L+ Q + SATMP ++ ++ + +PV + V T+E I Q
Sbjct: 247 IHDIRKILAELPKKKQSLFFSATMPPEITRLAASILHNPVEVSVTPVSSTVEIINQ 302
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+L+PTRELA QI + G H+ GG ++ L +GV VVV TPGR+ D
Sbjct: 142 LVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKALAAGVDVVVATPGRLMD 201
Query: 436 MITRRALHANTIKLFVLDEADEML 507
+ ++ H N +++FVLDEAD+ML
Sbjct: 202 HLGEKSAHLNGVEIFVLDEADQML 225
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F D+ L + LL+ + G+ P+ IQ +AI + GRD++ AQ+GTGKTA F++ IL +
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 227 I 229
+
Sbjct: 127 L 127
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF I + L + Q + SATMP ++ +++ +++P ++ + T+E I Q
Sbjct: 228 GFVVPIRKIASQLPKERQNLFFSATMPSEIGKLAGELLKNPAQVAITPSATTVERIDQSL 287
Query: 693 IAIELE 710
I IE +
Sbjct: 288 IFIEAQ 293
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNA--KCHACIGGTNVREDIRQLESGVHVVVGTPGRV 429
L+L PTRELAQQ+ ++ H N K A GG +V ++ L +G V+V TPGR+
Sbjct: 87 LVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQMQSLRAGADVLVATPGRL 146
Query: 430 YDMITRRALHANTIKLFVLDEADEMLS 510
D++ AL N + VLDEAD MLS
Sbjct: 147 LDLLASNALKLNRVLALVLDEADRMLS 173
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
V +F ++ + L + + P+ IQ I + GRDV+A A +G+GKTA F++ +
Sbjct: 8 VASFAELGIIAPLCNRLTELTYAAPTPIQAATIPAVLSGRDVLAGANTGSGKTAAFAVPL 67
Query: 218 LQQI 229
LQ++
Sbjct: 68 LQRL 71
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/84 (45%), Positives = 51/84 (60%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++IL PTRELA Q+ + GD L K GGT++ I LE GV V+V TPGR+
Sbjct: 135 AVILTPTRELAMQVADALQPYGDVLGLKMKVVCGGTSMGNQIYALERGVDVLVATPGRLR 194
Query: 433 DMITRRALHANTIKLFVLDEADEM 504
D+I R A +++ VLDEAD+M
Sbjct: 195 DIINRGACSLENVQIAVLDEADQM 218
Score = 42.7 bits (96), Expect = 0.009
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISIL 220
TF D+ L E ++R + G P IQ I + G+D++ + ++G+GKT +F + L
Sbjct: 62 TFADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTL 120
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/85 (42%), Positives = 50/85 (58%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++++ PTRELA Q+ L + + GG N+ +RQLE+G +VVGTPGRV+
Sbjct: 117 AIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKNMNRQLRQLENGTQLVVGTPGRVH 176
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + R L N + VLDEAD ML
Sbjct: 177 DHLQRGTLRTNNVWCVVLDEADRML 201
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/72 (44%), Positives = 49/72 (68%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+++FD+++L + R + GF PS IQ I + G+DVI QA++GTGKTA FSI I
Sbjct: 43 MDSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPI 102
Query: 218 LQQIDTSIRECQ 253
L+Q+D S+ +C+
Sbjct: 103 LEQLD-SLEDCR 113
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/67 (31%), Positives = 39/67 (58%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF+ QI + + + Q +LLSAT+P V ++ +M +PV I ++E+ ++ I+Q Y
Sbjct: 204 GFRPQIERIMRKCPRNRQTLLLSATLPPVVRRLAESYMHEPVVIDCCRDEMAVDTIEQRY 263
Query: 693 IAIELEE 713
I ++
Sbjct: 264 FTIAQDD 270
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALG-DHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++LAPTRELA Q+ + + + G D + GG + +QLE G VVVGTPGR+
Sbjct: 87 MVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQLERGAQVVVGTPGRLM 146
Query: 433 DMITRRALHANTIKLFVLDEADEMLS 510
D + R++L + +++ VLDEADEML+
Sbjct: 147 DHLRRKSLKLDELRVCVLDEADEMLN 172
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/70 (41%), Positives = 43/70 (61%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F + L E LL + + GF + IQ I + G+DV+ +AQ+GTGKTA F + L +
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAK 76
Query: 227 IDTSIRECQV 256
IDTSI++ Q+
Sbjct: 77 IDTSIKKPQL 86
Score = 34.3 bits (75), Expect = 3.2
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 689
GF + I + + Q+ L SATMP + +++ F++DP I V + I Q+
Sbjct: 174 GFLEDIQWILDHIPKTAQMCLFSATMPPAIRKIANRFLKDPEHIKVAAVKKAKANITQY 232
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/87 (44%), Positives = 52/87 (59%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LIL PTRELA Q+ + L H K A GG ++++ LE G ++VGTPGRV+
Sbjct: 100 ALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMKQQEDALEEGTPIIVGTPGRVF 159
Query: 433 DMITRRALHANTIKLFVLDEADEMLSE 513
D I R L + VLDEADEML++
Sbjct: 160 DHINRGNLKLDACDHAVLDEADEMLNQ 186
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
FDDMNL E + + G+ P+ +Q RA I+G+D+I ++++GTGKTA F + +L++
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 227 IDTSIR 244
I R
Sbjct: 91 IPADER 96
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 74.9 bits (176), Expect = 2e-12
Identities = 42/85 (49%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
L+LAPTRELAQQ+ V + H N K + GG++ R L+ G VVGTPGRV
Sbjct: 78 LVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQWVVGTPGRVM 137
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D I R L I+ VLDEADEML
Sbjct: 138 DHIRRGTLKLEGIRAVVLDEADEML 162
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/70 (42%), Positives = 46/70 (65%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F + L LLR I G+E+PS IQ+++I ++G+DV+ AQ+GTGKTA F++ +L +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 227 IDTSIRECQV 256
+RE QV
Sbjct: 68 TQNEVREPQV 77
Score = 39.9 bits (89), Expect = 0.064
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF D + V + Q+ L SATMP + V+ +R+P I ++ + T E I+Q Y
Sbjct: 165 GFIDDVDWVLDQVPEKRQIALFSATMPKQIKAVAEKHLREPTEIRIKSKTATNESIEQKY 224
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 74.9 bits (176), Expect = 2e-12
Identities = 33/87 (37%), Positives = 54/87 (62%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ +LI+ PTRELA QI L + A GG +V + +R+L+ +H+++GTPGR
Sbjct: 72 IQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKGSIHIIIGTPGR 131
Query: 427 VYDMITRRALHANTIKLFVLDEADEML 507
+ D + R+ ++ + + VLDEAD+ML
Sbjct: 132 LLDHLRRKTINLGKLSMLVLDEADQML 158
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/62 (35%), Positives = 38/62 (61%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F + + EE+ + +P+ +Q +AI + RDV+AQAQ+GTGKT F + IL++
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 227 ID 232
++
Sbjct: 65 VN 66
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF + D+ + Q + SATMP+ V ++ +M+DPV+I VQ + +TL+ I+Q
Sbjct: 161 GFLRDVEDIMTHIPKRRQNMFFSATMPNQVRTLAEQYMKDPVQIQVQSKRVTLDEIRQVV 220
Query: 693 IAIELEEWKLETLC 734
I + K + LC
Sbjct: 221 IE-TTDRGKQDLLC 233
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/85 (42%), Positives = 52/85 (61%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+LAPTRELA QI A G HL + GG ++ L+ G H++V TPGR+
Sbjct: 78 ALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVKALKRGAHILVATPGRLL 137
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D++ + + N +++FVLDEAD ML
Sbjct: 138 DLMNQGHIKLNQLEVFVLDEADRML 162
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/70 (32%), Positives = 42/70 (60%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+ TF ++ L + + + ++ P+ IQ + I ++GRDV+ AQ+GTGKTA ++ I
Sbjct: 1 MNTFQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPI 60
Query: 218 LQQIDTSIRE 247
L Q+ + R+
Sbjct: 61 LNQLGKNSRK 70
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/94 (38%), Positives = 55/94 (58%)
Frame = +1
Query: 226 NRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 405
NR L+LAPTREL QI G K + +GGT+V +D +L G +
Sbjct: 69 NRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRNKLHRGTDI 128
Query: 406 VVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
++ TPGR+ D+I ++A + ++++ VLDEAD+ML
Sbjct: 129 LIATPGRLLDLIDQKAFNLGSVEVLVLDEADQML 162
Score = 54.4 bits (125), Expect = 3e-06
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATF---SISI 217
F D+ L + +L+ + G+ P+ IQ++AI ++GRD++ AQ+GTGKTA F SI
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 218 LQQIDTSI 241
L++ D I
Sbjct: 64 LREADNRI 71
Score = 39.5 bits (88), Expect = 0.084
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF + + +++ + Q + SATMP + E+ + +PV++ V E T E I Q+
Sbjct: 165 GFVHALRRISQLVPKERQTLFFSATMPKAIKELVSGYCNNPVQVSVTPESTTAERIDQYL 224
Query: 693 IAIELEE 713
++ +E
Sbjct: 225 FMVQQDE 231
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/84 (45%), Positives = 49/84 (58%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+LAPTRELA QI + + GG N E +R+L+ G H++V TPGR+ D
Sbjct: 382 LVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLED 441
Query: 436 MITRRALHANTIKLFVLDEADEML 507
MITR + I+ VLDEAD ML
Sbjct: 442 MITRGKVGLENIRFLVLDEADRML 465
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/64 (40%), Positives = 42/64 (65%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+ +FDD+ L E + + ++KP+ +Q+ AI I GRD++A AQ+G+GKTA F + I
Sbjct: 294 ITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPI 353
Query: 218 LQQI 229
L Q+
Sbjct: 354 LNQM 357
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/87 (41%), Positives = 52/87 (59%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ +LIL PTRELA Q+ + L H + GG ++ I+ L+ GV VV+GTPGR
Sbjct: 74 VQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKALKQGVQVVIGTPGR 133
Query: 427 VYDMITRRALHANTIKLFVLDEADEML 507
+ D + R+ L + + +LDEADEML
Sbjct: 134 IIDHLRRKTLILDHVNTVILDEADEML 160
Score = 66.9 bits (156), Expect = 5e-10
Identities = 29/63 (46%), Positives = 44/63 (69%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+++ + EE+ + I GFE+PS IQ +AI + G DVI QAQ+GTGKTA F I ++++
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVEK 67
Query: 227 IDT 235
+ T
Sbjct: 68 VST 70
Score = 59.7 bits (138), Expect = 7e-08
Identities = 28/74 (37%), Positives = 44/74 (59%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF D I + + + + Q +L SATMP + ++SR +M DP + + + E+T I QFY
Sbjct: 163 GFIDDIESILRQVKNERQTLLFSATMPPAIKKLSRKYMNDPQTVSINRREVTAPSIDQFY 222
Query: 693 IAIELEEWKLETLC 734
+ LE KL++LC
Sbjct: 223 YKV-LERNKLDSLC 235
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+++L+L PTRELAQQ+ + + GG ++ E IRQL +G H++V TPGR
Sbjct: 84 ITALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGGVSIGEQIRQLANGTHILVATPGR 143
Query: 427 VYDMITRRALHANTIKLFVLDEADEML 507
+ D++ +RAL + + V DEAD ML
Sbjct: 144 LLDLLRKRALSLSQLTHLVFDEADRML 170
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F D++L L+ + +++P+ IQ +AI + G+DV+A AQ+GTGKTA F++ +L
Sbjct: 2 SFADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLLH 61
Query: 224 QIDT 235
Q+ T
Sbjct: 62 QLLT 65
Score = 43.6 bits (98), Expect = 0.005
Identities = 26/74 (35%), Positives = 37/74 (50%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GFKD+I +V K L + Q +L SAT+ D +L SR +R P I V + T I +
Sbjct: 173 GFKDEIVEVLKRLPSTRQTLLFSATLDDRMLSFSRRLLRSPQVIEVAQRNTTASSIVERV 232
Query: 693 IAIELEEWKLETLC 734
++ K LC
Sbjct: 233 FNVDANR-KCAMLC 245
>UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=2; Proteobacteria|Rep: ATP-dependent
RNA helicase, DEAD box family protein - Alteromonas
macleodii 'Deep ecotype'
Length = 441
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/85 (40%), Positives = 53/85 (62%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LILAPTRELA+Q+ ++ LN C +GG N + ++ L H++VGT GRV
Sbjct: 76 ALILAPTRELAKQVFIEAKSMCTGLNLTCSLIVGGENYNDQVKALRRNPHIIVGTAGRVA 135
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + ++++ N ++L + DEAD ML
Sbjct: 136 DHLLDKSVYLNGLELLIFDEADRML 160
Score = 39.9 bits (89), Expect = 0.064
Identities = 15/59 (25%), Positives = 36/59 (61%)
Frame = +2
Query: 53 DMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
D+ + +++ + + + IQ+R ++ IQG+D+IA +++G+GKT F + + ++
Sbjct: 5 DLPVHHKIISKLESKNISTLTEIQERTMLPAIQGKDIIASSKTGSGKTFAFLVPAINRL 63
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNA------KCHACIGGTNVREDIRQLESGVHVVVGT 417
LI+ P+RELA+QI ++I + D L + CIGG + E + + G+H+VV T
Sbjct: 270 LIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVAT 329
Query: 418 PGRVYDMITRRALHANTIKLFVLDEADEML 507
PGR+ DM+T++ ++ + VLDEAD ML
Sbjct: 330 PGRLSDMLTKKIINLEVCRYLVLDEADRML 359
Score = 39.5 bits (88), Expect = 0.084
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAY-GFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSIS 214
+ +F +M + LL + G P+AIQ + I + GRD+I A +G+GKT TF +
Sbjct: 188 IGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLP 247
Query: 215 IL 220
++
Sbjct: 248 LV 249
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 650
GF+D+I +F A Q +L SATMP + ++ + P+ + V
Sbjct: 362 GFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPIVVNV 407
>UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|Rep:
DEAD-box RNA helicase - Athelges takanoshimensis
Length = 124
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/97 (39%), Positives = 56/97 (57%)
Frame = +1
Query: 217 STTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 396
S T K+ + +L+L P+RELA QI + V HL+ K GG I+ L G
Sbjct: 23 SETKHPKYRPVRALVLTPSRELAAQILENVKEYSTHLDIKSTVVFGGVKASGQIKTLRQG 82
Query: 397 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
V ++V TPGR+ D+ +++A+ N I + +LDEAD ML
Sbjct: 83 VDILVATPGRLLDLHSQKAVSFNRIDVLILDEADRML 119
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
LI+APTREL QI + H+ + A GG+N++E R++ G +VV TPGR+
Sbjct: 74 LIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISRGAQIVVATPGRMQ 133
Query: 433 DMITRRALHANTIKLFVLDEADEMLS 510
DM+ RR + + VLDEADEML+
Sbjct: 134 DMMRRRMVDITKLSYCVLDEADEMLN 159
Score = 65.7 bits (153), Expect = 1e-09
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCI-QGRDVIAQAQSGTGKTATFSISIL 220
TFD + L LL+ I GFE PS IQ+ AI + + RD++A AQ+GTGKTA F +L
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLL 61
Query: 221 QQIDTSIRECQ 253
Q ID S + Q
Sbjct: 62 QNIDASSKTTQ 72
Score = 35.9 bits (79), Expect = 1.0
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF + I ++ D L SATMP +V +++ FM DP+ I V + + + Y
Sbjct: 161 GFYEDITNILADTPEDKLTWLFSATMPREVARIAKEFMHDPLEITVGHKNEGAKNVSHEY 220
Query: 693 IAIELEE 713
+ +
Sbjct: 221 YVVHTRD 227
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/62 (51%), Positives = 51/62 (82%)
Frame = +3
Query: 525 QIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 704
+I+++F++L +QV + SATMP +VLE+++ F+ PVRILV++EELTLEGI+QF++ +E
Sbjct: 110 KIYEIFQLLPERIQVGVFSATMPPEVLEITKKFINKPVRILVKREELTLEGIRQFHVNVE 169
Query: 705 LE 710
E
Sbjct: 170 RE 171
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/67 (52%), Positives = 44/67 (65%)
Frame = +2
Query: 53 DMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQID 232
D N+ L + G EKPSAIQQ+ I+ +G DVI QAQSGTGKTATF ILQQ++
Sbjct: 16 DSNMNGLCLLNVLCEGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLN 75
Query: 233 TSIRECQ 253
+ +CQ
Sbjct: 76 EELTQCQ 82
Score = 49.6 bits (113), Expect = 8e-05
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCH 342
+L+LAPTRELAQQI+KV+ ALGDHLN K +
Sbjct: 83 ALVLAPTRELAQQIEKVMRALGDHLNVKIY 112
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/64 (56%), Positives = 43/64 (67%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F D LK ELLR I GFE PS +QQ I I G D++ QA+SG GKTA F +SILQQ
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQ 116
Query: 227 IDTS 238
+DT+
Sbjct: 117 LDTN 120
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Frame = +1
Query: 262 LAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL-ESGV-HVVVGTPGRVY 432
LA TRELA QI+ +L N +C GG ++ + I+ E + H+++GTPGR+
Sbjct: 149 LAHTRELAYQIKNEFDRFSKYLKNVRCEVVYGGISMNKHIKLFKEDNIPHIIIGTPGRIL 208
Query: 433 DMITRRALHANTIKLFVLDEADEMLSEV 516
+I + L + I+ FVLDE D+ L ++
Sbjct: 209 ALIREKYLITDKIQHFVLDECDKCLEKL 236
Score = 38.7 bits (86), Expect = 0.15
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 519 KDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE-ELTLEGIKQFYI 695
+ + +F QV+ SATM ++ +V + F+++PV I + E +L L G+ Q Y+
Sbjct: 239 RSDVQKIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYV 298
Query: 696 AIE 704
++
Sbjct: 299 KLQ 301
>UniRef50_A7RMK9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 867
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Frame = +1
Query: 250 SSLILAPTRELAQQIQKVVIALGDHL---NAKCHACIGGTNVREDIRQLESGVHVVVGTP 420
S++I+ P+RELA Q + +HL K +GG N ++ IRQL GV +V GTP
Sbjct: 302 SAIIIEPSRELAHQTHAQIHLFQNHLPQPKVKPVLLVGGENAKDQIRQLNDGVDIVTGTP 361
Query: 421 GRVYDMITRRALHANTIKLFVLDEADEMLSE 513
G++ D IT + + +K F+LDEAD +L++
Sbjct: 362 GKLNDFITTDKISLHQVKFFILDEADGLLAQ 392
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F + + E+ + + + P+ +Q AI + G DV+ A++G+GKT F + ++Q
Sbjct: 5 FSEFGMLPEICKAVEDMDWLLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPVIQI 64
Query: 227 IDTSIREC--QV*SWLPQESWPNKFR 298
+ +IR+ S P S P+ F+
Sbjct: 65 VHETIRDALSGKVSKAPSVSGPSTFK 90
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/88 (42%), Positives = 51/88 (57%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ SLILAPTRELA Q+ + + + GG + I+ L+ G +VVGTPGR
Sbjct: 70 VQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGR 129
Query: 427 VYDMITRRALHANTIKLFVLDEADEMLS 510
V D + RR L + I +LDEADEM++
Sbjct: 130 VIDHLNRRTLKTDGIHTLILDEADEMMN 157
Score = 56.0 bits (129), Expect = 9e-07
Identities = 20/64 (31%), Positives = 44/64 (68%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
++ F ++ + + ++ + + GF++P+ IQ+ +I +QG D++ QAQ+GTGKT F I +
Sbjct: 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60
Query: 218 LQQI 229
++++
Sbjct: 61 IEKV 64
Score = 35.9 bits (79), Expect = 1.0
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 513 GFKDQIHDVF-KMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 689
GF D + + K+ + Q +L SATMP + + + FM+ P I E++ I++F
Sbjct: 159 GFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEF 218
