Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30452
(738 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 143 1e-34
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 131 5e-31
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 98 6e-21
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 82 5e-16
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 5e-15
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 78 9e-15
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 75 5e-14
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 75 5e-14
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 68 9e-12
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 9e-12
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 6e-11
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 64 9e-11
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 60 1e-09
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 60 1e-09
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 58 7e-09
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 53 2e-07
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 52 5e-07
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 50 2e-06
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 48 1e-05
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 48 1e-05
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 46 2e-05
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 42 4e-04
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 42 5e-04
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 40 0.003
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 39 0.004
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.045
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 33 0.24
SB_2863| Best HMM Match : Asp (HMM E-Value=1.2e-07) 33 0.32
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 32 0.42
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 32 0.56
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 32 0.56
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 31 1.3
SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_25218| Best HMM Match : zf-AD (HMM E-Value=0.094) 29 3.0
SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07) 29 3.9
SB_39648| Best HMM Match : DUF1110 (HMM E-Value=1.7) 29 5.2
SB_19614| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_54333| Best HMM Match : Glyco_hydro_39 (HMM E-Value=0) 28 6.9
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 28 6.9
SB_26279| Best HMM Match : S-antigen (HMM E-Value=3) 28 9.1
SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08) 28 9.1
SB_17119| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 143 bits (347), Expect = 1e-34
Identities = 67/86 (77%), Positives = 76/86 (88%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+LAPTRELAQQIQKVV+ALGD+++ KCHACIGGTNVRED +LE GVHVVVGTPGRV+
Sbjct: 162 ALVLAPTRELAQQIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVF 221
Query: 433 DMITRRALHANTIKLFVLDEADEMLS 510
DMI R L+ IKLFVLDEADEMLS
Sbjct: 222 DMINRGVLNTRDIKLFVLDEADEMLS 247
Score = 118 bits (284), Expect = 5e-27
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 510 RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 689
RGFKDQI+DVF L VQV+LLSATMP DVLEV+ FMRD VRILV++EE+TLEGIKQF
Sbjct: 248 RGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVVRILVKREEVTLEGIKQF 307
Query: 690 YIAIELEEWKLETLCD 737
++ +E E+WKL+TLCD
Sbjct: 308 FVLVEKEDWKLDTLCD 323
Score = 112 bits (269), Expect = 3e-25
Identities = 62/102 (60%), Positives = 71/102 (69%), Gaps = 22/102 (21%)
Frame = +2
Query: 8 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQ------------ 151
G ++WD+VVE+FDDMNLKE LLRGIYAYGFEKPSAIQQRAI C Q
Sbjct: 52 GKRQSNWDEVVESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQL 111
Query: 152 ----------GRDVIAQAQSGTGKTATFSISILQQIDTSIRE 247
RDVIAQAQSGTGKTATF+ISILQ+IDT+ ++
Sbjct: 112 NLTKNHYVLSARDVIAQAQSGTGKTATFAISILQEIDTNYKD 153
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 131 bits (317), Expect = 5e-31