Query: 690 Y-IAIELEEW 716
Y I ELE++
Sbjct: 219 YTIVKELEKF 228
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+L+PTRELA QI+K ++ ++ K C GG+N+ I +L+ GV+V+V TPGR+ D
Sbjct: 465 LVLSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVATPGRLID 524
Query: 436 MITRRALHANTIK---LFVLDEADEM 504
++ T++ VLDEAD M
Sbjct: 525 LLAANGGRITTLRRTTFVVLDEADRM 550
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/48 (39%), Positives = 32/48 (66%)
Frame = +2
Query: 98 GFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQIDTSI 241
GF KPS IQ +AI + GRD+I A++G+GKT ++ + +++ I +
Sbjct: 407 GFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQL 454
Score = 39.9 bits (89), Expect = 0.064
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF+ QI +F + D Q +L SAT P + ++++ + +P+ I+V + I Q
Sbjct: 554 GFEPQIQKIFTQIRPDKQTVLFSATFPRKLEQLAKKVLHNPIEIIVGGVSVVASEISQEI 613
Query: 693 IAIE 704
I E
Sbjct: 614 ILFE 617
>UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2;
Lactobacillus|Rep: ATP-dependent RNA helicase -
Lactobacillus plantarum
Length = 444
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/87 (40%), Positives = 56/87 (64%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LILAP++ELA Q VV G ++AK A GG NV+ + +L+ V+VGTPGR+
Sbjct: 64 ALILAPSQELAMQTTNVVREWGQLIDAKVLAITGGANVKRQMEKLKKHPEVIVGTPGRIT 123
Query: 433 DMITRRALHANTIKLFVLDEADEMLSE 513
++I + +K+ ++DEADE+L++
Sbjct: 124 NLIADGKIKLGHLKMMIVDEADELLTD 150
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 73.7 bits (173), Expect = 4e-12
Identities = 34/91 (37%), Positives = 55/91 (60%)
Frame = +1
Query: 235 KHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVG 414
+H+ +S L++APTRELA QI +V +G + + GG I + G+ ++V
Sbjct: 70 EHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRTVCITGGVEQEAQIAAADYGIDILVA 129
Query: 415 TPGRVYDMITRRALHANTIKLFVLDEADEML 507
TPGR++D+I ++ + +K+ VLDEAD ML
Sbjct: 130 TPGRMFDLIYQKHIKITRVKILVLDEADHML 160
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+ +L + + + GF +P+ IQ ++I + G DV+A AQ+GTGKTA F I +L
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 227 I 229
+
Sbjct: 63 L 63
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/67 (25%), Positives = 36/67 (53%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF I DV K L A Q + SAT+ +++ +++ +++P+RI + ++ + I
Sbjct: 163 GFIKDIQDVKKFLPARHQTLFFSATINEEIKKLAYSLVKNPIRIQIAPKDRVSKNITHSV 222
Query: 693 IAIELEE 713
I +++
Sbjct: 223 AFIGMDD 229
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/85 (43%), Positives = 53/85 (62%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
SLIL PTRELA QIQ+ A G HL + GG + + +L+ GV ++V TPGR+
Sbjct: 75 SLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKKGVDILVATPGRLL 134
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D+ + + + +++FVLDEAD ML
Sbjct: 135 DLQGQGFVDLSRLEIFVLDEADRML 159
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF ++ L + +L+ + G+EKPS IQ++AI + GRDV+ AQ+GTGKT F+ ILQ
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 224 QIDTSI 241
++ I
Sbjct: 62 RLGGDI 67
Score = 39.5 bits (88), Expect = 0.084
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 686
GF + V K+L A Q + SATMP +V+++ +++PV++ V +E I Q
Sbjct: 162 GFLHDVRRVLKLLPAVKQTLFFSATMPPEVMDLVNGLLKNPVKVAVDPVSSPVEIIDQ 219
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKC--HACIGGTNVREDIRQLESGVHVVVGTP 420
+ +LIL+PTREL QQI+K + +++ + A GG + + L+ H+V+ TP
Sbjct: 72 IQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDRQMNNLKRTTHIVIATP 131
Query: 421 GRVYDMITRRALHANTIKLFVLDEADEMLS 510
GR+ D+I R A+ + +K +LDEADEMLS
Sbjct: 132 GRLIDLIERGAVDISHVKTVILDEADEMLS 161
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQG-RDVIAQAQSGTGKTATFSIS 214
+ TF + ++++ ++ I G KP+ IQ++AI ++ D I AQ+GTGKTA F +
Sbjct: 1 MSTFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLP 60
Query: 215 ILQQIDTS 238
+L ID +
Sbjct: 61 VLHHIDAN 68
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 513 GFKDQIHDVFKMLS-ADVQVILLSATMPDDVLEVSRCFM-RDPVRILVQKEELTLEGIKQ 686
GFK ++ + K + +D + L SATMPD++ + + +M + RI + K L I+
Sbjct: 163 GFKQDLNRILKFTTKSDRKTWLFSATMPDEIKRIVKTYMDANAPRIEINKNTLVNANIRH 222
Query: 687 FYIAIELEE 713
+ L+E
Sbjct: 223 QFAKTTLKE 231
>UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocystis
pacifica SIR-1|Rep: DEAD/DEAH box helicase -
Plesiocystis pacifica SIR-1
Length = 1390
Score = 73.3 bits (172), Expect = 6e-12
Identities = 37/85 (43%), Positives = 50/85 (58%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
++L PTRELA+Q+ ++ L GGT + + L GVH VVGTPGRV D
Sbjct: 232 IVLLPTRELAKQVCNELVRLAIETPVDVLPVYGGTAMNPQLDALARGVHAVVGTPGRVLD 291
Query: 436 MITRRALHANTIKLFVLDEADEMLS 510
I R++L + ++ VLDE DEMLS
Sbjct: 292 HIRRKSLDLSKVRTVVLDECDEMLS 316
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +2
Query: 29 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFS 208
D ET+D+M L E + + A G+ P+ +Q R T IQG DV+ Q+Q+G+GKT F
Sbjct: 152 DPAPETWDEMALPEHVRNAVDAAGWTAPTKVQARTYETMIQGTDVLVQSQTGSGKTGAFC 211
Query: 209 I 211
+
Sbjct: 212 L 212
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEEL 665
GF + I + + + Q L SAT+P D+ ++R MR+P I++ +++
Sbjct: 318 GFLEDIRAILRACPKERQTCLFSATVPRDIARIARRDMREPEHIVLSGDDI 368
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 73.3 bits (172), Expect = 6e-12
Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
LILAPTRELA Q+ + V + GG + +R L+ GVH +VGTPGRV
Sbjct: 84 LILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRPLKRGVHAIVGTPGRVM 143
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D I ++ L + +K FVLDEADEML
Sbjct: 144 DHIEKKTLKLDNLKSFVLDEADEML 168
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/70 (37%), Positives = 44/70 (62%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+ + L +L + + G+E PS IQ++ I + +D+I QAQ+GTGKTA F + +L +
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 227 IDTSIRECQV 256
I+ +I Q+
Sbjct: 74 INLNINAPQL 83
Score = 37.9 bits (84), Expect = 0.26
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF D I + + + Q+ L SATMP+ + ++++ F+ P I ++ + T I Q Y
Sbjct: 171 GFIDDIKWIMQRIPEQRQIALFSATMPNVIKKIAKQFLNQPKIIKIKTKTETATTITQKY 230
Query: 693 IAIELEEWKLETL 731
+ KLE L
Sbjct: 231 CMVGGLSNKLEAL 243
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 73.3 bits (172), Expect = 6e-12
Identities = 35/85 (41%), Positives = 51/85 (60%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L++APTRELA QIQK + + K GG V +RQ++ H++VGTPGR+
Sbjct: 434 ALVIAPTRELAVQIQKEARKFAQNTSIKPVVIYGGVQVAYHLRQVQQDCHLLVGTPGRLK 493
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + +R + +K +LDEAD ML
Sbjct: 494 DFLGKRKISLANLKYLILDEADRML 518
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/64 (31%), Positives = 36/64 (56%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+ F + N+ +L + + KP+ +Q+ AI RD+++ AQ+G+GKTA F I +
Sbjct: 352 IREFAEANIDRTILENVEKAHYIKPTPVQKYAIPIITGNRDLMSCAQTGSGKTAAFLIPV 411
Query: 218 LQQI 229
L +
Sbjct: 412 LNTL 415
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 73.3 bits (172), Expect = 6e-12
Identities = 42/86 (48%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKC-HACI-GGTNVREDIRQLESGVHVVVGTPGRV 429
L+LAPTRELAQQIQ VV G H + CI GG +R LE GV VV+ TPGR+
Sbjct: 306 LVLAPTRELAQQIQTVVRDFGTHSKPLIRYTCIFGGALKGPQVRDLERGVEVVIATPGRL 365
Query: 430 YDMITRRALHANTIKLFVLDEADEML 507
D + R + VLDEAD ML
Sbjct: 366 IDFLERGITNLRRCTYLVLDEADRML 391
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +2
Query: 41 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSI 211
+ F++ N + ++ I GF P+AIQ + + GRD++ AQ+G+GKT + +
Sbjct: 229 QDFEEGNFPDFVMNEINKMGFPNPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYML 285
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 644
GF+ QI + + + D QV++ SAT P +V ++ F+ D ++I
Sbjct: 394 GFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLHDYIQI 437
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 72.9 bits (171), Expect = 7e-12
Identities = 39/84 (46%), Positives = 50/84 (59%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L LAPTRELA+QI + A+G HL+ C GGT+ + G+ VVVGTPGR+ D
Sbjct: 178 LALAPTRELAKQISEYFEAIGPHLSTTC--IYGGTSYWPQESAIRRGLDVVVGTPGRILD 235
Query: 436 MITRRALHANTIKLFVLDEADEML 507
I + L + +K VLDE D ML
Sbjct: 236 YIRKNTLDLSKLKHVVLDEVDRML 259
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/73 (27%), Positives = 41/73 (56%)
Frame = +2
Query: 8 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGT 187
G +D + + + F + ++ + + ++A G + IQ + G DVIAQA++GT
Sbjct: 91 GEVDEETQEKIGAFSNFGIRPKTIEKLHAKGVKYLFPIQAQTFKPIDDGFDVIAQARTGT 150
Query: 188 GKTATFSISILQQ 226
GKT +F + ++++
Sbjct: 151 GKTLSFVLPLVEK 163
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 72.9 bits (171), Expect = 7e-12
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVHVVVGTPG 423
+ ++I+APTRELA QI + G + N IGG ++R+ I++L+ +VVGTPG
Sbjct: 70 VQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDS-QIVVGTPG 128
Query: 424 RVYDMITRRALHANTIKLFVLDEADEML 507
RV D + R+ L + ++ +LDEADEML
Sbjct: 129 RVNDHLNRKTLKLDDVRTIILDEADEML 156
Score = 52.8 bits (121), Expect = 8e-06
Identities = 23/70 (32%), Positives = 45/70 (64%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF ++ L +++L + F + + IQ RAI ++G+++ ++ +GTGKTA+F + IL+
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILE 61
Query: 224 QIDTSIRECQ 253
+I+ + R Q
Sbjct: 62 KIEPNKRRVQ 71
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 632
GFK++I +F+ +S DVQ+ L SAT V++++ +M +
Sbjct: 159 GFKNEIDALFERVSPDVQIGLFSATTSPKVMQIANDYMNE 198
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 72.9 bits (171), Expect = 7e-12
Identities = 37/88 (42%), Positives = 52/88 (59%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ +L+LAPTRELAQQ+ + GG++ + + L G VVVGTPGR
Sbjct: 124 VQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGLRRGARVVVGTPGR 183
Query: 427 VYDMITRRALHANTIKLFVLDEADEMLS 510
+ D+I + +L + +K VLDEADEMLS
Sbjct: 184 LLDLIRQGSLKLDQLKTLVLDEADEMLS 211
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F D NLK +L+ + GF +P+ IQ++AI + G D+I QAQ+GTGKTA F + +L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLN 115
Query: 224 QIDTSIREC 250
ID S ++C
Sbjct: 116 NIDFS-KKC 123
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 72.9 bits (171), Expect = 7e-12
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L++ PTRELA Q+ K + A+ GG I L++GV VVVGTPGR+
Sbjct: 134 ALVMCPTRELALQVSKDISTAASVRGARVLTVYGGVGYESQIDALKAGVDVVVGTPGRLL 193
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D+ R+ L + +++ VLDEADEML
Sbjct: 194 DLSQRKDLDLSHVRIVVLDEADEML 218
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/73 (35%), Positives = 42/73 (57%)
Frame = +2
Query: 11 TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTG 190
TL V +F D+ ++E++ + + G P IQ +I ++G D+I QA++GTG
Sbjct: 43 TLTETTVSVPTSFADLGVREDICQALEGVGIVSPFPIQAMSIPIAVEGTDLIGQARTGTG 102
Query: 191 KTATFSISILQQI 229
KT F I+IL +I
Sbjct: 103 KTLAFGITILLRI 115
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 72.9 bits (171), Expect = 7e-12
Identities = 42/85 (49%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALG-DHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
L+LAPTRELA Q+ A H + K A GGT+ R I L GV VVVGTPGRV
Sbjct: 143 LVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQISTLRRGVDVVVGTPGRVM 202
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + + L + + VLDEADEML
Sbjct: 203 DHMRQGTLDTSGLTSLVLDEADEML 227
Score = 59.7 bits (138), Expect = 7e-08
Identities = 27/70 (38%), Positives = 44/70 (62%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
FD E LL+ + G+ PS IQ+ A + GRD++ QAQ+GTGKTA F++ +L++
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 227 IDTSIRECQV 256
+++ + QV
Sbjct: 133 LESGQKTPQV 142
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/73 (30%), Positives = 42/73 (57%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF D + + + L + QV+L SATMP ++ +S+ ++ DP + ++ ++ + I+Q
Sbjct: 230 GFIDDVEWILEQLPKERQVVLFSATMPPEIRRLSKRYLNDPAEVTIKTKDQDGKLIRQRA 289
Query: 693 IAIELEEWKLETL 731
I + + KLE L
Sbjct: 290 ITVPMSH-KLEAL 301
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 72.9 bits (171), Expect = 7e-12
Identities = 35/84 (41%), Positives = 53/84 (63%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+L PTRELA+Q+ + IA G L+ + A GG ++ + +L GV V+V TPGR+ D
Sbjct: 78 LVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMKLRKGVDVLVATPGRLLD 137
Query: 436 MITRRALHANTIKLFVLDEADEML 507
+ + A+ + ++ VLDEAD ML
Sbjct: 138 LNRQNAVQFDQVQTLVLDEADRML 161
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/62 (38%), Positives = 42/62 (67%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F + L + LLR + ++ P+ +Q +AI + G+DV+A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 224 QI 229
++
Sbjct: 62 RL 63
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF +++ VF L A Q +L SAT DD+ ++ +R PV I V T IKQ+
Sbjct: 164 GFARELNAVFAALPAQRQTLLFSATFSDDIRAMAATILRGPVNISVSPPNATASKIKQWV 223
Query: 693 IAIE 704
+ ++
Sbjct: 224 VTVD 227
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 72.9 bits (171), Expect = 7e-12
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LILAPTREL QI + + A + + K +GG + I++ E G ++V TPGR+ D
Sbjct: 148 LILAPTRELVSQICESLRAFTEGSHLKLQVIVGGVAIGPQIKRAERGADLIVATPGRLID 207
Query: 436 MITRRALHANTIKLFVLDEADEML 507
++ R+AL + + VLDEAD+ML
Sbjct: 208 LLDRKALRLSETRFLVLDEADQML 231
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
FD + L L+ G+ A P+ IQ RAI + GRDV+ AQ+GTGKTA F + +L
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 227 I 229
+
Sbjct: 133 L 133
Score = 39.9 bits (89), Expect = 0.064
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 650
GF + + +L A+ Q +L SATMP + E+SR ++ DP R+ V
Sbjct: 234 GFIHALRKIAPLLPAERQTMLFSATMPKQMEELSRAYLTDPARVEV 279
>UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5;
Clostridium|Rep: DEAD/DEAH box helicase-like -
Clostridium cellulolyticum H10
Length = 437
Score = 72.9 bits (171), Expect = 7e-12
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHAC--IGGTNVREDIRQLESGVHVVVGTP 420
M +LIL PT ELA Q+ + + L + K + IG N+ I +L+ H++VGTP
Sbjct: 72 MQALILVPTHELAIQVVRQIELLSQNSEIKATSTPIIGDVNIMRQIDKLKLKPHIIVGTP 131
Query: 421 GRVYDMITRRALHANTIKLFVLDEADEMLSE 513
GR+ ++I +R + A+TIK ++DEAD +L +
Sbjct: 132 GRILELIQKRKISAHTIKTIIIDEADRLLDD 162
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/71 (29%), Positives = 39/71 (54%)
Frame = +2
Query: 41 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISIL 220
+ F+ M L++ L+ + P+ IQQ+AI ++ RDVI + +GTGKT + + +
Sbjct: 3 QLFESMELEKSLVEALKKESITVPTDIQQKAIPEALKNRDVILHSSTGTGKTLAYLLPLF 62
Query: 221 QQIDTSIRECQ 253
++ +E Q
Sbjct: 63 MKLSAEKKEMQ 73
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LI+ PTREL Q+ + + L ++N + GG N+ + L G+ +VV TP R+YD
Sbjct: 82 LIMVPTRELVVQVVEEIEKLAKYINLRVAGVYGGVNINTQHQDLMQGLDIVVATPRRLYD 141
Query: 436 MITRRALHANTIKLFVLDEADEML 507
++ RRA+ +I+ FV+DE D ML
Sbjct: 142 LVLRRAVQLKSIQKFVIDEVDVML 165
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F D+NL L + F+ P+ IQ++A + + GRDV+ AQ+GTGKT + + +L+
Sbjct: 10 SFQDLNLNTPLRNALEDLNFQTPTPIQEQAFSSIMSGRDVVGIAQTGTGKTFAYLLPLLR 69
Query: 224 QIDTS 238
+ S
Sbjct: 70 MLKYS 74
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 686
GFK Q++++ ++L + Q I+ SATM + V E+ + P +I V LE I Q
Sbjct: 168 GFKFQVNNIIELLPKNRQSIMFSATMTETVEEMIDTNFKAPEKISVAVSGTPLENIDQ 225
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 72.9 bits (171), Expect = 7e-12
Identities = 38/85 (44%), Positives = 53/85 (62%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+LAPTRELA+Q++K + +L+ C GG + L GV VVVGTPGR+ D
Sbjct: 184 LVLAPTRELAKQVEKEIKESAPYLSTVC--VYGGVSYTIQQSALTRGVDVVVGTPGRIID 241
Query: 436 MITRRALHANTIKLFVLDEADEMLS 510
+I R+L ++ VLDEAD+ML+
Sbjct: 242 LIEGRSLKLGEVEYLVLDEADQMLA 266
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = +2
Query: 56 MNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
++L + L + G IQ+ ++ +QGRD+IA+A++GTGKT F I I++++
Sbjct: 107 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 164
Score = 38.7 bits (86), Expect = 0.15
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI-LV-QKEELTLEGIKQ 686
GF++ + + + L Q +L SATMP V +++R ++ +P+ I LV ++E EGIK
Sbjct: 268 GFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKL 327
Query: 687 FYIA 698
+ IA
Sbjct: 328 YAIA 331
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 72.9 bits (171), Expect = 7e-12
Identities = 37/88 (42%), Positives = 55/88 (62%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ ++IL PTRELA Q+ + +L + N K GG + I+ L++ ++VVGTPGR
Sbjct: 75 IEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALKNA-NIVVGTPGR 133
Query: 427 VYDMITRRALHANTIKLFVLDEADEMLS 510
+ D I R L+ +K F+LDEADEML+
Sbjct: 134 ILDHINRGTLNLKNVKYFILDEADEMLN 161
Score = 53.6 bits (123), Expect = 5e-06
Identities = 23/63 (36%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGR-DVIAQAQSGTGKTATFSISILQ 223
F+++NL + +L I GFEKP+ IQ + I + +++AQA++G+GKTA+F+I +++
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIE 67
Query: 224 QID 232
++
Sbjct: 68 LVN 70
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 72.5 bits (170), Expect = 1e-11
Identities = 33/88 (37%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES-GVHVVVGTPG 423
+ +L+L PTRELA Q+++ + L + + GGT+V++++ L++ V +++GTPG
Sbjct: 69 VKALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNVDILIGTPG 128
Query: 424 RVYDMITRRALHANTIKLFVLDEADEML 507
R+ D+I R+AL+ + ++ VLDE D+ML
Sbjct: 129 RIKDLIDRKALNLSKVEYLVLDEFDQML 156
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/56 (37%), Positives = 38/56 (67%)
Frame = +2
Query: 62 LKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
L EL + + G+++P+ IQ+ AI ++G D++ QA +GTGKT F+I I++++
Sbjct: 7 LSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKL 62
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 72.5 bits (170), Expect = 1e-11
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
L+LAPTRELA Q+ + +L GG ++ +RQL G HV+VGTPGRV
Sbjct: 116 LVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLARGAHVIVGTPGRVM 175
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D I R++L+ +++ VLDEADEML
Sbjct: 176 DHIERKSLNLDSLTTLVLDEADEML 200
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/73 (36%), Positives = 47/73 (64%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+E+F ++L+ LL + G+E PS IQ I + G D++ +AQ+GTGKTA F++ +
Sbjct: 43 IESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPL 102
Query: 218 LQQIDTSIRECQV 256
L ++D +++ QV
Sbjct: 103 LDRLDLAVKNPQV 115
Score = 42.3 bits (95), Expect = 0.012
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF D + + + A+ Q L SATMPD + V+ ++R+P + ++ T+ +Q Y
Sbjct: 203 GFIDDVEWILQHTPAERQTALFSATMPDAIRRVAHRYLREPREVKIKASTTTVSTTRQRY 262
Query: 693 IAIELEEWKLETL 731
I + KL+ L
Sbjct: 263 CQISVAH-KLDAL 274
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 72.5 bits (170), Expect = 1e-11
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+L PTRELA Q+ + V G HL+ K GG + + L G +++ TPGR+
Sbjct: 80 ALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALRRGADILIATPGRMM 139
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D+ ++A+ + +++ VLDEAD ML
Sbjct: 140 DLYNQKAVRFDKLEVLVLDEADRML 164
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/60 (43%), Positives = 43/60 (71%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F+ + L +L+ I G+ +PSAIQ +AI ++G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 72.5 bits (170), Expect = 1e-11
Identities = 36/84 (42%), Positives = 47/84 (55%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LILAPTRELA QIQ + G C GG +++LE G +VV TPGR+ D
Sbjct: 511 LILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLND 570
Query: 436 MITRRALHANTIKLFVLDEADEML 507
++ + + + L VLDEAD ML
Sbjct: 571 ILEMKMIDFQQVSLLVLDEADRML 594
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSI 211
TF+ L E+LR + + GF P+ IQ + +Q RD++A A++G+GKT + I
Sbjct: 436 TFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLI 491
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 72.5 bits (170), Expect = 1e-11
Identities = 34/67 (50%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MTCIQGRDVIAQAQSGTGKTATFSI 211
V+TF+++ LKEELL+GIYA GF +PS IQ+ A+ M +++IAQ+QSGTGKTA F +
Sbjct: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155
Query: 212 SILQQID 232
++L +++
Sbjct: 156 AMLSRVN 162
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/76 (35%), Positives = 44/76 (57%)
Frame = +3
Query: 510 RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 689
+GF D + + L ++ Q++L SAT D V + + DP I ++KEELTL I+Q+
Sbjct: 256 QGFSDHSIRIQRALPSECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQY 315
Query: 690 YIAIELEEWKLETLCD 737
Y+ E + K + LC+
Sbjct: 316 YVLCEHRKDKYQALCN 331
Score = 44.4 bits (100), Expect = 0.003
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
L LAPT ELA Q +VV +G ++ + I G + R + +++GTPG V
Sbjct: 171 LCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIP---RGTDITKQIIIGTPGTVL 227
Query: 433 DMITR-RALHANTIKLFVLDEADEML 507
D + + + I++FVLDEAD M+
Sbjct: 228 DWCFKLKLIDLTKIRVFVLDEADVMI 253
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 72.5 bits (170), Expect = 1e-11
Identities = 32/70 (45%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQG--RDVIAQAQSGTGKTATFSI 211
V++F ++NL E+L++GI A GF+KPS IQ++A+ + R++I Q+QSGTGKTA F++
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTL 206
Query: 212 SILQQIDTSI 241
++L ++D +I
Sbjct: 207 NMLSRVDPTI 216
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++ +AP+RELA+QIQ+V+ +G I G+ R +++ +++GTPG +
Sbjct: 221 AICIAPSRELARQIQEVIDQIGQFTQVGTFLAIPGSWSRNS--RIDK--QILIGTPGTLV 276
Query: 433 DMITR--RALHANTIKLFVLDEADEMLSE 513
DM+ R R L I++ VLDEADE++++
Sbjct: 277 DMLMRGSRILDPRMIRVLVLDEADELIAQ 305
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/74 (33%), Positives = 45/74 (60%)
Frame = +3
Query: 510 RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 689
+G +Q + ++L +VQ +L SAT DDV E + F + +I ++KE++T++ I+Q
Sbjct: 306 QGLGEQTFRIKQLLPPNVQNVLFSATFNDDVQEFADRFAPEANKIFLRKEDITVDAIRQL 365
Query: 690 YIAIELEEWKLETL 731
Y+ + E+ K E L
Sbjct: 366 YLECDSEDQKYEAL 379
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 72.1 bits (169), Expect = 1e-11
Identities = 30/62 (48%), Positives = 46/62 (74%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F+D +LK++LLR + GFE+PS +Q + I I G+DV+ QA++GTGKTA F +S+L
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 224 QI 229
Q+
Sbjct: 99 QL 100
Score = 56.8 bits (131), Expect = 5e-07
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +1
Query: 250 SSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES-GVHVVVGTPGR 426
S L+L TRELA QI+ LG N K A GG DI L++ H++V TPGR
Sbjct: 108 SCLVLCHTRELAFQIKNEFKRLGKFTNFKVKAVYGGVEESVDIHTLKTKKPHILVATPGR 167
Query: 427 VYDMITRR--ALHANTIKLFVLDEADEMLS 510
+I + + I+ F++DE D +LS
Sbjct: 168 CLSLIKAKPSVIETQNIEYFIIDECDRVLS 197
>UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic
initiation factor 4AI; n=1; Pan troglodytes|Rep:
PREDICTED: similar to eukaryotic initiation factor 4AI -
Pan troglodytes
Length = 151
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/56 (60%), Positives = 44/56 (78%)
Frame = +3
Query: 537 VFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 704
+F + AD V+LLSA MP DVLEV++ FMRDP+ ILV+KEELTLEG+ FY+ +E
Sbjct: 96 MFVLDEADEMVVLLSAIMPSDVLEVTKKFMRDPIWILVRKEELTLEGVCSFYVNME 151
Score = 53.2 bits (122), Expect = 6e-06
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1
Query: 376 IRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
++Q H++VGTPG V+DM+ R L IK+FVLDEADEM+
Sbjct: 63 LKQQMEAPHIIVGTPGHVFDMLNWRYLSPKYIKMFVLDEADEMV 106
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +2
Query: 149 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ 253
+G DVIAQAQSGTGK ATF+ISILQQI+ ++ Q
Sbjct: 27 EGYDVIAQAQSGTGKMATFAISILQQIELDLKATQ 61
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/103 (36%), Positives = 55/103 (53%)
Frame = +1
Query: 199 YFLYIDSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 378
+ L + T S +L+LAPTRELA QIQK + L + CIGG ++ I
Sbjct: 237 FVLKLPKLTEETSASGPYALVLAPTRELALQIQKETLKLATPFGLRVCCCIGGEPMQPQI 296
Query: 379 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
+L +G +VV PGR+ D++ + L VLDEAD+M+
Sbjct: 297 EELSNGAEIVVAAPGRLKDLLNQSYLVLGQCYFVVLDEADKMI 339
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+DDMN+ ++LL I +E P+ IQ +I ++ RD+IA A++GTGKT + I ++Q
Sbjct: 179 WDDMNVCDDLLLLIKNI-YENPTPIQCASIPIALKMRDLIALAETGTGKTFAYLIPLIQ 236
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPGRV 429
SLIL PTREL QI + +++ K GG+++ IR L+ GVH++V TPGR+
Sbjct: 74 SLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKRGVHIIVATPGRL 133
Query: 430 YDMITRRALHANTIKLFVLDEADEMLS 510
D++ R+ + +T+ V+DEADEML+
Sbjct: 134 LDLMERKTVSLSTVHNIVMDEADEMLN 160
Score = 59.7 bits (138), Expect = 7e-08
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCI-QGRDVIAQAQSGTGKTATFSIS 214
++TF+++ + E+ + I G+E P +Q+ I + + DV+A AQ+GTGKTA F +
Sbjct: 1 MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLP 60
Query: 215 ILQQIDTSIR 244
+LQQID R
Sbjct: 61 LLQQIDVKNR 70
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/87 (41%), Positives = 51/87 (58%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ +L+LAPTRELA Q+ + L + GGT++ + + L GV ++VGTPGR
Sbjct: 73 LQALVLAPTRELANQVAQEFELLQGNAGLSIVTVYGGTDLEKQAKTLAKGVDIIVGTPGR 132
Query: 427 VYDMITRRALHANTIKLFVLDEADEML 507
V DM R + N+ K+ LDEAD ML
Sbjct: 133 VMDMNERGHIDLNSPKMLCLDEADRML 159
Score = 50.0 bits (114), Expect = 6e-05
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
FD L + L G+ G+E + +Q+ + QG DVI QA++G+GKTA F + IL++
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILER 66
Query: 227 IDTS 238
S
Sbjct: 67 CQPS 70
Score = 38.3 bits (85), Expect = 0.19
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF I + + +++ Q +L SAT P ++++ + FM +P +L EEL + I +
Sbjct: 162 GFFPDIMWIVERMTSRQQTLLFSATFPQEIIDAAHEFMNEPDFVLTNAEELDIPPIDLYS 221
Query: 693 IAI 701
+ I
Sbjct: 222 VRI 224
>UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=3;
Paramecium tetraurelia|Rep: Nucleolar RNA helicase II,
putative - Paramecium tetraurelia
Length = 664
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
L+L PTRELA Q+ + N + ++ GGT++R I Q+ G +VVGTPGR+
Sbjct: 101 LVLLPTRELAIQVTTEFNTILHKENEYRIYSIYGGTDLRNQIDQVRQGCEIVVGTPGRIQ 160
Query: 433 DMITRRALHANTIKLFVLDEADEMLS 510
D++ R+ L + I++ VLDEAD+ML+
Sbjct: 161 DLLERKVLKLDEIQVVVLDEADQMLN 186
Score = 36.7 bits (81), Expect = 0.59
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = +2
Query: 38 VETFDDMNLK-----EELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTAT 202
V+ D+ NLK ++ + + G IQQ+ T G D+I Q ++G+GKT
Sbjct: 19 VKGIDESNLKAYIKNKQTRKVLEGRGISNLFPIQQQCFETIYNGDDIIGQDRTGSGKTLA 78
Query: 203 FSISILQQI 229
+ + IL++I
Sbjct: 79 YCLPILERI 87
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 72.1 bits (169), Expect = 1e-11
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
SLILAPTREL+ QI++ +I+LG + +GG ++ QL H++VG+PGR+
Sbjct: 112 SLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDMVSQALQLSKKPHIIVGSPGRIA 171
Query: 433 DMI-TRRALHANTIKLFVLDEADEMLS 510
D + + TIK VLDEAD++LS
Sbjct: 172 DHLQNTKGFSLETIKYLVLDEADKLLS 198
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = +2
Query: 17 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKT 196
D D D TF+D+ + EL R G+++P+ IQ AI + G+D+I A++G+GKT
Sbjct: 33 DDDKDDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKT 92
Query: 197 ATFSISILQQI 229
A F+I ILQ++
Sbjct: 93 AAFTIPILQKL 103
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVHVVVGTPG 423
+ ++IL PTRELA Q+ + + L +L GG + I+ L+ GV +++GTPG
Sbjct: 73 LQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGVQIIIGTPG 132
Query: 424 RVYDMITRRALHANTIKLFVLDEADEML 507
RV D I R L N IK +LDEADEML
Sbjct: 133 RVMDHIDRGTLSLNNIKTVILDEADEML 160
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F D+N+ E+ + + GFE+ S IQ AI + +DV QAQ+GTGKTA F I +L+
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLEN 65
Query: 227 IDTSIRECQ 253
ID+ Q
Sbjct: 66 IDSEDNNLQ 74
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/73 (31%), Positives = 45/73 (61%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF++ I + + + + Q +L SAT+P ++L++++ + +P + V K ELT ++Q Y
Sbjct: 163 GFREDIEYILEDIPYERQFLLFSATLPQEILQLAQRYQTNPEIVKVTKHELTTPDVEQKY 222
Query: 693 IAIELEEWKLETL 731
++ E+ KLE L
Sbjct: 223 FEVK-EDMKLELL 234
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/85 (42%), Positives = 49/85 (57%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+++LAPTRELAQQIQ + L +C + +GG E Q+ G H+VV TPGR+
Sbjct: 328 AVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLL 387
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + RR + V+DEAD ML
Sbjct: 388 DCLERRLFVLSQCTYVVMDEADRML 412
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/66 (31%), Positives = 41/66 (62%)
Frame = +2
Query: 23 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTAT 202
D + +++ L E+L+ + +++PS+IQ+ AI +Q +D+I A++G+GKTA
Sbjct: 243 DLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTAA 302
Query: 203 FSISIL 220
F I ++
Sbjct: 303 FIIPLI 308
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 71.7 bits (168), Expect = 2e-11
Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Frame = +1
Query: 235 KHS*MSSLILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVV 411
K S + +ILAPTRE+A QI++V+ +LG + K + IGG + D ++L S H+ +
Sbjct: 89 KISSVQVIILAPTREIAIQIKEVIASLGCEIKGLKVESFIGGVAMDIDRKKL-SNCHIAI 147
Query: 412 GTPGRVYDMITRRALHANTIKLFVLDEADEMLSE 513
G PGRV +I + L + ++LFVLDEAD+++ E
Sbjct: 148 GAPGRVKHLIDKGYLKMDHVRLFVLDEADKLMEE 181
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/71 (46%), Positives = 43/71 (60%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF M L +++L G+ GF KPS IQ ++I G D+I +A+SGTGKTA F I L+
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTGKTAVFGIIALE 84
Query: 224 QIDTSIRECQV 256
ID I QV
Sbjct: 85 MIDIKISSVQV 95
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+L+PTREL+ QI A G H+ IGG + +R L GV V+V TPGR+ D
Sbjct: 93 LVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGRQVRSLMQGVEVLVATPGRLLD 152
Query: 436 MITRRALHANTIKLFVLDEADEML 507
++ L +++ VLDEAD ML
Sbjct: 153 LVQSNGLKLGSVEFLVLDEADRML 176
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/71 (36%), Positives = 43/71 (60%)
Frame = +2
Query: 17 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKT 196
D + ++ +F D L E + R + + P+ IQ + I T + GRDV+ AQ+GTGKT
Sbjct: 8 DMERTHLLTSFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKT 67
Query: 197 ATFSISILQQI 229
A+F++ IL ++
Sbjct: 68 ASFALPILHRL 78
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF + I + L Q + SATMP D+ E++ +RDP R+ V T E I Q
Sbjct: 179 GFINDIRKIVAKLPIKRQTLFFSATMPKDIAELADSMLRDPARVAVTPVSSTAERINQRI 238
Query: 693 IAIE 704
+ ++
Sbjct: 239 LQVD 242
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 71.7 bits (168), Expect = 2e-11
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Frame = +1
Query: 172 SPVRNWKN-CYFLYIDSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDH--LNAKCH 342
SP + K Y L I + K M ++ILAPT ELA QI K + L + ++
Sbjct: 47 SPTGSGKTLAYLLPIFQKIDTSKRE-MQAIILAPTHELAMQINKEIQLLSGNSKVSVTST 105
Query: 343 ACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
IG NV+ I +L+ HV+VG+ GR+ ++I ++ + A+TIK V+DE D++L
Sbjct: 106 PIIGNANVKRQIEKLKEKPHVIVGSSGRILELIKKKKISAHTIKTIVVDEGDKLL 160
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/73 (39%), Positives = 47/73 (64%)
Frame = +2
Query: 35 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSIS 214
++E+FD + L + L+ G+ G KP+ IQ + I ++ +DVI Q+ +G+GKT + +
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLP 60
Query: 215 ILQQIDTSIRECQ 253
I Q+IDTS RE Q
Sbjct: 61 IFQKIDTSKREMQ 73
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 71.7 bits (168), Expect = 2e-11
Identities = 32/85 (37%), Positives = 55/85 (64%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++ILAP+REL QI +V+ + + IGG NV++ + +L+ H++VGTPGRV+
Sbjct: 75 AVILAPSRELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVF 134
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
++I + L + +K VLDE D+++
Sbjct: 135 ELIKAKKLKMHEVKTIVLDETDQLV 159
Score = 50.4 bits (115), Expect = 5e-05
Identities = 19/46 (41%), Positives = 35/46 (76%)
Frame = +2
Query: 92 AYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
A GF+KP+ +Q++A + G+DVIA++ +GTGKT +++ +L++I
Sbjct: 21 ASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERI 66
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/85 (40%), Positives = 50/85 (58%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L++ PTRELA Q+ K + NA+ GG + L+ GV +VVGTPGR+
Sbjct: 118 ALVIVPTRELAVQVAKDLENAARKRNARIATIYGGRAYEPQVDSLQKGVEIVVGTPGRLI 177
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D+ ++ L +K+ +LDEADEML
Sbjct: 178 DLYKQKHLSLKNVKIVILDEADEML 202
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +2
Query: 41 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISIL 220
++F D N++ +++ + G P IQ + + G D+I QA++GTGKT F I L
Sbjct: 37 KSFADYNVRADIVESLADAGITHPFPIQAMTLPVALAGHDIIGQAKTGTGKTLGFGIPAL 96
Query: 221 QQI 229
Q++
Sbjct: 97 QRV 99
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 71.7 bits (168), Expect = 2e-11
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPGRV 429
+L+LAPTRELAQQI+K V A L + K +GGTN+ + +L +GV + V TPGR
Sbjct: 194 ALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIEKQRSELRAGVEIAVATPGRF 253
Query: 430 YDMITRRALHANTIKLFVLDEADEML 507
D + + + I VLDEAD ML
Sbjct: 254 IDHLQQGNTSLSRISYVVLDEADRML 279
Score = 56.8 bits (131), Expect = 5e-07
Identities = 24/62 (38%), Positives = 44/62 (70%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+E+F+DM L +++ I + + +PS+IQ +A+ + GRD++ A++G+GKTA F+I +
Sbjct: 117 IESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPM 176
Query: 218 LQ 223
LQ
Sbjct: 177 LQ 178
Score = 41.9 bits (94), Expect = 0.016
Identities = 21/75 (28%), Positives = 41/75 (54%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF+ QI ++ + L Q +L SATMP ++ +++ ++ +PV++ V K + Q
Sbjct: 282 GFEPQIREIMRSLPEKHQTLLFSATMPVEIEALAKEYLANPVQVKVGKVSSPTTNVSQTL 341
Query: 693 IAIELEEWKLETLCD 737
+ + E K++ L D
Sbjct: 342 VKVSGSE-KIDRLLD 355
>UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 654
Score = 71.7 bits (168), Expect = 2e-11
Identities = 38/85 (44%), Positives = 51/85 (60%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
++LAPTRELA+Q+ +G+ K GGT RE L G VV+GTPGR+ D
Sbjct: 166 VVLAPTRELAKQVFADFDWIGNSFGFKSVCVYGGTPYREQEMGLRGGCDVVIGTPGRMKD 225
Query: 436 MITRRALHANTIKLFVLDEADEMLS 510
+ R+ L + +K VLDEADEML+
Sbjct: 226 HLERKTLMMDKLKFRVLDEADEMLN 250
Score = 40.3 bits (90), Expect = 0.048
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +2
Query: 50 DDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
D+ L E + + GF+ AIQ + + G+DV+ +A++G GKT F + I++++
Sbjct: 86 DNFALSEPVKATLRKKGFDALFAIQAETLEIALSGKDVVGRARTGCGKTLAFVLPIVEEM 145
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++I+APTRELAQQI++ G L K + IGG + + +L GV VV+ TPGR+
Sbjct: 381 AIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLL 440
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D++ R L N +LDEAD ML