Identities = 58/87 (66%), Positives = 75/87 (86%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+L+PTRELA QIQKVV+ALGD+++ +CHACIGGTN+ EDIR+L+ G H+V GTPGRV+
Sbjct: 68 ALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRVF 127
Query: 433 DMITRRALHANTIKLFVLDEADEMLSE 513
DMI RR L +IK+ VLDEADEML++
Sbjct: 128 DMIRRRNLRTRSIKMLVLDEADEMLNK 154
Score = 110 bits (264), Expect = 1e-24
Identities = 46/76 (60%), Positives = 65/76 (85%)
Frame = +3
Query: 510 RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 689
+GFK+QI+DV++ L QV+LLSAT+P ++LE++ FM DP+RILV+++ELTLEGIKQF
Sbjct: 154 KGFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQF 213
Query: 690 YIAIELEEWKLETLCD 737
++A+E EEWK +TLCD
Sbjct: 214 FVAVEREEWKFDTLCD 229
Score = 87.8 bits (208), Expect = 8e-18
Identities = 44/68 (64%), Positives = 51/68 (75%)
Frame = +2
Query: 98 GFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQV*SWLPQE 277
GFEKPSAIQQRAI ++GRDVIAQAQSGTGKTATFSIS+LQ IDT +RE Q P
Sbjct: 16 GFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTR 75
Query: 278 SWPNKFRR 301
N+ ++
Sbjct: 76 ELANQIQK 83
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 98.3 bits (234), Expect = 6e-21
Identities = 41/60 (68%), Positives = 54/60 (90%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L+L+PTRELA QIQKVV+ALGD+++ +CHACIGGTN+ EDIR+L+ G H+V GTPGRV+
Sbjct: 6 ALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRVF 65
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 81.8 bits (193), Expect = 5e-16
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Frame = +1
Query: 190 KNCYFLYIDSTTNRYKHS*MSSLILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 366
K C F I + + + +IL PTRE+A Q++ V+ A+G H + C IGG ++
Sbjct: 63 KTCVFSVIALENVITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISL 122
Query: 367 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSE 513
ED + L+S H+ VGTPGRV +I ++ L ++++F+LDEAD++L E
Sbjct: 123 EEDKKALKS-CHIAVGTPGRVKYLIEQKYLKTESVRMFILDEADKLLDE 170
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/70 (47%), Positives = 42/70 (60%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F + L LLRG+ GFEKPS IQ +AI G D+IAQA+SGTGKT FS+ L+
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALEN 74
Query: 227 IDTSIRECQV 256
+ T Q+
Sbjct: 75 VITESNCIQI 84
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 78.6 bits (185), Expect = 5e-15
Identities = 38/85 (44%), Positives = 51/85 (60%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+L +APTRELA+QI DH K C GG +V QLE G H +VGTPGR+
Sbjct: 555 ALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSVPYQASQLERGCHFLVGTPGRLQ 614
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D ++R ++ +I+ +LDEAD ML
Sbjct: 615 DFVSREKIYLGSIQHLILDEADRML 639
Score = 51.2 bits (117), Expect = 9e-07
Identities = 20/64 (31%), Positives = 42/64 (65%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+ +F+++ E+L+ I G+ +P+ +Q+ A+ + GRD++A AQ+G+GKTA + + +
Sbjct: 478 ITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPV 537
Query: 218 LQQI 229
L +
Sbjct: 538 LTSL 541
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 77.8 bits (183), Expect = 9e-15
Identities = 37/84 (44%), Positives = 49/84 (58%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L+L PTRELAQQ+Q+V ++G H + GG IR+LE GV + + TPGR+ D
Sbjct: 136 LVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIATPGRLID 195
Query: 436 MITRRALHANTIKLFVLDEADEML 507
M+ R + VLDEAD ML
Sbjct: 196 MLESRKTNLRRCTYLVLDEADRML 219
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELT 668
GF+ QI + + D Q ++ SAT P +V ++ F+ D V I V LT
Sbjct: 222 GFEPQIRTIIDQIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHITVGSLGLT 273
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 76.2 bits (179), Expect = 3e-14
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +1
Query: 325 LNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRAL 456
++ KCHACIGGTNVRED +LE GVHVVVGTPGRV+DMI R L
Sbjct: 1 MHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINRGVL 44
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 75.4 bits (177), Expect = 5e-14