Sbjct: 441 DVLENRYLLLNQCTYVILDEADRML 465
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/61 (32%), Positives = 39/61 (63%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+ +++ +E+ + + G+ +P+ IQ++AI +Q RDVI A++G+GKTA F + +
Sbjct: 300 LRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPL 359
Query: 218 L 220
L
Sbjct: 360 L 360
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 71.7 bits (168), Expect = 2e-11
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+L+PTRELA QI V+ G+ K GG++ I + SGV +V+GTPGR+ D
Sbjct: 195 LVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRD 254
Query: 436 MITRRALHANTIKLFVLDEADEML 507
+I L + + VLDEAD ML
Sbjct: 255 LIESNVLRLSDVSFVVLDEADRML 278
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
++TF + NL E +L FEKPS IQ + GRD+I A++G+GKT F I
Sbjct: 115 LKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPA 172
Query: 218 LQQI 229
+ +
Sbjct: 173 IMHV 176
>UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and RNA
helicases; n=1; Bifidobacterium longum DJO10A|Rep:
COG0513: Superfamily II DNA and RNA helicases -
Bifidobacterium longum DJO10A
Length = 670
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+LAPTRELA QI V++ L GG IR L++G +VV PGR+ D
Sbjct: 113 LVLAPTRELANQINDVLMPLAHTFGMNTTTVYGGVKYIHQIRDLKAGADIVVACPGRLED 172
Query: 436 MITRRALHANTIKLFVLDEADEM 504
++ ++AL +++++ V+DEADEM
Sbjct: 173 LLRQQALTLSSVEVVVIDEADEM 195
Score = 36.7 bits (81), Expect = 0.59
Identities = 17/62 (27%), Positives = 35/62 (56%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF ++ + L+R + A + IQ + + GRD++ + ++G+GKT FSI ++
Sbjct: 11 TFGELGVPGPLVRVLAADDKKTAFPIQADTLPDSLAGRDILGRGRTGSGKTLAFSIPLVT 70
Query: 224 QI 229
++
Sbjct: 71 RL 72
>UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=3;
Bifidobacterium|Rep: Possible ATP-dependent RNA helicase
- Bifidobacterium longum
Length = 728
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+LAPTRELA QI V++ L GG IR L++G +VV PGR+ D
Sbjct: 129 LVLAPTRELANQINDVLMPLAHTFGMNTTTVYGGVKYIHQIRDLKAGADIVVACPGRLED 188
Query: 436 MITRRALHANTIKLFVLDEADEM 504
++ ++AL +++++ V+DEADEM
Sbjct: 189 LLRQQALTLSSVEVVVIDEADEM 211
Score = 36.7 bits (81), Expect = 0.59
Identities = 17/62 (27%), Positives = 35/62 (56%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF ++ + L+R + A + IQ + + GRD++ + ++G+GKT FSI ++
Sbjct: 27 TFGELGVPGPLVRVLAADDKKTAFPIQADTLPDSLAGRDILGRGRTGSGKTLAFSIPLVT 86
Query: 224 QI 229
++
Sbjct: 87 RL 88
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
L+LAPTRELAQQ+ + G + + + GG RE + L G V+VGTPGRV
Sbjct: 81 LVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGLRRGAQVIVGTPGRVI 140
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + R +L + + VLDEADEML
Sbjct: 141 DHLDRGSLKLDGLNALVLDEADEML 165
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/71 (43%), Positives = 47/71 (66%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF +++L +L + G+E PS IQ + I ++GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 10 TFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLLS 69
Query: 224 QIDTSIRECQV 256
++D RE QV
Sbjct: 70 RLDLQRREPQV 80
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/64 (34%), Positives = 36/64 (56%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF D + V D Q + SAT+PD++ + ++ DP+RI ++ + T EGI+Q
Sbjct: 168 GFIDDVKRVVSDTPKDAQRVFFSATLPDEISRIVNHYLVDPLRIAIETKTKTAEGIEQRL 227
Query: 693 IAIE 704
+ IE
Sbjct: 228 VRIE 231
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+LAPTRELA QI + A G +L + GG R+LE G+ ++V TPGR+
Sbjct: 78 ALVLAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKLEKGIDILVATPGRLL 137
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D+I + + + ++ FVLDE D+ML
Sbjct: 138 DLINQGFIDLSHVEHFVLDETDQML 162
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/60 (35%), Positives = 38/60 (63%)
Frame = +2
Query: 50 DDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
+++ + + + + A G+ + + IQ AI ++G D++ AQ+GTGKTA F+I ILQ +
Sbjct: 4 NELKIINPIQKALAAQGYSEATPIQAEAIPHLLEGLDLLGCAQTGTGKTAAFAIPILQSL 63
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/87 (37%), Positives = 52/87 (59%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ +L+L PTRELA Q+ + + +L + + A GG ++ +R L ++VGTPGR
Sbjct: 72 LQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNPEIIVGTPGR 131
Query: 427 VYDMITRRALHANTIKLFVLDEADEML 507
+ D + R + + +K VLDEADEML
Sbjct: 132 LMDHMNRGTISLSPLKYVVLDEADEML 158
Score = 63.3 bits (147), Expect = 6e-09
Identities = 31/63 (49%), Positives = 43/63 (68%)
Frame = +2
Query: 41 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISIL 220
E F M LK +LL+ I GFEKP+ IQ ++I + G D++ QAQ+GTGKTA+F I IL
Sbjct: 4 ENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPIL 63
Query: 221 QQI 229
++
Sbjct: 64 NRV 66
Score = 54.4 bits (125), Expect = 3e-06
Identities = 27/74 (36%), Positives = 40/74 (54%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF I + + Q L SAT+PD+V E+ FM+ P IL++ E T+ I+Q+Y
Sbjct: 161 GFLPDIQKILSQCPRERQTFLFSATLPDEVRELGTKFMKQPEIILIESPERTVPEIEQYY 220
Query: 693 IAIELEEWKLETLC 734
+ K+ETLC
Sbjct: 221 YQVNSRR-KIETLC 233
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/83 (40%), Positives = 49/83 (59%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+L PTRELA Q+ + LGD L+ + +GG I L+ G+ V++ TPGR+ D
Sbjct: 223 LVLVPTRELAMQVADALRPLGDSLDLRLSVVVGGVPYGRQIAALQRGIDVLIATPGRLVD 282
Query: 436 MITRRALHANTIKLFVLDEADEM 504
+I R A+ + + VLDEAD M
Sbjct: 283 LIDRDAVSLAEVDVAVLDEADHM 305
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/62 (37%), Positives = 38/62 (61%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF ++ L EEL+ + G P AIQ R + I GRD++ +A++G+GKT F + +L
Sbjct: 147 TFAELGLPEELVAALERRGMTAPFAIQSRTLPDGIAGRDILGRARTGSGKTLGFGLPMLA 206
Query: 224 QI 229
++
Sbjct: 207 RL 208
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L++ PTRELAQQI +V + D +GG + + L+ G ++V TPGR+ D
Sbjct: 142 LVITPTRELAQQIDEVAGKIADVTGHVAVTVVGGVSYKPQTAALKYGCDILVATPGRLVD 201
Query: 436 MITRRALHANTIKLFVLDEADEML 507
+I + A H + +K+ VLDEAD ML
Sbjct: 202 LIEQGACHLDEVKVLVLDEADRML 225
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/62 (38%), Positives = 41/62 (66%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
FD++ L +E+LR I G+ P+ +Q +I ++GRD++A AQ+GTGKTA F + +
Sbjct: 48 FDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQTGTGKTAAFLLPTMNN 107
Query: 227 ID 232
++
Sbjct: 108 LE 109
Score = 33.1 bits (72), Expect = 7.3
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF + + + A+ Q +L SAT+ ++ + + DP R+ + T + + QF
Sbjct: 228 GFLPAVRRIVRETPAERQTLLFSATLDEEAVGEITDLVSDPARVEIAPATSTADTVDQFV 287
Query: 693 IAIELE 710
+ +E
Sbjct: 288 FPVSIE 293
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+LAPTRELA QI + + GG N E +R+L+ G H++V TPGR+ D
Sbjct: 354 LVLAPTRELATQIYEEAKKFSYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLDD 413
Query: 436 MITRRALHANTIKLFVLDEADEML 507
+I R + ++ VLDEAD ML
Sbjct: 414 IINRGKIGLENLRFLVLDEADRML 437
Score = 53.6 bits (123), Expect = 5e-06
Identities = 24/64 (37%), Positives = 42/64 (65%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+ +FDD+ L E + I ++KP+ +Q+ AI + GRD+++ AQ+G+GKTA F + I
Sbjct: 266 ITSFDDIKLTEIIRTNIKMARYDKPTPVQKYAIPIILSGRDLMSCAQTGSGKTAAFLVPI 325
Query: 218 LQQI 229
L ++
Sbjct: 326 LNRM 329
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALG-DHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
L++ PTRELA Q+ + + + N K A GGT+ R I L+ V VVVGTPGR+
Sbjct: 124 LVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYALKRKVDVVVGTPGRIM 183
Query: 433 DMITRRALHANTIKLFVLDEADEMLS 510
D I + N+I VLDEADEML+
Sbjct: 184 DHIRQGTFKVNSINCLVLDEADEMLN 209
Score = 54.0 bits (124), Expect = 4e-06
Identities = 22/61 (36%), Positives = 40/61 (65%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F D + +L + G++ P+ IQ+ AI + GRD++ QAQ+GTGKTA F++ ++++
Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112
Query: 227 I 229
+
Sbjct: 113 L 113
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/73 (27%), Positives = 42/73 (57%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF + I + L + Q++L SATMP+++ +++ ++ DP IL++ + + I Q +
Sbjct: 211 GFLEDIEWIIDQLPKNKQMVLFSATMPNEIRNIAKKYLNDPAEILIKSVKKETQLISQKF 270
Query: 693 IAIELEEWKLETL 731
+ ++ KL+ L
Sbjct: 271 LYVQ-RHHKLDAL 282
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/85 (43%), Positives = 48/85 (56%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+L PTRELA Q+ + + G L A+ GG + +R L GV VVV TPGR
Sbjct: 131 ALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGRQVRALVQGVDVVVATPGRAL 190
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + R L + + VLDEADEML
Sbjct: 191 DHMGRGTLRLDGLHTVVLDEADEML 215
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/71 (40%), Positives = 48/71 (67%)
Frame = +2
Query: 17 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKT 196
D D + V F ++ L+ ELLR + A G+E+P+ IQ+ A+ + GRD++ QA +GTGKT
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKT 108
Query: 197 ATFSISILQQI 229
A F++ +L ++
Sbjct: 109 AAFALPLLHRL 119
Score = 36.3 bits (80), Expect = 0.78
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 650
GF + I + + Q +L SAT+P + +++R +RDPVRI +
Sbjct: 218 GFAEDIDAILEQAPQKRQTVLFSATLPPRMDQIARRHLRDPVRIQI 263
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 70.9 bits (166), Expect = 3e-11
Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGVHVVVGTPGRVY 432
L+LAPTRELA Q+ + A ++ ACI GG IR L+ GV VVVGT GRV
Sbjct: 81 LVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQGVKVVVGTTGRVM 140
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D I + L + ++ VLDEADEML
Sbjct: 141 DHIEKGTLQLDNLRALVLDEADEML 165
Score = 62.9 bits (146), Expect = 8e-09
Identities = 26/67 (38%), Positives = 44/67 (65%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F + L ++++ + G+E P+ IQQ AI + GRDV+ QAQ+GTGKTA F++ ++
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 227 IDTSIRE 247
+D + R+
Sbjct: 69 MDLASRD 75
Score = 42.7 bits (96), Expect = 0.009
Identities = 20/64 (31%), Positives = 37/64 (57%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF D + V +S + Q +L SAT+P D+ ++ ++R+P +I V+ + T + Q +
Sbjct: 168 GFIDDVKFVLSHVSDECQRLLFSATIPTDIADIIEEYLRNPCKIQVKAKTKTANTVTQKF 227
Query: 693 IAIE 704
I I+
Sbjct: 228 IVIK 231
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 70.9 bits (166), Expect = 3e-11
Identities = 38/99 (38%), Positives = 57/99 (57%)
Frame = +1
Query: 211 IDSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 390
ID N++ + ++I+ PTRELA QI + + +L K GG ++ + + LE
Sbjct: 81 IDFKANKF----VKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDLE 136
Query: 391 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
GV +VVGTPGR+ D + R L + ++ VLDEAD ML
Sbjct: 137 KGVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRML 175
Score = 63.7 bits (148), Expect = 5e-09
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 41 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQ-GRDVIAQAQSGTGKTATFSISI 217
E F+D L EE+L I G+EKP+ IQ+ + + +D+IAQAQ+GTGKTA F I +
Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPL 77
Query: 218 LQQID 232
L++ID
Sbjct: 78 LERID 82
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/74 (33%), Positives = 45/74 (60%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF D + ++ K + + L SATMP ++++++R FM++ + + K+ELT E +Q Y
Sbjct: 178 GFLDDVLEIIKRTGENKRTFLFSATMPKEIVDIARKFMKEYIHVSTVKDELTTENAEQLY 237
Query: 693 IAIELEEWKLETLC 734
++ E+ KL LC
Sbjct: 238 FEVD-EKDKLPLLC 250
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/76 (43%), Positives = 54/76 (71%)
Frame = +3
Query: 510 RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 689
+ FK I ++++ L++ VQ+I+ SAT+P L+ + F+ DPV IL++KEE+ ++ IKQF
Sbjct: 167 KNFKIDIFNIYRYLNSKVQIIICSATIPLYTLQAASKFLLDPVMILMRKEEINIDKIKQF 226
Query: 690 YIAIELEEWKLETLCD 737
YI++ +EE KL L D
Sbjct: 227 YISVFIEENKLLALLD 242
Score = 70.5 bits (165), Expect = 4e-11
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Frame = +1
Query: 208 YIDSTTNRYKHS*MSS--LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 381
YI T+N+ S S LIL PTREL+ QI+ V L + +C GG + ED++
Sbjct: 64 YIIGTSNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIYTKNSITSCHGGRWLGEDLK 123
Query: 382 QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSE 513
L+ H +VGTPGRV ++ +L I+ FVLDEAD ++++
Sbjct: 124 NLKKNFHGIVGTPGRVLHLLQIGSLAITKIRTFVLDEADILMNK 167
Score = 50.4 bits (115), Expect = 5e-05
Identities = 25/72 (34%), Positives = 40/72 (55%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
V++F D+ LK + +G++ S IQ ++ ++GRD+I Q+ SGTGKT + I
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKGRDIIYQSPSGTGKTTCYIIGT 68
Query: 218 LQQIDTSIRECQ 253
Q+ SI Q
Sbjct: 69 SNQLCQSINSPQ 80
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/90 (40%), Positives = 50/90 (55%)
Frame = +1
Query: 238 HS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGT 417
HS +LILAPTREL+ QI H +C GG + R + +L G ++V T
Sbjct: 234 HSSPQALILAPTRELSLQIYGEARKFTYHTPVRCVVVYGGADPRHQVHELSRGCKLLVAT 293
Query: 418 PGRVYDMITRRALHANTIKLFVLDEADEML 507
PGR+ DM +R + + I+ +LDEAD ML
Sbjct: 294 PGRLMDMFSRGYVRFSEIRFLILDEADRML 323
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/64 (37%), Positives = 40/64 (62%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
V +F +MN+ LL + G+ KP+ +Q I T + RD++A AQ+G+GKTA++ I
Sbjct: 156 VLSFSEMNMVPVLLENVKRCGYTKPTPVQSLGIPTALNHRDLMACAQTGSGKTASYLIPA 215
Query: 218 LQQI 229
+ +I
Sbjct: 216 INEI 219
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 70.9 bits (166), Expect = 3e-11
Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LIL PTRELA QI + ALG + KC +GG ++ R+L HVVV TPGR+
Sbjct: 160 ALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLA 219
Query: 433 DMITRR----ALHANTIKLFVLDEADEML 507
D+I A I+ FVLDEAD ML
Sbjct: 220 DLIESDPDTIAKVFKKIQFFVLDEADRML 248
Score = 37.1 bits (82), Expect = 0.45
Identities = 16/67 (23%), Positives = 35/67 (52%)
Frame = +2
Query: 29 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFS 208
+ + F + + + + + + + +Q I ++G D++ A++GTGKT F+
Sbjct: 85 NMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFA 144
Query: 209 ISILQQI 229
I ILQ++
Sbjct: 145 IPILQKL 151
>UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Rep:
DEAD-box helicase 5 - Plasmodium falciparum
Length = 755
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/103 (35%), Positives = 54/103 (52%)
Frame = +1
Query: 202 FLYIDSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 381
F Y NR + S L+L PTREL++Q++ + N + GG +
Sbjct: 243 FSYGKKYQNREHNKDPSILVLEPTRELSKQVENTFKEISQFYNFNIMSIYGGESYTYQEN 302
Query: 382 QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 510
+L G+ ++ GTPGR+ D I ++ L IK VLDEADEML+
Sbjct: 303 KLRKGIDILTGTPGRIIDHIEKKNLSLQNIKYVVLDEADEMLN 345
Score = 34.7 bits (76), Expect = 2.4
Identities = 11/44 (25%), Positives = 30/44 (68%)
Frame = +2
Query: 98 GFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
G + + IQ ++ +G+D+I ++++G+GKT F++ +++++
Sbjct: 162 GIKYMTKIQSQSFKPIYEGKDIIGRSETGSGKTLAFALPLVEKL 205
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/87 (37%), Positives = 55/87 (63%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ +IL P RELA QI + V + + +GGT++++DI ++ +GVHV+VGTPGR
Sbjct: 177 IQGIILVPIRELALQISRNVKRMSEGTGVISAPVVGGTSMQDDIIRVSNGVHVMVGTPGR 236
Query: 427 VYDMITRRALHANTIKLFVLDEADEML 507
+ D++ +R + + V DEAD++L
Sbjct: 237 IVDLVEKRVGTLSKRVILVFDEADKLL 263
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/64 (29%), Positives = 42/64 (65%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
++ + L LL+ I G++ PS +Q +I + G++++ ++++GTGKTA++ + +L
Sbjct: 110 WESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGKTASYIVPMLNM 169
Query: 227 IDTS 238
I++S
Sbjct: 170 INSS 173
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/85 (43%), Positives = 49/85 (57%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
SL+LAPTRELA QI + + GG ++ + IR LE G H++V TPGR+
Sbjct: 269 SLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLV 328
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
DM+ R + + K VLDEAD ML
Sbjct: 329 DMMERGKIGLDFCKYLVLDEADRML 353
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/64 (37%), Positives = 41/64 (64%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+E+F D+ + E ++ I + +P+ +Q+ AI + RD++A AQ+G+GKTA F + I
Sbjct: 179 IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPI 238
Query: 218 LQQI 229
L QI
Sbjct: 239 LSQI 242
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/66 (50%), Positives = 51/66 (77%), Gaps = 2/66 (3%)
Frame = +2
Query: 41 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQG--RDVIAQAQSGTGKTATFSIS 214
++FD++ L ELL+GIYA F+KPS IQ+RA+ + R++IAQ+QSGTGKTA FS++
Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLT 151
Query: 215 ILQQID 232
+L +++
Sbjct: 152 MLTRVN 157
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++ LAP+RELA+Q +VV +G + + E +Q+ + V+VGTPG V
Sbjct: 165 AICLAPSRELARQTLEVVQEMGKFTKITSQLIVPDSF--EKNKQINA--QVIVGTPGTVL 220
Query: 433 DMITRRALHANTIKLFVLDEADEMLSE 513
D++ R+ + IK+FVLDEAD ML +
Sbjct: 221 DLMRRKLMQLQKIKIFVLDEADNMLDQ 247
Score = 40.3 bits (90), Expect = 0.048
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +3
Query: 510 RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 689
+G DQ V + L D Q++L SAT D V + ++ + + + +Q E+ ++ IKQ
Sbjct: 248 QGLGDQCIRVKRFLPKDTQLVLFSATFADAVRQYAKKIVPNANTLELQTNEVNVDAIKQL 307
Query: 690 YIAIELEEWKLETLCD 737
Y+ + E K + L +
Sbjct: 308 YMDCKNEADKFDVLTE 323
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/85 (41%), Positives = 49/85 (57%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LILAPTRELAQQ+ + H GGT++R QL GV +++ TPGR+
Sbjct: 80 ALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQEQLAKGVDILIATPGRLL 139
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + + N +++ VLDEAD ML
Sbjct: 140 DHLFTKKTSLNQLQMLVLDEADRML 164
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = +2
Query: 35 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSIS 214
+ TF ++ L L + GF P+ IQQ+AI +QGRDV+A AQ+GTGKTA + +
Sbjct: 1 MTNTFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLP 60
Query: 215 ILQQIDTSIRE 247
++Q + RE
Sbjct: 61 LIQMLSRQSRE 71
Score = 33.9 bits (74), Expect = 4.2
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF I + K + + Q +L SAT V ++ M++PV + V T + +KQ
Sbjct: 167 GFLPDIQRIMKRMPEERQTLLFSATFETRVKALAYRLMKEPVEVQVAAANSTADTVKQMV 226
Query: 693 IAIE 704
++
Sbjct: 227 YPVD 230
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/85 (38%), Positives = 52/85 (61%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+LAPTRELA Q+ + G L + + GG V I++L+ G ++V TPGR+
Sbjct: 79 ALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLKRGTDILVATPGRLL 138
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D++ ++A+ ++ VLDEAD ML
Sbjct: 139 DLLRQKAISLEKLEYLVLDEADRML 163
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/62 (38%), Positives = 45/62 (72%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F ++ L EL + G+E+P+ IQ +AI ++G D++A+AQ+GTGKTA+F++ I++
Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64
Query: 224 QI 229
++
Sbjct: 65 KL 66
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 70.5 bits (165), Expect = 4e-11
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQI-QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRV 429
+++L PTRELA+Q+ Q+ A D N K GG + I+ L+ H++VGTPGRV
Sbjct: 75 AIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKHSPHIIVGTPGRV 134
Query: 430 YDMITRRALHANTIKLFVLDEADEML 507
D + +R + +KL VLDEAD ML
Sbjct: 135 MDHVEKRRIDLRNVKLRVLDEADRML 160
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/67 (34%), Positives = 42/67 (62%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
VET +++ + + + + G + S IQ +++ +QG+DVI QAQ+G+GKT F I
Sbjct: 3 VETVKQLDINPAITKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPA 62
Query: 218 LQQIDTS 238
L++I+ +
Sbjct: 63 LEKIEVN 69
Score = 36.7 bits (81), Expect = 0.59
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEE 662
GF+D + +F VQ +L SAT + + V++ ++ +PV V+ +E
Sbjct: 163 GFEDDLRIIFGQTPKQVQTLLFSATFTEQIERVAKQYLHNPVTCKVESQE 212
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 70.5 bits (165), Expect = 4e-11
Identities = 36/84 (42%), Positives = 47/84 (55%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LIL P RELA Q+ + + +L K A G N+ + + L GV +V GTPGRV+D
Sbjct: 75 LILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQHNINLETQILNKGVSIVTGTPGRVFD 134
Query: 436 MITRRALHANTIKLFVLDEADEML 507
I+ L I+ VLDEAD ML
Sbjct: 135 HISHGTLSTKNIRFLVLDEADRML 158
Score = 53.6 bits (123), Expect = 5e-06
Identities = 22/60 (36%), Positives = 39/60 (65%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF+++ + +L+ I GF+ P+ +Q +AI + D+I +++G+GKTA F +SILQ
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF DQ+ + K L + +L SATMP ++ + + +M +PV I ++ + T++ I Q Y
Sbjct: 161 GFLDQVVRIVKTLPKERITLLFSATMPPEIHNICKRYMNNPVTIEIESQTKTVDTIHQVY 220
Query: 693 IAIELEE 713
+ E
Sbjct: 221 YRVNYNE 227
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 70.5 bits (165), Expect = 4e-11
Identities = 31/85 (36%), Positives = 49/85 (57%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L++APTREL QQI+K H + + +GG ++ + Q+ G +++ TPGR+
Sbjct: 492 ALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQAYQVSKGCEIIIATPGRLN 551
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + +R L N VLDEAD M+
Sbjct: 552 DCLEKRYLVLNQCNYIVLDEADMMI 576
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+ T+ + NL E+L I G+EKPS IQ ++I + GRD++ A++G+GKT F I +
Sbjct: 412 IRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPM 471
Query: 218 LQQIDTSIR 244
L I R
Sbjct: 472 LIYISKQPR 480
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/86 (40%), Positives = 49/86 (56%)
Frame = +1
Query: 250 SSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRV 429
+++I+ PTREL QI + GGT+V R+LE G HVVVGTPGR+
Sbjct: 351 AAIIVGPTRELVNQIYLEARKFASSTCVRPVVVYGGTSVGYQARELEKGAHVVVGTPGRL 410
Query: 430 YDMITRRALHANTIKLFVLDEADEML 507
D I + ++ + +K +LDEAD ML
Sbjct: 411 LDFIGKGKINLSKVKYLILDEADRML 436
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
FD +L E + + +++P+ IQ+ AI + G+D++ AQ+G+GKTA F + +L
Sbjct: 272 FDQADLSETVRSNVRKAKYDRPTPIQKWAIPIVLSGKDLMGCAQTGSGKTAAFLLPVLTG 331
Query: 227 I 229
I
Sbjct: 332 I 332
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/84 (39%), Positives = 48/84 (57%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+L+PTRELA QIQ + G C GG ++++E GV +VV TPGR+ D
Sbjct: 237 LVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLND 296
Query: 436 MITRRALHANTIKLFVLDEADEML 507
++ + + + + VLDEAD ML
Sbjct: 297 ILEMKRISLHQVSYLVLDEADRML 320
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/56 (41%), Positives = 36/56 (64%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSI 211
+F+ L ELLR +Y+ GF PS IQ ++ +Q RD++A A++G+GKT + I
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLI 217
>UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 41 - Arabidopsis thaliana (Mouse-ear cress)
Length = 505
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/85 (37%), Positives = 52/85 (61%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+++LAPTREL Q++ LG L K +GG + + +++ GV +++GTPGRV
Sbjct: 189 AMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVV 248
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D++++ + + I FVLDE D ML
Sbjct: 249 DLLSKHTIELDNIMTFVLDEVDCML 273
Score = 49.6 bits (113), Expect = 8e-05
Identities = 23/66 (34%), Positives = 39/66 (59%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
V TF L +LL + G++ P+ IQ +AI + G+ ++A A +G+GKTA+F + I
Sbjct: 109 VLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPI 168
Query: 218 LQQIDT 235
+ + T
Sbjct: 169 ISRCTT 174
Score = 35.9 bits (79), Expect = 1.0
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = +3
Query: 510 RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 689
RGF+DQ+ +F+ LS QV+L SAT+ +V +V ++ + + + + + Q
Sbjct: 275 RGFRDQVMQIFQALS-QPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQL 333
Query: 690 YIAIELEEWK 719
I ++ ++ K
Sbjct: 334 AIWVDAKQKK 343
>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 738
Score = 70.5 bits (165), Expect = 4e-11
Identities = 36/103 (34%), Positives = 56/103 (54%)
Frame = +1
Query: 199 YFLYIDSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 378
Y ++ + +H +LI+APTRELAQQI+ L KC + +GG +V E
Sbjct: 376 YIGHLPPLNDDNRHLGPYALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRSVEEQQ 435
Query: 379 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
L G +++ TPGR+ DM+ + L + + V+DEAD M+
Sbjct: 436 FALRDGAEIIIATPGRLKDMVDKSILVMSQCRYVVMDEADRMV 478
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/56 (41%), Positives = 37/56 (66%)
Frame = +2
Query: 62 LKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
+ ++L I G+++PS IQ++AI +Q RD+I A++G+GKTA F I +L I
Sbjct: 322 IPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYI 377
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/85 (41%), Positives = 50/85 (58%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
SLIL PTRELA QI + + D L K GG + + +E G+ ++V TPGR+
Sbjct: 78 SLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIELGLDILVATPGRLL 137
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D+I ++ +++FVLDEAD ML
Sbjct: 138 DLIETGDINFKALEVFVLDEADTML 162
Score = 49.6 bits (113), Expect = 8e-05
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F +L E ++ + G+++P+ IQ+ I I G D++ AQ+GTGKTA FS+ I+ +
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Score = 37.9 bits (84), Expect = 0.26
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 686
GF + + L Q +L SATMP ++ ++ + DP +I + E +T++ + Q
Sbjct: 165 GFFKDVQSIISKLPKSRQTLLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQ 222
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/84 (41%), Positives = 54/84 (64%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LILAPTRELA QI KVV LG H + + GG + + L+S + ++V TPGR+ +
Sbjct: 76 LILAPTRELAFQIHKVVKQLGAHCPFESNVVTGGFASDKQLEILQSKIDILVATPGRLLN 135
Query: 436 MITRRALHANTIKLFVLDEADEML 507
++++ + + I+L ++DEAD ML
Sbjct: 136 IMSKEFIDLSDIELLIIDEADRML 159
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF++++L +LL I + KP+ IQ AI + +DV+A A +GTGKTA F + LQ
Sbjct: 2 TFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQ 61
>UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep:
Helicase-like - Frankia sp. (strain CcI3)
Length = 374
Score = 70.1 bits (164), Expect = 5e-11
Identities = 36/79 (45%), Positives = 48/79 (60%)
Frame = +1
Query: 268 PTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITR 447
PTRELAQQ+ + L LN + GGT++ I L GVH+VV TPGR+ D++ R
Sbjct: 2 PTRELAQQVNDALEPLTKALNLRLAPVYGGTSISRQISALRRGVHLVVATPGRLTDLVER 61
Query: 448 RALHANTIKLFVLDEADEM 504
A + I++ VLDEAD M
Sbjct: 62 GACVLDGIEITVLDEADFM 80
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 70.1 bits (164), Expect = 5e-11
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LIL PTRELA Q+ V L +GGT+ R I+ + SG VVV TPGR+ D
Sbjct: 100 LILVPTRELAMQVHGVYEQLKGKKLKSAALVMGGTSERNQIQSIRSGARVVVATPGRLED 159
Query: 436 MITRRALHANTIKLFVLDEADEML 507
+ RR + + +++ VLDEAD M+
Sbjct: 160 YMGRRLVDLSQVEMLVLDEADRMM 183
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +2
Query: 17 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKT 196
D + Q + TF+DM L + L + + A F P+ +Q++AI + GRD++A AQ+GTGKT
Sbjct: 19 DPERRQRLTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKT 78
Query: 197 ATFSISILQQI 229
F I L+ +
Sbjct: 79 LAFIIPALEML 89
>UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 617
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE-SGVHVVVGTPG 423
+ ++I++PTRELA+QI K L +GGT RE +R++ G H++VGTPG
Sbjct: 64 IKAIIISPTRELAEQIGKEATRLCQRNGVTVQTAVGGTGKRESLRRIHMEGCHLLVGTPG 123
Query: 424 RVYDMITRR--ALHANTIKLFVLDEADEML 507
R+ D+++ + A+ ++ VLDEAD ML
Sbjct: 124 RLNDLLSDELSGIDASNVQALVLDEADRML 153
Score = 41.9 bits (94), Expect = 0.016
Identities = 18/46 (39%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Frame = +2
Query: 119 IQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRE 247
+Q + ++G+D++AQA++GTGKT F I ++Q+I D S++E
Sbjct: 4 VQSMTLAPALKGKDLVAQAKTGTGKTLAFLIPVIQKILDADPSLKE 49
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LIL PTRELA QI + V +LN + GG ++ + +L GV V+V TPGR+
Sbjct: 78 ALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLL 137
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D+ + A+ + +++ VLDEAD ML
Sbjct: 138 DLEHQNAVKLDQVEILVLDEADRML 162
Score = 66.9 bits (156), Expect = 5e-10
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+FD + L ++LR + G+ +P+ IQQ+AI ++GRD++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 224 QIDT 235
+ T
Sbjct: 62 HLIT 65
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 70.1 bits (164), Expect = 5e-11
Identities = 31/85 (36%), Positives = 51/85 (60%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++++APTRELAQQI++ + +L + + +GG ++ E ++ G +V+ TPGR+
Sbjct: 392 AVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLI 451
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + RR N VLDEAD M+
Sbjct: 452 DCLERRYAVLNQCNYVVLDEADRMI 476
Score = 54.0 bits (124), Expect = 4e-06
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+ ++++ L ELL+ + G++KPS IQ AI +Q RDVI A++G+GKTA F + +
Sbjct: 312 MRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 371
Query: 218 LQQI 229
L I
Sbjct: 372 LAYI 375
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 69.7 bits (163), Expect = 7e-11
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
L+LAPTRELA Q+ + ++ + GG + + + L+ GVHV+VGTPGRV
Sbjct: 87 LVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVHVIVGTPGRVI 146
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + R L + +K VLDEADEML
Sbjct: 147 DHLERGTLDLSELKTLVLDEADEML 171
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISIL 220
F D+ L + +++ + G+E PS IQ I + GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLL 74
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF + + +V + L A QV L SATMP + +++ +++DP+ + + + T I+Q Y
Sbjct: 174 GFIEDVEEVLRKLPASRQVALFSATMPPQIRRIAQTYLQDPIEVTIATKTTTAANIRQRY 233
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 69.7 bits (163), Expect = 7e-11
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLES-GVHVVVGTPGR 426
+L+L PTRELA Q+ K + L + N K GG + + LE+ HVVVGTPGR
Sbjct: 97 ALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDPHVVVGTPGR 156
Query: 427 VYDMITRRALHANTIKLFVLDEADEML 507
+ ++ +RALH ++ VLDEAD ML
Sbjct: 157 IQELARKRALHLGGVRTLVLDEADRML 183
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F + L L GI A G+ + +Q +++ ++G DVIAQA +G+GKTA F + +LQ+
Sbjct: 28 FSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQK 87
Query: 227 IDTSIRECQ 253
+D ++ Q
Sbjct: 88 LDPALTRAQ 96
Score = 37.9 bits (84), Expect = 0.26
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF++ I ++ Q +L SAT PD + ++R ++DP+ I V+ + E +QF+
Sbjct: 186 GFEEPIREIASRCDKHRQSLLFSATFPDIIRTLAREILKDPIEITVEGADNAPEIDQQFF 245
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 69.7 bits (163), Expect = 7e-11
Identities = 36/87 (41%), Positives = 50/87 (57%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ +L+L PTRELA Q+ + +L + GG ++ IR L+ V +VVGTPGR
Sbjct: 72 VQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKRRVDLVVGTPGR 131
Query: 427 VYDMITRRALHANTIKLFVLDEADEML 507
+ D + R L IK V+DEADEML
Sbjct: 132 IIDHLNRGTLDITKIKYLVIDEADEML 158
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRD-VIAQAQSGTGKTATFSISILQ 223
F M L + +L I G+E P+ IQ++ I + G++ VI QAQ+GTGKTA F I +++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 224 QIDTSIRECQ 253
++D + Q
Sbjct: 64 RLDEKANDVQ 73
Score = 36.3 bits (80), Expect = 0.78
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM---RDPVRILVQKEELTLEGIK 683
GF + + + + + Q+++ SATMP ++ ++R M + KE++T++ K
Sbjct: 161 GFIEDVEMILSKTNKEKQILMFSATMPQRIVTLARKHMGNFETVTTVQENKEDITVKKAK 220
Query: 684 QFYIAIELEEWKLETL 731
Q Y I E K+E L
Sbjct: 221 QIYYMIS-ESNKIELL 235
>UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3;
Actinobacteria (class)|Rep: ATP-dependent RNA helicase -
marine actinobacterium PHSC20C1
Length = 757
Score = 69.7 bits (163), Expect = 7e-11
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LILAPTRELAQQI + + + + +GG + + L GV V++ TPGRV
Sbjct: 451 ALILAPTRELAQQIDRTIQPIARSVGLFTTTIVGGVPQYKQVAALTRGVDVIIATPGRVE 510
Query: 433 DMITRRALHANTIKLFVLDEADEM 504
D+I + L + +K+ VLDEAD M
Sbjct: 511 DLIEQGRLDLSQVKVTVLDEADHM 534
Score = 41.5 bits (93), Expect = 0.021
Identities = 17/63 (26%), Positives = 36/63 (57%)
Frame = +2
Query: 41 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISIL 220
++F D+ + + R + + G E P IQ I + G+DV+ + ++G+GKT F ++
Sbjct: 372 KSFLDLGIGSNISRQLASMGAESPFPIQAATIPDVLAGKDVLGRGKTGSGKTIAFGAPLV 431
Query: 221 QQI 229
+++
Sbjct: 432 ERL 434
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 69.7 bits (163), Expect = 7e-11
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+L+PTRELA QI + G ++ + GG +R L+ GVHV + TPGR+ D
Sbjct: 73 LVLSPTRELAVQIAQSFNVYGRNVKFRLTTIFGGVGQNPQVRALKRGVHVAIATPGRLLD 132
Query: 436 MITRRALHANTIKLFVLDEADEML 507
++ + + + K FVLDEAD ML
Sbjct: 133 LMDQGYVDLSQAKTFVLDEADRML 156
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +2
Query: 56 MNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQID 232
M L E + + + P+ IQ +AI ++G D+I AQ+GTGKTA F++ IL Q+D
Sbjct: 1 MQLSEAIQEALATEKYHTPTPIQGQAIPHLLEGSDLIGCAQTGTGKTAAFALPILNQLD 59
Score = 37.5 bits (83), Expect = 0.34
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 686
GF + + L Q I +ATMP V +++ + +PVRI V E T E ++Q
Sbjct: 159 GFMPALKTIVSKLPKQRQTIFFTATMPPKVAQLASGLLNNPVRIEVAPESTTAERVEQ 216
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 69.7 bits (163), Expect = 7e-11
Identities = 34/85 (40%), Positives = 52/85 (61%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++IL PTRELA Q+++ + +L A GG + ++L GV ++V TPGR+
Sbjct: 76 AIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKRLIEGVDLLVATPGRLL 135
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
DM T+RA+ + + + VLDEAD ML
Sbjct: 136 DMYTQRAIRFDEVSVLVLDEADRML 160
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/60 (36%), Positives = 39/60 (65%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F + L L++ + G+ P+ IQ +AI + + G++V+A AQ+GTGKTA+F + +L +
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 69.7 bits (163), Expect = 7e-11
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F D NL+EE+L+ I + GFE PS +Q AI ++ +DVI QA+SG GKTA F +S+L
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEHKDVICQAKSGKGKTAVFVLSLLHM 189
Query: 227 ID 232
ID
Sbjct: 190 ID 191
Score = 56.0 bits (129), Expect = 9e-07
Identities = 39/94 (41%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQK----VVIALGDHLNAKCHACIGGTNVREDIRQLES-GVHVVV 411
+ +L+L T ELA QI K I L D + K IGG V +R L+S V + V
Sbjct: 199 VQALVLCNTHELAMQIYKEFTRFAINLPD-IKDKILCAIGGVTVSLHVRALKSKDVSIAV 257
Query: 412 GTPGRVYDMITRRALHANTIKLFVLDEADEMLSE 513
GT GRV D++ R AL + IK VLDE D + E
Sbjct: 258 GTIGRVSDLVERGALDLSFIKYLVLDEFDALFKE 291
Score = 35.9 bits (79), Expect = 1.0