Identities = 37/95 (38%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG-------VHV 405
+ +L+L PTRELA Q ++ I LG H+ A+ GGT++++DI +L + VHV
Sbjct: 116 IQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHV 175
Query: 406 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 510
+V TPGRV D++ ++ + ++ V+DEAD++LS
Sbjct: 176 IVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLS 210
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/64 (48%), Positives = 48/64 (75%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+D LK ELL GI+ GF+KPS IQ+ +I + GRD++A+A++GTGKTA + + +L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 227 IDTS 238
DT+
Sbjct: 109 TDTT 112
Score = 44.8 bits (101), Expect = 7e-05
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +3
Query: 516 FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYI 695
FK + + K L + Q++L SAT P V + +R P I + +ELTL G+ Q+Y
Sbjct: 213 FKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINLM-DELTLHGVTQYYA 271
Query: 696 AIELEEWKLETL 731
+E E+ K+ L
Sbjct: 272 FVE-EKQKVHCL 282
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 75.4 bits (177), Expect = 5e-14
Identities = 37/95 (38%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG-------VHV 405
+ +L+L PTRELA Q ++ I LG H+ A+ GGT++++DI +L + VHV
Sbjct: 116 IQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHV 175
Query: 406 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 510
+V TPGRV D++ ++ + ++ V+DEAD++LS
Sbjct: 176 IVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLS 210
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/64 (48%), Positives = 48/64 (75%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+D LK ELL GI+ GF+KPS IQ+ +I + GRD++A+A++GTGKTA + + +L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 227 IDTS 238
DT+
Sbjct: 109 TDTT 112
Score = 44.8 bits (101), Expect = 7e-05
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +3
Query: 516 FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYI 695
FK + + K L + Q++L SAT P V + +R P I + +ELTL G+ Q+Y
Sbjct: 213 FKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINLM-DELTLHGVTQYYA 271
Query: 696 AIELEEWKLETL 731
+E E+ K+ L
Sbjct: 272 FVE-EKQKVHCL 282
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 67.7 bits (158), Expect = 9e-12
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LIL PTRELA QI + ALG + KC +GG ++ L H+++ TPGR+
Sbjct: 35 ALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLI 94
Query: 433 DMI-TRRALHANTIKLFVLDEADEMLS 510
D + + T+K V+DEAD +L+
Sbjct: 95 DHLENTKGFSLRTLKYLVMDEADRILN 121
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 155 RDVIAQAQSGTGKTATFSISILQQI 229
+DVI A++G+GKT F++ ILQ +
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQAL 26
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 67.7 bits (158), Expect = 9e-12
Identities = 33/85 (38%), Positives = 49/85 (57%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
++ +APTRELA QI + C GG +V +RQL+SG +++VGTPGR+
Sbjct: 791 AMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVSHQLRQLQSGCNLLVGTPGRLT 850
Query: 433 DMITRRALHANTIKLFVLDEADEML 507
D I + + ++ +LDEAD ML
Sbjct: 851 DFIEKGKVSLKGLQFLILDEADRML 875
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+ +F++ NL E L + ++KP+ +Q+ +I I GRDV+A AQ+G+GKTA F + +
Sbjct: 710 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKTAAFLLPV 769
Query: 218 L 220
+
Sbjct: 770 M 770
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 64.9 bits (151), Expect = 6e-11
Identities = 34/83 (40%), Positives = 43/83 (51%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
LI APTREL QQI G N A GG N E + L+ G +VV TPGR+ D
Sbjct: 594 LICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLID 653
Query: 436 MITRRALHANTIKLFVLDEADEM 504
+ +A + + + V DEAD M
Sbjct: 654 HVKAKATNLHRVTYLVFDEADRM 676
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATF 205
+F E+++ I + +P+ IQ +A+ + GRD+I A++G+GKTA F
Sbjct: 518 SFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAF 571
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 64.5 bits (150), Expect = 9e-11
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