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 525 QIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP-VRILVQKEELTLEGIKQFYIAI 701
+I + + A Q +L +AT + + +R +RD V ILV ++L L G+ Q+Y
Sbjct: 297 KIAGLISKMPATHQTLLFTATFTEHSEKFARSILRDGYVAILVDDKQLVLTGLMQYYFNA 356
Query: 702 ELEEWKLETLCD 737
EE KL L D
Sbjct: 357 P-EEKKLHILLD 367
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 69.7 bits (163), Expect = 7e-11
Identities = 33/87 (37%), Positives = 53/87 (60%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ L++ PTRELA Q+ + + +G + A GG + R ++ LE H+VVGTPGR
Sbjct: 71 VQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKALEELPHIVVGTPGR 130
Query: 427 VYDMITRRALHANTIKLFVLDEADEML 507
+ + + R + + I++ VLDEAD+ML
Sbjct: 131 LLEHMRREYVRTSDIRIAVLDEADKML 157
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/61 (40%), Positives = 44/61 (72%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F ++NL ++R ++ GFE+ + IQ++AI ++G+D+I QA++GTGKTA F I +++
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 227 I 229
I
Sbjct: 64 I 64
Score = 42.3 bits (95), Expect = 0.012
Identities = 24/73 (32%), Positives = 40/73 (54%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF D+ + K L Q +L SAT+ V ++R +++DP I ++E +T+ Q+Y
Sbjct: 160 GFIDEAEKILKKLPERRQTLLFSATLSPPVQMLARKYLKDPELIEFEEEGITVPTTVQYY 219
Query: 693 IAIELEEWKLETL 731
I + E+ K E L
Sbjct: 220 IEMP-EKQKFEAL 231
>UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG425
homolog; n=4; Mycoplasma|Rep: Probable ATP-dependent RNA
helicase MG425 homolog - Mycoplasma pneumoniae
Length = 450
Score = 69.7 bits (163), Expect = 7e-11
Identities = 33/85 (38%), Positives = 53/85 (62%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L++APTRELA+QI+ I H + K + IGG + + ++QLE+ +VVGT GRV
Sbjct: 76 TLVVAPTRELAEQIKTTFINFAKHTHLKVVSLIGGIPIWQQLKQLENQPEIVVGTMGRVM 135
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D++ R + ++ ++DE D ML
Sbjct: 136 DLLERGVIKFEHLEHLIIDEVDLML 160
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/62 (30%), Positives = 37/62 (59%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF+++ + L+ + +P+ IQQ AI +Q +++I + +GTGKTA F I +++
Sbjct: 4 TFNELGVSPALIATLKDNNINQPTTIQQLAIPQFLQHQNLIVHSPTGTGKTAVFGIPVIE 63
Query: 224 QI 229
+
Sbjct: 64 TL 65
>UniRef50_P25808 Cluster: ATP-dependent rRNA helicase SPB4; n=10;
Saccharomycetales|Rep: ATP-dependent rRNA helicase SPB4
- Saccharomyces cerevisiae (Baker's yeast)
Length = 606
Score = 69.7 bits (163), Expect = 7e-11
Identities = 37/106 (34%), Positives = 64/106 (60%), Gaps = 8/106 (7%)
Frame = +1
Query: 214 DSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNA-----KCHACIG--GTNVRE 372
++ T+++K + SLI+APTREL++QI+ VV++ +H + KC +G VR+
Sbjct: 73 EANTSKFKKAHFHSLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRD 132
Query: 373 DIRQ-LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
D+ L + +++GTPGRV D + A+ + + V+DEAD +L
Sbjct: 133 DVSNFLRNRPQILIGTPGRVLDFLQMPAVKTSACSMVVMDEADRLL 178
Score = 37.5 bits (83), Expect = 0.34
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 83 GIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
G+ GFE + +Q I +DV+ + +G+GKTA F I +L+++
Sbjct: 21 GLDVMGFETMTPVQASTIPMLAGNKDVVVDSVTGSGKTAAFVIPVLEKV 69
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 69.7 bits (163), Expect = 7e-11
Identities = 35/85 (41%), Positives = 48/85 (56%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++IL+PTRELA QI K GGT V + IR+LE GV ++V TPGR+
Sbjct: 227 AVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLN 286
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D++ R + ++ LDEAD ML
Sbjct: 287 DLLERGRVSLQMVRFLALDEADRML 311
Score = 50.4 bits (115), Expect = 5e-05
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = +2
Query: 14 LDTDWDQV---VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSG 184
++T D V V TF +++L E L I + KP+ +Q+ AI GRD++A AQ+G
Sbjct: 134 IETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTG 193
Query: 185 TGKTATFSISILQQI 229
+GKTA F I+ I
Sbjct: 194 SGKTAAFCFPIISGI 208
>UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetales|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 597
Score = 69.7 bits (163), Expect = 7e-11
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES-----GVHVVVGT 417
+L+LAPTRELA QI + G L + IGG +E + Q+++ GVH+VVGT
Sbjct: 266 ALVLAPTRELALQITQEAEKFGKQLGFNVLSIIGGRQYQETMDQIDNMIVGRGVHIVVGT 325
Query: 418 PGRVYDMITRRALHANTIKLFVLDEADEML 507
PGR+ D + R+ L+ + V+DEAD M+
Sbjct: 326 PGRLLDSVERKILNFSKCYYLVMDEADRMI 355
Score = 47.2 bits (107), Expect = 4e-04
Identities = 18/62 (29%), Positives = 40/62 (64%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
++D+ L ++L + ++GF +P+ +Q+ +I ++ RDV+ A++G+GKT F + +L
Sbjct: 186 SWDESGLDPKILASLKSFGFRQPTPVQRASIPISLELRDVVGVAETGSGKTLAFLLPLLH 245
Query: 224 QI 229
+
Sbjct: 246 YL 247
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 69.7 bits (163), Expect = 7e-11
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++ILAPTRELAQQI++ I G L + A IGG + + +L G +V+ TPGR+
Sbjct: 471 AIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLI 530
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D++ R L + VLDEAD M+
Sbjct: 531 DVLENRYLVLSRCTYVVLDEADRMI 555
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/66 (37%), Positives = 42/66 (63%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+ ++ D +L +L I G+++P+ IQ++AI +Q RD+I A++G+GKTA F I +
Sbjct: 390 IRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPL 449
Query: 218 LQQIDT 235
L I T
Sbjct: 450 LVWITT 455
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 69.3 bits (162), Expect = 9e-11
Identities = 35/86 (40%), Positives = 50/86 (58%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+L PTRELA Q+++ + +G K A G + +L+ H+VVGTPGRV
Sbjct: 75 ALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTPGRVL 134
Query: 433 DMITRRALHANTIKLFVLDEADEMLS 510
D I + L +K V+DEADEML+
Sbjct: 135 DHIEKGTLSLERLKYLVIDEADEMLN 160
Score = 51.2 bits (117), Expect = 3e-05
Identities = 19/64 (29%), Positives = 41/64 (64%)
Frame = +2
Query: 41 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISIL 220
++F + L +E+ R + G+E P+ +Q I +Q +D++ ++Q+G+GKTA+F I +
Sbjct: 4 KSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLC 63
Query: 221 QQID 232
+ ++
Sbjct: 64 EMVE 67
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/75 (33%), Positives = 38/75 (50%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF DQ+ + L +L SAT+P+DV +SR +M P I ++ +T + I+
Sbjct: 162 GFIDQVEAIIDELPTKRMTMLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTL 221
Query: 693 IAIELEEWKLETLCD 737
+ EE KL L D
Sbjct: 222 FEVR-EEEKLSLLKD 235
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 69.3 bits (162), Expect = 9e-11
Identities = 39/86 (45%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRV 429
+L+L PTRELA Q+ V L LN K GG R LE G HV+VGTPGRV
Sbjct: 92 ALVLCPTRELAHQVADEVRKLAKSMLNIKILTLCGGEPSRIQTNSLEHGAHVLVGTPGRV 151
Query: 430 YDMITRRALHANTIKLFVLDEADEML 507
D + +R + + + VLDEAD ML
Sbjct: 152 LDHLEQRNVDLSMLTTLVLDEADRML 177
>UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 634
Score = 69.3 bits (162), Expect = 9e-11
Identities = 35/87 (40%), Positives = 48/87 (55%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++++ PT ELAQQI + + + H GG NVR D+ QL SGV V+V TPGR+
Sbjct: 289 AIVVVPTHELAQQILFEGMKFATGTSVRVHLTHGGVNVRHDLMQLRSGVSVLVATPGRLL 348
Query: 433 DMITRRALHANTIKLFVLDEADEMLSE 513
I + + VLDEAD +L E
Sbjct: 349 HFIRSGLISLSMCNFIVLDEADRLLDE 375
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 35 VVETF-DDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSI 211
V+E F D +L + + I + P+ +Q+ + + GRD +A AQ+G+GKTA F +
Sbjct: 203 VIEHFMDATDLPDTVKTNIDRANYAVPTPVQRFLLPVLLAGRDALATAQTGSGKTAAFML 262
Query: 212 SILQQI 229
IL+ +
Sbjct: 263 PILKTV 268
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 69.3 bits (162), Expect = 9e-11
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LI+ PTRELA QI K + LN C GG+++ I +L+ G ++VGTPGR+ D
Sbjct: 394 LIMTPTRELALQIHKELNHFTKKLNISSCCCFGGSSIESQIAELKKGAQIIVGTPGRIID 453
Query: 436 MI---TRRALHANTIKLFVLDEADEM 504
++ + R + + VLDEAD M
Sbjct: 454 LLAANSGRVTNLQRVTYLVLDEADRM 479
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/43 (41%), Positives = 30/43 (69%)
Frame = +2
Query: 101 FEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
+ PS+IQ +AI + GRD+I A++G+GKT +F + +L+ I
Sbjct: 337 YSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLPLLRHI 379
Score = 32.7 bits (71), Expect = 9.7
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF+ Q+ VF + D Q +L SAT P + +++ + +P+ I+V + I Q
Sbjct: 483 GFEPQVTKVFTRVRPDRQTVLFSATFPRKMELLAKKILDNPMEIVVGGISVVASEITQKV 542
Query: 693 IAIELEEWK 719
E E+ K
Sbjct: 543 ELFENEDDK 551
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 69.3 bits (162), Expect = 9e-11
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF D+ LK +L + G+EKPS IQ I + GRDV+ AQ+G+GKTA FS+ +LQ
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 224 QIDTSIRECQV 256
+D ++ Q+
Sbjct: 67 NLDPELKAPQI 77
Score = 66.9 bits (156), Expect = 5e-10
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
L+LAPTRELA Q+ + + H+ A GG +R L G +VVGTPGR+
Sbjct: 78 LVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLL 137
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + R L + + VLDEADEML
Sbjct: 138 DHLKRGTLDLSKLSGLVLDEADEML 162
Score = 41.1 bits (92), Expect = 0.028
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF + + + + Q L SATMP+ + ++R FM++P + +Q T I Q Y
Sbjct: 165 GFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSY 224
>UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=2; Enterococcus|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 433
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/86 (37%), Positives = 50/86 (58%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LI+AP++ELA QI +V L K IGG NV I +L+ V++GTPGR+ +
Sbjct: 71 LIIAPSQELAMQIAEVARTWAKPLQLKVQTLIGGANVSRQIDKLKKRPEVLIGTPGRILE 130
Query: 436 MITRRALHANTIKLFVLDEADEMLSE 513
++ + + A +K V+DE D++ E
Sbjct: 131 LMKNKKVKAQLLKTIVMDEVDQLFQE 156
Score = 37.9 bits (84), Expect = 0.26
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +2
Query: 92 AYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQID 232
A GF +PS IQ+++ +G +V+ + +GTGKT + + +L ++
Sbjct: 17 ASGFNEPSTIQEKSFTPLREGENVLGISPTGTGKTLAYMLPLLLTVE 63
>UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=20; Bacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 436
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIAL------GDHLNAKCHACIGGTNVREDIRQLESGVHVVVGT 417
+I APTRELAQQI + ++ L + A+C IGGT+ + I +L+ H+VVGT
Sbjct: 76 VITAPTRELAQQIYEEIVKLTKFCAEDQMITARC--LIGGTDKQRSIEKLKKQPHIVVGT 133
Query: 418 PGRVYDMITRRALHANTIKLFVLDEADEML 507
PGR+ D++ +AL + ++DEAD ML
Sbjct: 134 PGRIKDLVEEQALFVHKANTIIVDEADLML 163
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +2
Query: 41 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISIL 220
+TF + K L+ + F +P+ IQQ+ +G VI Q+Q+G+GKT + + L
Sbjct: 4 QTFTQYDFKPFLIDAVRELRFTEPTGIQQKIFPVVKKGVSVIGQSQTGSGKTHAYLLPTL 63
Query: 221 QQIDTSIRECQV 256
+I+ E Q+
Sbjct: 64 NRINPGREEVQL 75
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 68.9 bits (161), Expect = 1e-10
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Frame = +1
Query: 256 LILAPTRELAQQI----QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPG 423
LIL PTRELA+QI +++ IA + GG + I L++G VV+GTPG
Sbjct: 113 LILTPTRELARQIHEEFEQMKIATPRTNRMEAVLIYGGVGYQPQIDGLKNGAQVVIGTPG 172
Query: 424 RVYDMITRRALHANTIKLFVLDEADEMLS 510
R+ D I + A+T+++ VLDEADEMLS
Sbjct: 173 RILDHIKKDNFDASTLRMLVLDEADEMLS 201
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/65 (30%), Positives = 38/65 (58%)
Frame = +2
Query: 62 LKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQIDTSI 241
L + + ++A G+ + +Q++AI + GRD+I Q+Q+G+GKT F + + ++
Sbjct: 48 LSGHMEQAVHAAGWTELMDVQRKAIPYTLDGRDLIVQSQTGSGKTGAFLLPLFDLVNPDK 107
Query: 242 RECQV 256
E QV
Sbjct: 108 EEQQV 112
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/91 (37%), Positives = 50/91 (54%)
Frame = +1
Query: 235 KHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVG 414
+HS +LIL PTRELA Q+ + A H+N GG + ++L+ G ++V
Sbjct: 71 QHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQKLKQGADIIVA 130
Query: 415 TPGRVYDMITRRALHANTIKLFVLDEADEML 507
TPGR+ + I L + ++ VLDEAD ML
Sbjct: 131 TPGRLLEHIVACNLSLSNVEFLVLDEADRML 161
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+ + E+LR I G++ + +QQ+AI +G DV+A AQ+GTGKTA F++ ILQ+
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 227 I 229
+
Sbjct: 63 M 63
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/94 (37%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Frame = +1
Query: 235 KHS*MSSLILAPTRELAQQIQKVVIALGDHL--NAKCHACIGGTNVREDIRQLESGVHVV 408
K+ +++L+L PTRELA Q+ +V A + L K A GG ++ + QL+ GV ++
Sbjct: 78 KNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQMIQLQ-GVEIL 136
Query: 409 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 510
+ TPGR+ D++ +A++ + +++ VLDEAD+ML+
Sbjct: 137 IATPGRLLDLVDSKAVYLSDVEVLVLDEADKMLN 170
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/64 (34%), Positives = 40/64 (62%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F + L +L+ + + P IQ++AI ++G+D++ AQ+G+GKTA+F + ILQ
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQ 69
Query: 224 QIDT 235
+ T
Sbjct: 70 MLQT 73
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GFK+++ ++FK+L Q +L SAT+ DV ++ + DPV+I + EE ++ I+Q
Sbjct: 172 GFKEEMANIFKLLPQKRQNLLFSATLGKDVDTITEFLLHDPVKIEIIAEEQNIDLIQQIA 231
Query: 693 IAIE 704
A+E
Sbjct: 232 YAVE 235
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/85 (41%), Positives = 51/85 (60%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LIL+PTRELA QI + + L + GG +VR I+ L GV ++V TPGR+
Sbjct: 80 ALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQALARGVDILVATPGRLL 139
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D++ +RA+ + +LDEAD ML
Sbjct: 140 DLMEQRAIDLRETRHLILDEADRML 164
Score = 56.0 bits (129), Expect = 9e-07
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TFD L E L R + P+ IQ+RAI + GRD++ AQ+GTGKTA F++ +L
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 224 QIDT 235
+ T
Sbjct: 65 HLMT 68
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/84 (39%), Positives = 49/84 (58%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LILAPTREL QI+K ALG + A GG + + L++G +V+GTPGR+
Sbjct: 77 ALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDALKAGADIVIGTPGRLI 136
Query: 433 DMITRRALHANTIKLFVLDEADEM 504
D + ++ ++ V+DEAD M
Sbjct: 137 DYLKQKVYSVKDVEALVIDEADRM 160
Score = 56.8 bits (131), Expect = 5e-07
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F ++ + E+ +GI GF + + IQ++A+ + G+DV QAQ+GTGKTATF ISI +
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 227 I 229
+
Sbjct: 63 L 63
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDH--LNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+LILAPT EL QI K + L + L IG N+ I +L+ H++VG+ GR
Sbjct: 74 ALILAPTHELVMQIDKQIKTLSSNAGLTINSTVMIGEVNIVRQIEKLKEKPHIIVGSTGR 133
Query: 427 VYDMITRRALHANTIKLFVLDEADEMLSE 513
V ++I R+ + ++TIK V+DEAD +L +
Sbjct: 134 VLELIKRKKISSHTIKTIVIDEADMLLDQ 162
Score = 62.9 bits (146), Expect = 8e-09
Identities = 27/73 (36%), Positives = 48/73 (65%)
Frame = +2
Query: 35 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSIS 214
+V +FD + + ++ G+ G + P+AIQ+ AI ++ +D+I Q+Q+G+GKT + +
Sbjct: 1 MVTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLP 60
Query: 215 ILQQIDTSIRECQ 253
I Q+ID+S RE Q
Sbjct: 61 IFQKIDSSKRETQ 73
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/86 (41%), Positives = 47/86 (54%)
Frame = +1
Query: 250 SSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRV 429
++LIL+PTREL+ QI + K GG + + R LE GV ++V TPGR+
Sbjct: 198 TALILSPTRELSCQIHEEAKKFSYKTGLKVVVAYGGAPISQQFRNLERGVDILVATPGRL 257
Query: 430 YDMITRRALHANTIKLFVLDEADEML 507
DMI R + IK LDEAD ML
Sbjct: 258 VDMIERARVSLRMIKYLALDEADRML 283
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2
Query: 56 MNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISIL 220
++L E L + I + KP+ IQ+ AI + GRD++A AQ+G+GKTA F I+
Sbjct: 125 IHLGEGLNQNIRRCKYVKPTPIQRHAIPIAMAGRDLMACAQTGSGKTAAFCFPII 179
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/62 (46%), Positives = 46/62 (74%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+D LK ELL GI+ G+EKPS IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 227 ID 232
+D
Sbjct: 158 LD 159
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +2
Query: 35 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSIS 214
V E F DM L +ELL+ IY GFEKPS IQ+ AI ++G +V+ Q++SGTGKT ++
Sbjct: 49 VAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRGHNVVVQSKSGTGKTIAYTCG 108
Query: 215 IL 220
+L
Sbjct: 109 VL 110
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/86 (31%), Positives = 47/86 (54%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
+++ PTREL+ Q+ +V+ L L K + + + + I G VVVG+PG +
Sbjct: 122 MVVTPTRELSTQVTEVISGLAGPLGIKVFSALKN-KITDSI-----GEEVVVGSPGTILK 175
Query: 436 MITRRALHANTIKLFVLDEADEMLSE 513
++ L+ +K+ VLDEAD +L +
Sbjct: 176 LMELGKLNYKGVKMIVLDEADILLDK 201
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LIL PTRELAQQI+ L +C + +GG ++ + L G +V+ TPGR+
Sbjct: 346 ALILVPTRELAQQIETETNKFAGRLGLRCVSIVGGRDMNDQAYALRDGAEIVIATPGRLK 405
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D I R L + V+DEAD+M+
Sbjct: 406 DCIERHVLVLSQCTYVVMDEADKMV 430
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/64 (35%), Positives = 41/64 (64%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+ ++ + + +L I G+++PS IQ++AI +Q RD+I A++G+GKTA+F I +