M ++++ PTRELA QI + N +C GGT + E I +L+ G ++V TPGR
Sbjct: 145 MIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTPGR 204
Query: 427 VYDMITR---RALHANTIKLFVLDEADEM 504
+ DM+T R + VLDEAD M
Sbjct: 205 MIDMLTANNGRVTNCQRCTYLVLDEADRM 233
Score = 32.3 bits (70), Expect = 0.42
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTA 199
V+T+ ++ ++L + +EKP+ IQ +AI + GRD+IA + T + A
Sbjct: 104 VKTWAQTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELA 157
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 64.5 bits (150), Expect = 9e-11
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F D LK ELLR I GFE PS +Q I I G D+I QA+SG GKTA F ++ LQQ
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 227 ID 232
++
Sbjct: 109 LE 110
Score = 63.7 bits (148), Expect = 1e-10
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV-HVVVGTP 420
+S L++ TRELA QI K ++ N K GG N+++D + L++ H+VVGTP
Sbjct: 116 VSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTP 175
Query: 421 GRVYDMITRRALHANTIKLFVLDEADEMLSEVXXXXXXXXXXCCQL 558
GR+ + + L+ K F+LDE D+ML ++ C++
Sbjct: 176 GRILALTREKTLNLKHAKHFILDECDKMLEQLDLLLSARSVVICKI 221
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 64.5 bits (150), Expect = 9e-11
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F D LK ELLR I GFE PS +Q I I G D+I QA+SG GKTA F ++ LQQ
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 227 ID 232
++
Sbjct: 109 LE 110
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV-HVVVGTP 420
+S L++ TRELA QI K ++ N K GG N+++D + L++ H+VVGTP
Sbjct: 116 VSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTP 175
Query: 421 GRVYDMITRRALHANTIKLFVLDEADEMLSEV 516
GR+ + + L+ K F+LDE D+ML ++
Sbjct: 176 GRILALTREKTLNLKHAKHFILDECDKMLEQL 207
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/84 (39%), Positives = 46/84 (54%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
L++APTRELA+Q+ L +L C GG + SG+ V+VGTPGR+ D
Sbjct: 151 LVMAPTRELAKQVGNEFENLKSNLEVYC--IYGGMPYEPQENAINSGLDVLVGTPGRILD 208
Query: 436 MITRRALHANTIKLFVLDEADEML 507
+ + L + +K VLDE D ML
Sbjct: 209 FMRQGTLDLSKLKHVVLDEVDRML 232
Score = 35.1 bits (77), Expect = 0.060
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F + ++ + + G IQ G DVI QA++GTGKT +F++ ++++
Sbjct: 75 FSKFRISQKTIDNLEDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEK 134
Query: 227 I 229
+
Sbjct: 135 L 135
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/77 (36%), Positives = 49/77 (63%)
Frame = +3
Query: 507 VRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 686
++G +DQ + K L D QV+L SAT +DV++ + + +P+ I +++EE +L+ IKQ
Sbjct: 261 LQGHQDQSIRIHKSLHKDCQVLLFSATYDEDVMKFAETVVPNPIIIRLRREEESLDNIKQ 320
Query: 687 FYIAIELEEWKLETLCD 737
+Y+ + E K E LC+
Sbjct: 321 YYVVCKNSEDKFEALCN 337
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Frame = +2
Query: 41 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDV--IAQAQSGTGKTATFSIS 214
++F+++ L L RG+Y GF KPS IQ+ A+ + V IAQ+QSGTGKTA F ++
Sbjct: 103 KSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVLT 162
Query: 215 ILQQIDTS 238
+L ++D +
Sbjct: 163 MLSRVDAT 170
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+ L+PT ELA+Q KV A+G H + K + + G R + H+++GTPG +
Sbjct: 177 ICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFP---RGQKCTDHIIIGTPGTLL 233
Query: 433 DMITR-RALHANTIKLFVLDEADEMLS 510
D I + + + +FVLDEAD M++
Sbjct: 234 DWIRKSKCFEPRKVSVFVLDEADIMIA 260
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 58.0 bits (134), Expect = 7e-09
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+++L PTRELA QI LG + K +GG ++ + L + HVV+ TPGR+
Sbjct: 78 AVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATPGRLA 137
Query: 433 DMI-TRRALHANTIKLFVLDEADEML 507
D I + L+ I+ VLDEAD +L
Sbjct: 138 DHIKSTDTLNLKKIQFLVLDEADRLL 163
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = +2
Query: 44 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
+F + L + L+ A G +KP+ IQ + +QGRD I A++G+GKTA F++ ILQ
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67
Query: 224 QI 229
++
Sbjct: 68 KL 69
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 55.6 bits (128), Expect = 4e-08