Sbjct: 266 LRSWRESGIPASILSTIEEVGYKEPSPIQRQAIPIGLQNRDLIGIAETGSGKTASFLIPL 325
Query: 218 LQQI 229
L I
Sbjct: 326 LAYI 329
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/85 (42%), Positives = 48/85 (56%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+L PTRELA+Q+Q + H + GG + IRQLE VVV TPGR+
Sbjct: 72 ALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQLERA-DVVVATPGRLL 130
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D I R + +++ VLDEAD ML
Sbjct: 131 DHIERGTIDLGDVEILVLDEADRML 155
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/65 (36%), Positives = 43/65 (66%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+E+F + +++ +LR I FE+P+ IQ+ AI ++G+D+I A +G+GKT F I
Sbjct: 1 MESFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGI 60
Query: 218 LQQID 232
+Q+I+
Sbjct: 61 IQKIE 65
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGVHVVVGTPG 423
+ +L+L+PTRELA Q + L + I GG + +R L+ V VV+GTPG
Sbjct: 74 VQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRALKGTVQVVIGTPG 133
Query: 424 RVYDMITRRALHANTIKLFVLDEADEML 507
RV D I R LH +++ +F+LDEAD+ML
Sbjct: 134 RVIDHIKRGTLHLDSVTMFILDEADQML 161
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/74 (44%), Positives = 48/74 (64%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF++ I D+F+ D Q IL SATMP +L+++R F RDP + + ++ELT+ I+Q Y
Sbjct: 164 GFREDIEDIFRDTPKDRQTILFSATMPQPILDITRRFQRDPQFVKITRKELTVPQIEQTY 223
Query: 693 IAIELEEWKLETLC 734
I + E KLE LC
Sbjct: 224 IEVR-ERDKLEALC 236
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/71 (45%), Positives = 46/71 (64%)
Frame = +2
Query: 41 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISIL 220
+TF + + EELL+ I GFE+P+ IQ AI + G+DV QAQ+GTGKTA F I I+
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPII 64
Query: 221 QQIDTSIRECQ 253
+++D + Q
Sbjct: 65 ERLDPDNKNVQ 75
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/86 (40%), Positives = 52/86 (60%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LIL PTRELA Q+++ + +G K A G ++ + +L+ H+VVGTPGRV
Sbjct: 73 ALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVL 132
Query: 433 DMITRRALHANTIKLFVLDEADEMLS 510
D I + L + + V+DEADEML+
Sbjct: 133 DHIEKGTLPLDRLSYLVIDEADEMLN 158
Score = 48.8 bits (111), Expect = 1e-04
Identities = 17/59 (28%), Positives = 38/59 (64%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
F + + ++LR + G+ +P+ +QQ I ++ +D++ ++Q+G+GKTA+F I + +
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCE 62
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/75 (34%), Positives = 41/75 (54%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF +Q+ + K L + +L SAT+P D+ ++SR +M++P I V+ LT I+
Sbjct: 160 GFIEQVEAIIKHLPTERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAV 219
Query: 693 IAIELEEWKLETLCD 737
I + EE K L D
Sbjct: 220 IQVR-EENKFSLLKD 233
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 68.9 bits (161), Expect = 1e-10
Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Frame = +1
Query: 211 IDSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 390
+DS + K + ++ L++APTRELA Q ++ + LG + GG + +E +R L
Sbjct: 228 LDSGKKKAKGAQVNVLVIAPTRELAIQTEENMAKLGKSMGIGMICLYGGVSKQEQVRLLN 287
Query: 391 SG--VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSE 513
V +VVGTPGRV DM +L + + VLDEAD ML +
Sbjct: 288 QSPPVRIVVGTPGRVLDMARDGSLDLSGVTYLVLDEADRMLDK 330
Score = 37.5 bits (83), Expect = 0.34
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 98 GFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQIDT 235
GF P+ IQ +Q +DV+ A++G+GKT F + LQ + T
Sbjct: 178 GFSTPTPIQACCWPVLLQNKDVVGIAETGSGKTFAFGLPALQHLVT 223
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/85 (40%), Positives = 49/85 (57%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LILAPTREL QQ+ N A +GG N E + L++GV +++ TPGR+ +
Sbjct: 139 LILAPTRELCQQVYTESKRYAKIYNISVGALLGGENKHEQWKMLKAGVEILIATPGRLME 198
Query: 436 MITRRALHANTIKLFVLDEADEMLS 510
MI ++A + V+DEAD+M S
Sbjct: 199 MIQKKATNLRRCTYVVIDEADKMFS 223
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/64 (37%), Positives = 40/64 (62%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+ +F + EEL+R I GFEKP+ IQ +A+ + GRD++ A++G+GKT ++ +
Sbjct: 61 IVSFGHLGFDEELMRQITKLGFEKPTQIQCQALPCGLSGRDIVGVAKTGSGKTVSYLWPL 120
Query: 218 LQQI 229
L I
Sbjct: 121 LIHI 124
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 686
GF+ QI + + + D Q +L +AT+ + + +R+PV I + E E I+Q
Sbjct: 225 GFEKQIRSIMQQIRPDRQTLLFTATLKKKIQNLVMDVLRNPVTIKIGGENQANEDIRQ 282
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/103 (34%), Positives = 57/103 (55%)
Frame = +1
Query: 199 YFLYIDSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 378
Y L + ++ + K + ++I+ PTRELA Q +V LG K GG ++ +
Sbjct: 50 YLLPVLNSVEKLKGKSVKAIIILPTRELALQTHRVASRLGKISGIKSTIVYGGASIIRQV 109
Query: 379 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
+L G +V+GTPGR+ D+ ++ L + +K VLDEAD ML
Sbjct: 110 EELP-GSDIVIGTPGRILDLYNQKYLKLDHVKYLVLDEADLML 151
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/59 (32%), Positives = 39/59 (66%)
Frame = +2
Query: 56 MNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQID 232
M++ E L + + F +P+ IQ++AI + G+DVI ++++G+GKTA + + +L ++
Sbjct: 1 MDISENLKKSLGLMKFTEPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNSVE 59
Score = 37.5 bits (83), Expect = 0.34
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF D I + Q ILLSAT+P +V ++ FM +P + +E IK Y
Sbjct: 154 GFIDDIKKIISFTPEGRQTILLSATLPAEVKTIANHFMNNPEFVDAGGDEAIPSSIKHLY 213
Query: 693 IAIE 704
E
Sbjct: 214 TVSE 217
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV-HVVVGTPGRV 429
+LILAPT+ELA QI +V L + IGG N++ + +L+ HV VGTPGR+
Sbjct: 73 ALILAPTQELAMQIVEVAKQLTATTSITVLPLIGGANIKRQVEKLKKKKPHVAVGTPGRI 132
Query: 430 YDMITRRALHANTIKLFVLDEADEMLSE 513
+++ + L +K+ V+DEAD M+ E
Sbjct: 133 LELMEMKKLKVPHVKMIVVDEADRMMEE 160
Score = 41.5 bits (93), Expect = 0.021
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F + E L + G +P+ IQQ+ I + G+++I +Q+GTGKT + + +L +
Sbjct: 4 FQQWPIGEPFLEALTNQGITEPTEIQQQVIPEALDGQNLIVHSQTGTGKTLAYLLPMLTK 63
Query: 227 ID 232
+
Sbjct: 64 TE 65
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQ---KVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGT 417
+ +LI+APTRELA QI K ++ + +N A GG +V + +R+L+ H+VV T
Sbjct: 74 VQALIVAPTRELALQITTEIKKMLVQREDINVL--AIYGGQDVAQQLRKLKGNTHIVVAT 131
Query: 418 PGRVYDMITRRALHANTIKLFVLDEADEML 507
PGR+ D I R + + + VLDEAD+ML
Sbjct: 132 PGRLLDHIRRETIDLSNLSTIVLDEADQML 161
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/72 (31%), Positives = 42/72 (58%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
++ F ++ + E + G + + IQ++AI + G+D+I QA++GTGKT F + I
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 218 LQQIDTSIRECQ 253
L++ID + Q
Sbjct: 64 LEKIDPESSDVQ 75
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 686
GF I D+ Q +L SAT+P D+ ++++ +M +P I VQ EE+T++ I+Q
Sbjct: 164 GFLYDIEDILDETPGSKQTMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQ 221
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVHVVVGTPGRV 429
+L+L PTRELA Q+ K + L N K GG + + + L H+VVGTPGR+
Sbjct: 75 ALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSLVHAPHIVVGTPGRI 134
Query: 430 YDMITRRALHANTIKLFVLDEADEML 507
D + +++L +++K+ VLDEAD ML
Sbjct: 135 QDHLRKQSLALDSLKVLVLDEADRML 160
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F + L E L + G+ + + +Q + + G DV A+A++G+GKTA F I +L
Sbjct: 5 SFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGLLD 64
Query: 224 QIDTS 238
+I S
Sbjct: 65 RIVVS 69
Score = 37.5 bits (83), Expect = 0.34
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR--ILVQKEELTLEGIKQ 686
GF D I DV +D Q +L SAT P ++ ++S R P R I EE +E ++
Sbjct: 163 GFTDAIDDVISYTPSDRQTLLFSATYPQEIEQISARVQRQPQRFEIADDVEESAIE--QR 220
Query: 687 FY 692
FY
Sbjct: 221 FY 222
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/87 (39%), Positives = 51/87 (58%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ +L+L PTRELA QI + A G + K GG + L SG+ ++V TPGR
Sbjct: 72 IKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSGIQILVATPGR 131
Query: 427 VYDMITRRALHANTIKLFVLDEADEML 507
+ D+I++ + +++ FVLDEAD ML
Sbjct: 132 LLDLISQGFISLSSLDFFVLDEADRML 158
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/62 (45%), Positives = 46/62 (74%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF+++NL E +L+ + G+ P+ IQ+++I +QG+D++ AQ+GTGKTA FSI ILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 224 QI 229
++
Sbjct: 62 KL 63
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/85 (36%), Positives = 49/85 (57%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LIL PTRELA Q+ V A H + GG ++ + +L GV +++ TPGR+
Sbjct: 90 ALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLL 149
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + ++ + +++ VLDEAD ML
Sbjct: 150 DHVQQKTANLGQVQILVLDEADRML 174
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TFD L E+L+ I G+ P+ IQ +AI + GRDV+ AQ+GTGKTA+FS+ I+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 224 QI 229
++
Sbjct: 72 RL 73
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/85 (40%), Positives = 49/85 (57%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
SL+L PTRELA Q+ + H+ IGG + +E + ++ GV V++ TPGR+
Sbjct: 85 SLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQAIDKGVDVLIATPGRLL 144
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D R L N +K+ V+DEAD ML
Sbjct: 145 DHFERGKLILNDVKVMVVDEADRML 169
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/69 (39%), Positives = 44/69 (63%)
Frame = +2
Query: 23 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTAT 202
DW + TF D++L ++ + I G+E P+ IQ AI + GRDV+ AQ+GTGKTA+
Sbjct: 6 DWTPMT-TFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTAS 64
Query: 203 FSISILQQI 229
F++ ++ +
Sbjct: 65 FTLPMITML 73
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/84 (39%), Positives = 50/84 (59%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++I+ PTRELA+QIQ V+ ALG + + GG + I++L GV + V PGR+
Sbjct: 73 AMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGVEIAVVCPGRLL 132
Query: 433 DMITRRALHANTIKLFVLDEADEM 504
D + R L + + +LDEAD+M
Sbjct: 133 DHLERGTLTLEHLDMLILDEADQM 156
Score = 56.8 bits (131), Expect = 5e-07
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+FD ++ GI G+ P+ IQ++ I + GRDVI AQ+GTGKTA F + ILQ
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 224 QI 229
++
Sbjct: 62 RL 63
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 650
GF + + ++ A Q +L SATMPD + ++R +R+P I +
Sbjct: 160 GFLPDVRRILRLAPAQRQTMLFSATMPDAIRALAREALREPQTIQI 205
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L++APTRELA QI +LG + + GG N+ + IR+L SGV VVV PGR+
Sbjct: 73 TLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGVDVVVACPGRLL 132
Query: 433 DMITRRALHANTIKLFVLDEADEM 504
D I R + ++ ++DEAD M
Sbjct: 133 DHIWRGTIDVCGVETLIIDEADRM 156
Score = 56.8 bits (131), Expect = 5e-07
Identities = 24/62 (38%), Positives = 42/62 (67%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F+ N ++ G+ A G+++P+ IQ +AI + G DVI AQ+GTGKTA +++ I+Q
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 224 QI 229
++
Sbjct: 62 KM 63
>UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1;
Erythrobacter sp. NAP1|Rep: Cold-shock dead-box protein
A - Erythrobacter sp. NAP1
Length = 598
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L +APTRELA Q+ + + L + C+GG + ++ R L SG +VVGTPGR+ D
Sbjct: 77 LAIAPTRELALQVSRELGWLYAKAGLRIATCVGGMDASKERRALRSGPAIVVGTPGRLRD 136
Query: 436 MITRRALHANTIKLFVLDEADEML 507
+ R AL + + VLDEADEML
Sbjct: 137 HLERGALDLSGLIGVVLDEADEML 160
Score = 42.7 bits (96), Expect = 0.009
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 98 GFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
G+ +P+ +Q A+ GRD+I AQ+G+GKT F I++ Q I
Sbjct: 18 GYSEPTPVQAAAMAPDSAGRDLIVSAQTGSGKTVAFGIALAQDI 61
>UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Shewanella oneidensis
Length = 439
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++I+APTRELA QI K I L H K GG + + L+ GV +++GT GR+
Sbjct: 87 AIIMAPTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQRKVLDQGVDILIGTTGRII 146
Query: 433 DMITRRALHANTIKLFVLDEADEM 504
D + + ++ N I+ VLDEAD M
Sbjct: 147 DYVRQGIINLNAIQAVVLDEADRM 170
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +2
Query: 41 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISIL 220
+ F D+ L E+ + + GFE + IQ ++ +Q +D+ QAQ+GTGKT F ++
Sbjct: 9 QKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATF 68
Query: 221 QQIDTS 238
+ +S
Sbjct: 69 NHLLSS 74
Score = 34.7 bits (76), Expect = 2.4
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Frame = +3
Query: 513 GFKDQIHDVFK-MLSADVQV-ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 686
GF I +F+ M +AD ++ +L SAT+ V E++ M DPV++ + EE T + IK+
Sbjct: 174 GFIKDIRFLFRRMPNADQRLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSKNIKE 233
Query: 687 --FYIAIELEEWKLETLCD 737
FY + E + L TL +
Sbjct: 234 EIFYPSQEDKMRLLLTLIE 252
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/84 (42%), Positives = 47/84 (55%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+LAPTREL QI+KVV N + A GG + + IR L G VV+ TPGR+ D
Sbjct: 164 LVLAPTRELVMQIKKVVDEFCGMFNLRSTAVYGGASSQPQIRALHEGAEVVIATPGRLID 223
Query: 436 MITRRALHANTIKLFVLDEADEML 507
+ + + + VLDEAD ML
Sbjct: 224 LHDQGHAPLSRVTFLVLDEADRML 247
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/61 (31%), Positives = 36/61 (59%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
++ F++ E++ + GF +P+AIQ + + GRD++ AQ+G+GKT +F +
Sbjct: 86 IQKFEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGIAQTGSGKTLSFILPA 145
Query: 218 L 220
L
Sbjct: 146 L 146
Score = 37.1 bits (82), Expect = 0.45
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEEL-TLEGIKQ 686
GF+ Q+ + +A+ Q ++ SAT P +V ++ +M + ++++V EEL T IKQ
Sbjct: 250 GFEPQLRKIIPKTNANRQTLMWSATWPREVRGLAESYMNEYIQVVVGNEELKTNSKIKQ 308
>UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1;
Lactobacillus salivarius subsp. salivarius UCC118|Rep:
ATP-dependent RNA helicase - Lactobacillus salivarius
subsp. salivarius (strain UCC118)
Length = 426
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/86 (38%), Positives = 52/86 (60%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LI+AP++ELA Q+ + L+ +GG NV+ I +L+ VV+GTPGR+ +
Sbjct: 65 LIMAPSQELAAQLTNTIRPWAKLLDLSVIGLLGGANVKRQIEKLKKHPEVVIGTPGRLLN 124
Query: 436 MITRRALHANTIKLFVLDEADEMLSE 513
+I + L + I+ V+DEADEML +
Sbjct: 125 LINLKKLKLHKIESIVIDEADEMLGD 150
>UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Marinomonas|Rep: DEAD/DEAH box helicase domain
protein - Marinomonas sp. MWYL1
Length = 417
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LILAP+RELA+QI VV L H + H IGGT +QL ++V TPGR+ +
Sbjct: 93 LILAPSRELARQIFNVVEQLTKHTRIQSHLIIGGTPYGMQQQQLSEPCDILVATPGRLVE 152
Query: 436 MITRRALHANTIKLFVLDEADEML 507
+ ++ L + FV+DEAD ML
Sbjct: 153 LDEKQWLDLTDVSYFVIDEADRML 176
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = +2
Query: 32 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSI 211
+V +F +++L + + I GFE P+ IQ++AI + G D++A A +GTGKT F
Sbjct: 14 RVYMSFAELDLDFTIEQAISDLGFEAPTEIQEQAIPIALDGSDLLATAPTGTGKTIAFCA 73
Query: 212 SILQQI 229
+Q I
Sbjct: 74 PAVQHI 79
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 68.1 bits (159), Expect = 2e-10
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPGRV 429
+L+LAPTRELA Q+ + ++ GG + + L GVHVVVGTPGRV
Sbjct: 78 ALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRGVHVVVGTPGRV 137
Query: 430 YDMITRRALHANTIKLFVLDEADEML 507
D + + +L + IK VLDEADEML
Sbjct: 138 IDHLEKGSLDLSRIKTMVLDEADEML 163
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F D+ L E LLR + G+E PS IQ I + RDV+ QAQ+GTGKTA+F++ IL +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 227 ID 232
ID
Sbjct: 69 ID 70
Score = 39.5 bits (88), Expect = 0.084
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF D + + + Q L SATMP + ++ ++RDP I V + T + I+Q Y
Sbjct: 166 GFIDDVETILQKTPESRQTALFSATMPSAIKRIATTYLRDPDLITVAAKTGTADNIRQRY 225
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/85 (40%), Positives = 47/85 (55%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+LAPTRELA QI G IGG R++ESGV ++V TPGR+
Sbjct: 133 ALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQARRMESGVDLLVATPGRLL 192
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D + + + ++ VLDEAD+ML
Sbjct: 193 DHVAAGVIRLDAVETVVLDEADQML 217
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = +2
Query: 23 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTAT 202
D V+ F + L E LLR I +E P+ IQ R+I ++G D++ AQ+GTGKTA
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110
Query: 203 FSISILQQI 229
F + IL +I
Sbjct: 111 FVLPILHRI 119
Score = 38.3 bits (85), Expect = 0.19
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF I + L Q ++ SATMP + ++ F+RDP + V E ++ I Q
Sbjct: 220 GFIPAIRQIMAKLPRQRQAVMFSATMPKPIRALAGEFLRDPREVAVSVESKPVDRIDQQV 279
Query: 693 IAIELEEWK 719
+ + EE K
Sbjct: 280 LLLAPEEKK 288
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 68.1 bits (159), Expect = 2e-10
Identities = 38/101 (37%), Positives = 54/101 (53%)
Frame = +1
Query: 205 LYIDSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 384
++ID + + +LILAPTRELAQQI++V G + K GG R+
Sbjct: 147 MHIDQQSRLRRGDGPIALILAPTRELAQQIKQVTDDFGRAMKIKNTCLFGGGAKRQQGDD 206
Query: 385 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
L+ GV +V+ TPGR+ D ++ + VLDEAD ML
Sbjct: 207 LKYGVEIVIATPGRLIDFLSSEHTNLRRCSYLVLDEADRML 247
Score = 38.3 bits (85), Expect = 0.19
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF+++ E+ F P+ IQ + + GRD++ A++G+GKT ++ + L
Sbjct: 88 TFEEVGFPAEIADEWRYAEFTTPTPIQSQGWPIAMSGRDMVGIAKTGSGKTLSYLLPALM 147
Query: 224 QIDTSIR 244
ID R
Sbjct: 148 HIDQQSR 154
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 650
GF+ QI + + + D Q ++ SAT PD V + + +++D ++I V
Sbjct: 250 GFEPQIRAIIEQIRPDHQTLMWSATWPDAVSRLVKDYLKDYIQINV 295
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNA------KCHACIGGTNVREDIRQLESGVHVVVGT 417
+I+ P+RELA+Q +V+ L A + + CIGG++++E ++ GVH+VV T
Sbjct: 127 MIVVPSRELARQTFEVITHFSRALEAHGFPSLRTNLCIGGSSIKEQSDAMKRGVHMVVAT 186
Query: 418 PGRVYDMITRRALHANTIKLFVLDEADEML 507
PGR+ D++ +R + + + VLDEAD M+
Sbjct: 187 PGRLMDLLDKRIITLDVCRYLVLDEADRMI 216
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
V+TF +M +L + G P+ IQ + + + GRD+I A +G+GKT F++ I
Sbjct: 46 VKTFKEMKFPRPILAALKKKGITHPTPIQVQGLPAVLTGRDMIGIAFTGSGKTLVFTLPI 105
Query: 218 L 220
+
Sbjct: 106 I 106
>UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2;
Onygenales|Rep: Putative uncharacterized protein -
Coccidioides immitis
Length = 722
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE-SGVHVVVGTPGRV 429
+++++PTRELA+QI + + + +GGT E +R+++ G H++VGTPGR+
Sbjct: 169 AVVISPTRELAEQIAEEAQKIARFTGVQVRTAVGGTRKIEGLRKIQREGCHLLVGTPGRL 228
Query: 430 YDMIT--RRALHANTIKLFVLDEADEMLSE 513
D+ + R + A +K FVLDEAD +L +
Sbjct: 229 IDIFSDPRSGIAAPNLKAFVLDEADRLLDD 258
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Frame = +2
Query: 68 EELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI---DTS 238
++++ I G + IQ + I + G+DV+AQA++GTGKT F + ++Q+I D S
Sbjct: 93 KKIVDAILKMGITDMTEIQAQTINHTLNGKDVLAQAKTGTGKTLAFLVPVIQKIIRDDPS 152
Query: 239 IRECQ 253
+R Q
Sbjct: 153 LRTGQ 157
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 68.1 bits (159), Expect = 2e-10
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIAL-----GDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTP 420
+I APTRELA QI + + + G + +KC IGGT+ ++ I +L+ H+VVGTP
Sbjct: 76 VITAPTRELANQIYQEALKITQGEEGSQIRSKCF--IGGTDKQKSIDKLKIQPHLVVGTP 133
Query: 421 GRVYDMITRRALHANTIKLFVLDEADEML 507
GR+ D+I +AL + + V+DEAD ML
Sbjct: 134 GRIADLIKEQALSVHKAESLVIDEADLML 162
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/82 (31%), Positives = 44/82 (53%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+ LK ++ ++ GF +P+ IQ+R I ++ VI Q+Q+GTGKT + + +L +
Sbjct: 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNK 65
Query: 227 IDTSIRECQV*SWLPQESWPNK 292
ID + QV P N+
Sbjct: 66 IDPAKDVVQVVITAPTRELANQ 87
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/64 (56%), Positives = 40/64 (62%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F D LK ELLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 227 IDTS 238
I+ S
Sbjct: 108 IEPS 111
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVR--EDIRQLESGVHVVVGT 417
+S+L+L TRELA QI + +L + K GG N++ +D+ + E H+VVGT
Sbjct: 115 VSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECP-HIVVGT 173
Query: 418 PGRVYDMITRRALHANTIKLFVLDEADEMLSEV 516
PGRV + + L ++ F+LDE D+ML +
Sbjct: 174 PGRVLALAREKDLSLKNVRHFILDECDKMLESL 206
Score = 52.8 bits (121), Expect = 8e-06
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = +3
Query: 528 IHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE-ELTLEGIKQFYIAI- 701
+ ++FKM D QV++ SAT+ ++ V + FM+DP+ I V E +LTL G+ Q YI +
Sbjct: 212 VQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLS 271
Query: 702 ELEEW-KLETLCD 737
E+E+ KL L D
Sbjct: 272 EMEKTRKLNDLLD 284
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+++++PTRELA QI K LN + C+GG+++ EDI ++ G VV+ TPGR+
Sbjct: 479 AVVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSISEDIAAMKKGAEVVICTPGRMI 538
Query: 433 DMITR---RALHANTIKLFVLDEADEM 504
D++T R + V+DEAD M
Sbjct: 539 DLLTANNGRVTNVRRTTYIVMDEADRM 565
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +2
Query: 23 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTAT 202
D + V + L + L I G+E P++IQ +AI + GRDVI A++G+GKT
Sbjct: 397 DAPKPVRNWGAFGLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVA 456
Query: 203 FSISILQQI 229
F + +L+ +
Sbjct: 457 FLLPMLRHV 465
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 68.1 bits (159), Expect = 2e-10
Identities = 38/103 (36%), Positives = 54/103 (52%)
Frame = +1
Query: 199 YFLYIDSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 378
Y + R K + LILAPTRELA QI+ + L K + +GG + +E
Sbjct: 224 YICELPKLDERSKVNGPYGLILAPTRELAMQIKDEAVKFCAPLGFKVVSVVGGYSAQEQA 283
Query: 379 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
++ G ++V TPGR+ D+I RR L N V+DEAD M+
Sbjct: 284 LAVQEGAELIVATPGRLLDVIDRRLLVLNQCCYVVMDEADRMV 326
Score = 41.9 bits (94), Expect = 0.016
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +2
Query: 98 GFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
G+++P+ IQ+ AI + RDVI A++G+GKTA+F I ++ I
Sbjct: 182 GYKEPTPIQRAAIPIALGIRDVIGVAETGSGKTASFLIPLISYI 225
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/71 (45%), Positives = 46/71 (64%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
TF+D+ L E +L+ + GFE PS IQQ I + G DV+ AQ+G+GKTA F++ +L
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65
Query: 224 QIDTSIRECQV 256
QID S + Q+
Sbjct: 66 QIDPSEKHPQM 76
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
L++APTRELA Q+ + + GG +R L+ G VVVGTPGR+
Sbjct: 77 LVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGAQVVVGTPGRIL 136
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D I R L+ + ++ VLDEADEML
Sbjct: 137 DHIRRGTLNLSELRFIVLDEADEML 161
Score = 37.9 bits (84), Expect = 0.26
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP--VRILVQKE 659
GF D + V L + Q L SATMP+ + +++ FM DP V+I V E
Sbjct: 164 GFIDDVETVMAELPENHQTALFSATMPEPIRRITKRFMNDPQEVKIKVNNE 214
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 67.7 bits (158), Expect = 3e-10
Identities = 33/85 (38%), Positives = 49/85 (57%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LI++PTREL QI KCH GGT+ ++Q+ GV ++V TPGR+
Sbjct: 384 ALIISPTRELTIQIFDEARKFSKDSVLKCHIIYGGTSTSHQMKQIFQGVDILVATPGRLL 443
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D++ + + + I+ VLDEAD ML
Sbjct: 444 DLVGKGKITFDAIEFVVLDEADRML 468
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/64 (39%), Positives = 40/64 (62%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+ +FD+ NL+ L I G+ KP+ +Q+ I + GRD++A AQ+G+GKTA F I I
Sbjct: 301 ISSFDEANLRVLLNTNIKKSGYTKPTPVQKYGIPILLSGRDLMACAQTGSGKTAAFLIPI 360
Query: 218 LQQI 229
+ +
Sbjct: 361 IHTL 364
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +2
Query: 32 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSI 211
Q + FD LK+ +L+GI GF PS +Q ++I +QG+D+IAQAQ+GTGKTA F+I
Sbjct: 42 QDTQGFDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAI 101
Query: 212 SILQQID 232
IL ++
Sbjct: 102 PILNTLN 108
Score = 60.5 bits (140), Expect = 4e-08
Identities = 34/97 (35%), Positives = 53/97 (54%)
Frame = +1
Query: 217 STTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 396
+T NR K + +LI+ PTRELA QI + ++ LG K GG +++ LE
Sbjct: 105 NTLNRNKD--IEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSIKRQCDLLEKK 162
Query: 397 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
++ TPGR+ D + + + ++ VLDE+DEML
Sbjct: 163 PKAMIATPGRLLDHLQNGRIAHFSPQIVVLDESDEML 199
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF D I ++FK L Q +L SATMP+ + ++ + +P + + ++T + I+Q Y
Sbjct: 202 GFLDDIEEIFKFLPNTRQTLLFSATMPEPIKALAMKILNEPAFVKITPTDVTNQDIEQQY 261
Query: 693 IAI 701
I
Sbjct: 262 YII 264
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ +LI+ PTRELA Q +G + K A GG + +L+ GV V+V TPGR
Sbjct: 84 IQALIIVPTRELALQYATETQKIGKYKGVKAFAIFGGEDSALQQSKLKHGVQVLVATPGR 143
Query: 427 VYDMITRRALHANTIKLFVLDEADEMLS 510
+ D I R + + ++ +LDEADEMLS
Sbjct: 144 LIDFIYSRQIDLSHVETLILDEADEMLS 171
Score = 49.6 bits (113), Expect = 8e-05
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F NL +L+ + F++PS IQ AI + +D+IA +Q+G+GKTAT +I I +
Sbjct: 17 FITFNLDPLILKALDKMNFKEPSRIQTEAIPLIQKKQDLIALSQTGSGKTATCAIPICNR 76
Query: 227 IDTSIRECQ 253
++T + + Q
Sbjct: 77 VNTELTDIQ 85
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 67.7 bits (158), Expect = 3e-10
Identities = 28/70 (40%), Positives = 47/70 (67%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F D+ LK+ +L IY G++KP+ IQ +++ +QG+D + +A++GTGKTA F+I LQ
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQH 66
Query: 227 IDTSIRECQV 256
+ ++ QV
Sbjct: 67 LRAEVQHPQV 76
Score = 53.6 bits (123), Expect = 5e-06
Identities = 30/83 (36%), Positives = 45/83 (54%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LIL P REL +QI + I LG L A + G +++ G V+ TPGR+ D
Sbjct: 77 LILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKLSGVKKSLHGAQVISATPGRLID 136
Query: 436 MITRRALHANTIKLFVLDEADEM 504
+ + L++N I + V+DEAD +
Sbjct: 137 IKEQGLLNSNCINMLVIDEADRL 159
Score = 37.9 bits (84), Expect = 0.26
Identities = 17/63 (26%), Positives = 35/63 (55%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF++ + + K L VQ +L SAT DD+ S+ ++ PV I + + E ++++
Sbjct: 163 GFREAVTSILKDLPKSVQTVLCSATFTDDIKNFSKTLLKKPVIIEDRSNIGSEENLEEWA 222
Query: 693 IAI 701
+++
Sbjct: 223 VSV 225
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
LIL PTREL +Q+ K + L + N K + GG R ++ + G H+VVGTPGR+
Sbjct: 76 LILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKSVAHGAHIVVGTPGRIL 135
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
+ + +L + ++ VLDEAD ML
Sbjct: 136 KHLNKSSLSLDHVRTLVLDEADRML 160
Score = 56.8 bits (131), Expect = 5e-07
Identities = 22/61 (36%), Positives = 43/61 (70%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F + L E+L++ + + G+E+ + IQ+ ++ + G+D+IAQA++GTGKTA F + +L +
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 227 I 229
+
Sbjct: 66 L 66
Score = 39.9 bits (89), Expect = 0.064
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF+D+I + + Q +L SAT P + +++ M+DP+RI + + I+Q +
Sbjct: 163 GFQDEIDAIIDQTNKQRQTLLFSATYPKKIATIAKRVMKDPLRIELDSQVHEESTIEQHF 222
Query: 693 IAIELEEWKL 722
+ E +L
Sbjct: 223 YKVTSESQRL 232
>UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=1; Pseudoalteromonas tunicata D2|Rep:
ATP-dependent RNA helicase, DEAD box family protein -
Pseudoalteromonas tunicata D2
Length = 416
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/86 (34%), Positives = 50/86 (58%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L L PTRELA Q+++ + G LN + + GG + + + + G +VV TP R+
Sbjct: 79 ALFLVPTRELAVQVEESIAKYGKGLNLRTISVFGGVRIPSQVNRFKRGADIVVATPRRLV 138
Query: 433 DMITRRALHANTIKLFVLDEADEMLS 510
D++ +A +K FV+DEAD ++S
Sbjct: 139 DLLKVKAFSLEQVKHFVMDEADRLVS 164
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F ++ L + L + + G++ P+ IQ+ +I + G D A A +GTGKTA + + LQ+
Sbjct: 4 FAELGLNKTLQANVLSLGYKSPTYIQEHSIGAVLSGTDTYAIAPTGTGKTAAYLLPTLQE 63
Query: 227 I 229
+
Sbjct: 64 L 64
>UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinekea
sp. MED297|Rep: ATP-dependent RNA helicase - Reinekea
sp. MED297
Length = 534
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL-ESGVHVVVGTPGRV 429
+LILAPTRELA QI + AL + K A +GG + + +QL E ++V TPGR+
Sbjct: 104 ALILAPTRELALQIAEDAKALTKYSRLKVAAVVGGMDFDKQKQQLHEQRTDILVATPGRL 163
Query: 430 YDMITRRALHANTIKLFVLDEADEML 507
D + R+A+ + I++ ++DEAD ML
Sbjct: 164 IDFMNRKAVFLDQIEMLIIDEADRML 189
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F D+ L L+R I G+E S IQ + + G D I +AQ+GTGKTA F I+ +
Sbjct: 29 FHDLFLPIALMRAIQEVGYEYCSPIQAMTLPYALAGHDCIGKAQTGTGKTAAFLITAITD 88
Query: 227 I 229
+
Sbjct: 89 L 89
Score = 37.9 bits (84), Expect = 0.26
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 564 QVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEE 713
Q +L SAT D+L +++ + DPVR+ V+ + T E ++Q + EE
Sbjct: 211 QTLLFSATFSQDILNLAQRWTNDPVRVEVEPKVKTAEDVEQHVYLVSSEE 260
>UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 577
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/86 (39%), Positives = 46/86 (53%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+L PTRELA Q++ L + + A GG + L G H VVGTPGRV
Sbjct: 108 ALVLVPTRELALQVEHEARTLFEGTGLRVAAVYGGVGYGKQNDALREGAHFVVGTPGRVL 167
Query: 433 DMITRRALHANTIKLFVLDEADEMLS 510
D + RR + + ++ DEAD MLS
Sbjct: 168 DHLLRRTMQLDRLRALTFDEADRMLS 193
Score = 37.9 bits (84), Expect = 0.26
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +2
Query: 98 GFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQID 232
G++ +Q A+ GRD++ Q+++G+GKT F + +L+++D
Sbjct: 56 GWQSLMPVQAHALPYLFDGRDLMVQSRTGSGKTGAFLLPLLERLD 100
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LILAPTREL QI + ++A+G L +GG + L HVVVG+PGRV
Sbjct: 122 ALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAKKPHVVVGSPGRVV 181
Query: 433 DMITR-RALHANTIKLFVLDEADEMLS 510
D + + + ++K+ VLDEAD +LS
Sbjct: 182 DHLQQTKGFSLKSVKVLVLDEADRLLS 208
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +2
Query: 35 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSIS 214
V TF + L EL + G++ P+AIQ + +QGRD+IA A++G+GKTA F +
Sbjct: 49 VSPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLP 108
Query: 215 ILQQI 229
ILQ++
Sbjct: 109 ILQRL 113
>UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 606
Score = 67.7 bits (158), Expect = 3e-10
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Frame = +1
Query: 250 SSLILAPTRELAQQIQKVVIALGDHLNAK--CHACIGGTNVREDIRQLES-GVHVVVGTP 420
S LIL+PTRELAQQI +V + L+ K + +GGTN+ DI+ L+S ++V TP
Sbjct: 141 SILILSPTRELAQQINEVAERMSTALSKKFGTRSVVGGTNMDRDIKNLKSKRADILVATP 200
Query: 421 GRVYDMITRRALHAN--TIKLFVLDEADEML 507
GR+ D++ + A +K+ VLDEAD +L
Sbjct: 201 GRLLDLMENGGIKARFAQLKMIVLDEADRLL 231
Score = 41.5 bits (93), Expect = 0.021
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 101 FEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQI 229
FE + +Q + T + G DV+AQA++GTGKT F + ++Q++
Sbjct: 87 FETCTEVQAATLPTILAGDDVLAQAKTGTGKTLAFLVPVVQRL 129
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 ILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 438
ILAPTRELAQQI++ +LG + + +GG N+ + R L H+++ TPGR+ D
Sbjct: 154 ILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDH 213
Query: 439 I-TRRALHANTIKLFVLDEADEML 507
+ + +K V+DEAD +L
Sbjct: 214 LENTKGFSLRKLKFLVMDEADRLL 237
Score = 63.7 bits (148), Expect = 5e-09
Identities = 28/71 (39%), Positives = 47/71 (66%)
Frame = +2
Query: 17 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKT 196
+T+ D+ E+F ++NL EL++ + KP+ IQ +AI ++G D+I AQ+G+GKT
Sbjct: 73 NTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKT 132
Query: 197 ATFSISILQQI 229
A F+I IL ++
Sbjct: 133 AAFAIPILNRL 143
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/85 (40%), Positives = 47/85 (55%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+LAPTRELAQQIQ+V G + GG +R L+ G +V+ TPGR+
Sbjct: 357 ALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLI 416
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D ++ + + VLDEAD ML
Sbjct: 417 DFLSAGSTNLKRCTYLVLDEADRML 441
Score = 37.1 bits (82), Expect = 0.45
Identities = 15/65 (23%), Positives = 38/65 (58%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
++ F +++L + +++ I G++ P+AIQ + + G + + A++G+GKT + +
Sbjct: 280 IQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPA 339
Query: 218 LQQID 232
+ I+
Sbjct: 340 IVHIN 344
Score = 33.9 bits (74), Expect = 4.2
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTL-EGIKQF 689
GF+ QI + + D Q ++ SAT P +V +++ F+ + ++I + EL+ I+Q
Sbjct: 444 GFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQV 503
Query: 690 YIAIE--LEEWKLETL 731
+ +E KL+TL
Sbjct: 504 VDVCDEFSKEEKLKTL 519
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 67.7 bits (158), Expect = 3e-10
Identities = 39/102 (38%), Positives = 53/102 (51%)
Frame = +1
Query: 202 FLYIDSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 381
F++I N + S + L+LAPTRELA QI + + G GG +R
Sbjct: 209 FMHIKRLQNNPR-SGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLR 267
Query: 382 QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
L+ GV VVV TPGR+ D++ R + + VLDEAD ML
Sbjct: 268 DLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRML 309
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKT 196
+ +F+ E+L+ I GF P+ IQ ++ +Q +DV+A A++G+GKT
Sbjct: 149 ITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKT 201
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/87 (39%), Positives = 49/87 (56%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LIL PTRELA Q V LG L+ K GGT+ + ++ + GV ++V T GR+
Sbjct: 93 ALILEPTRELAAQTAAVCRQLGRRLSLKTRVICGGTSREQQVQSVSDGVDIIVATHGRLL 152
Query: 433 DMITRRALHANTIKLFVLDEADEMLSE 513
D++ + L + VLDEAD +L E
Sbjct: 153 DLVMQADLVLEHLTYLVLDEADRLLDE 179
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/61 (37%), Positives = 41/61 (67%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+++ L LL + G ++PS IQ +AI ++G+DV+ +Q+G+GKTA F + +LQ+
Sbjct: 22 FEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGKTAAFVLPMLQK 81
Query: 227 I 229
+
Sbjct: 82 L 82
Score = 39.5 bits (88), Expect = 0.084
Identities = 19/56 (33%), Positives = 36/56 (64%)
Frame = +3
Query: 564 QVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETL 731
Q + SAT+P+ V+++++ R+PVR+ + E T + I+Q I +E ++ K ET+
Sbjct: 198 QTVFCSATLPEPVMDLAKRVTRNPVRVEIAAESFTPKNIRQRAIFVEKDD-KPETV 252
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,153,376
Number of Sequences: 1657284
Number of extensions: 17166933
Number of successful extensions: 50747
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 45842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49895
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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