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = +1
Query: 337 CHACI--GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
C C+ GG ++ +R+L+ H++V TPGR+ DM+ R + ++I+ VLDEAD ML
Sbjct: 954 CRPCVVYGGADIGSQLRELDRNCHLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRML 1012
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQ 226
F+D++L E LL + G++KP+ +Q+ AI RD++A AQ+G+GKTA F I IL +
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPILSR 936
Query: 227 I 229
I
Sbjct: 937 I 937
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 55.6 bits (128), Expect = 4e-08
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 435
+I++PTREL+ Q V L H N +GG N + + +L+ GV++++ TPGR+ D
Sbjct: 648 IIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNLLIATPGRLLD 707
Query: 436 MI--TRRALHANTIKLFVLDEADEML 507
+ T+ L+ N ++ V+DEAD +L
Sbjct: 708 HLQNTQGFLYKN-LQCLVIDEADRIL 732
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/55 (32%), Positives = 36/55 (65%)
Frame = +2
Query: 59 NLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
++ E+ L+GI GF + IQ ++I ++GRD++ A++G+GKT F + +++
Sbjct: 578 DVSEKTLQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVE 632
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/70 (30%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM-RDPVRILV--QKEELTLEGIK 683
GF++++ + ++L + Q +L SAT +V ++++ + R P+ + V KE T+EG++
Sbjct: 735 GFEEEMRQIIRILPSKRQTVLFSATQTKNVEDLAKLSLKRSPLYVGVDDHKETSTVEGLE 794
Query: 684 QFYIAIELEE 713
Q YI + E+
Sbjct: 795 QGYIVVPSEK 804
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
VE F D + + L G+ GF P+ IQ++ I + GRDV+ A++G+GKT F I I
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 218 LQQI 229
++ +
Sbjct: 109 IETL 112
Score = 51.6 bits (118), Expect = 6e-07
Identities = 27/88 (30%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 426
+ +L+++PTRELA Q +V++ +G+ + IGG +++ + +++ ++VV TPGR
Sbjct: 123 LGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRIMK-TNIVVCTPGR 181
Query: 427 VYD-MITRRALHANTIKLFVLDEADEML 507
+ M ++++ VLDEAD +L
Sbjct: 182 LLQHMDETPNFDCTSLQILVLDEADRIL 209
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/71 (32%), Positives = 42/71 (59%)
Frame = +2
Query: 23 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTAT 202
D + +E+F D+NL EL + F+ P+ IQ +++ + GRD+I A++G+GKT
Sbjct: 66 DCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLA 125
Query: 203 FSISILQQIDT 235
+S+ + + T
Sbjct: 126 YSLPLCMLLRT 136
Score = 31.9 bits (69), Expect = 0.56
Identities = 22/58 (37%), Positives = 25/58 (43%)
Frame = +1
Query: 334 KCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
K A GG V L G VVV TPGR+ D+ I V+DE D ML
Sbjct: 197 KAVAVCGGVPVSTQTIALREGADVVVATPGRLLDLY--------KITYLVMDEPDRML 246
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/73 (32%), Positives = 43/73 (58%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LI+APTRELA Q++ ++ + + K A +GG + R L+ +VV TPGR++
Sbjct: 221 ALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRLW 280
Query: 433 DMITRRALHANTI 471
++I++ H +
Sbjct: 281 ELISQVFTHGKPL 293
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCI-QGRDVIAQAQSGTGKTATFSISILQ 223
++ + + ++LR + GF KP+ IQ +I + RD+I A++G+GKT F I I+Q
Sbjct: 132 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQ 191
Query: 224 QID 232
I+
Sbjct: 192 HIE 194
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = +2
Query: 29 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFS 208
D+V+ +D ++ + E R + GF P+ IQ I + G+DV A A +GTGKTA F
Sbjct: 7 DEVLNAYDSLDEEAED-RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFM 65
Query: 209 ISILQQI 229
+ IL+++
Sbjct: 66 LPILERL 72
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/61 (32%), Positives = 39/61 (63%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISI 217
+ + + + + +L + G++ P+ IQ++AI +Q RD+I A++G+GKTA F+I +
Sbjct: 100 IRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPL 159
Query: 218 L 220
L
Sbjct: 160 L 160
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 363
+LILAPTRELAQQI++ ++ G L + + IGG +
Sbjct: 181 ALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGAD 217
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +2
Query: 38 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKT 196
+ +F++ NL E L + ++KP+ +Q+ +I I GRDV+A AQ+G+GKT
Sbjct: 133 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKT 185
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/82 (35%), Positives = 40/82 (48%)
Frame = +1
Query: 259 ILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 438
I+ P RELA QI K +L H + IGG + LES V ++V TPG +
Sbjct: 460 IVVPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPVDLLVATPGTLLKY 519
Query: 439 ITRRALHANTIKLFVLDEADEM 504
+ L + + V+DEAD M
Sbjct: 520 RQKDRLFFSDLTHLVIDEADTM 541
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = +2
Query: 17 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKT 196
D + Q V +F + L++++L+ + A +P+ IQ I I VI AQ+G+GKT
Sbjct: 370 DMAFRQRVYSFAGLGLRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKT 429
Query: 197 ATFSISILQQI 229
+ ++ ++
Sbjct: 430 LAYLAPLVHRL 440
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/82 (35%), Positives = 40/82 (48%)
Frame = +1
Query: 253 SLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 432
+LIL+PTRELA Q QK + LG K +GG + VV TPGR
Sbjct: 354 ALILSPTRELALQTQKFIKELGRFTGLKSSVILGGDS--------------VVATPGRFL 399
Query: 433 DMITRRALHANTIKLFVLDEAD 498
++ L ++++ V DEAD
Sbjct: 400 HVVMEMELKLSSVEYVVFDEAD 421
Score = 35.1 bits (77), Expect = 0.060
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +2
Query: 146 IQGRDVIAQAQSGTGKTATFSISILQQIDT 235
+ G+DV+A A++G+GKTA F I + +++ T
Sbjct: 316 MDGKDVVAMARTGSGKTAAFLIPMFEKLQT 345
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +1
Query: 397 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSE 513
V +V GTPG++ D IT + + +K F+LDEAD +L++
Sbjct: 136 VDIVTGTPGKLNDFITTDKISLHQVKFFILDEADGLLAQ 174
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Frame = +1
Query: 253 SLILAPTRELAQQ-IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH---VVVGTP 420
++I+ PTRELA Q + +V LGD + + + G ++ + L+ +H +V+GTP
Sbjct: 228 TIIVVPTRELASQMLYEVSRLLGD--KSIVASFVSGVDLSRQEKLLKDSLHPPRIVIGTP 285
Query: 421 GRVYDMITRRALHANTIKLFVLDEADEMLSEV 516
R+++++ K V+DE D+ L V
Sbjct: 286 KRLWEIVQEHEHLFQRTKRIVIDEVDKTLLPV 317
Score = 35.1 bits (77), Expect = 0.060
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQ 223
F + + +L+ + G KP IQ++A+ + + ++ ++++GTGK+ F + +Q
Sbjct: 162 FSNFGVHPKLVEKLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSVQ 220
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +1
Query: 235 KHS*MSSLILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG--VHVV 408
K S +++++PTRELAQQI + L + H + N + +S ++
Sbjct: 202 KKSGFRAVVVSPTRELAQQIYREFCHLAKGCAFRIHV-LTKANASTNTFGAKSSKRFDIL 260
Query: 409 VGTPGRVYDMITRR--ALHANTIKLFVLDEADEMLSE 513
V TP R+ ++T+ + + ++ +LDEAD++ E
Sbjct: 261 VTTPNRLVHLLTQEPPGIELHNVEWLILDEADKLFEE 297
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +1
Query: 388 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 507
E GV V+V TPGR+ ++I+R+A+ + V+DE D ML
Sbjct: 253 EMGVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTML 292
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 692
GF+ Q+ + + LS Q +L SAT+P + ++ + PV I L + +KQ
Sbjct: 295 GFEQQVQQILERLSNRRQTMLFSATIPPSIEAMASRLLNAPVFISAGSPSLPTKAVKQLI 354
Query: 693 IAIE 704
+ +E
Sbjct: 355 LWVE 358
Score = 36.3 bits (80), Expect = 0.026
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 47 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGK 193
F + E L + + +G+ P+ IQ + + + GRDV+ A +G+GK
Sbjct: 198 FFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGK 246
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 35.5 bits (78), Expect = 0.045
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 650
GF+ +I + + D Q ++ SAT P V ++ +M DPVR+ V
Sbjct: 2 GFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFV 47
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELT 668
GF+ I+ + L + L SAT D+V + R +R+PVR+ V +E+LT
Sbjct: 2 GFEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTV-REKLT 52
>SB_2863| Best HMM Match : Asp (HMM E-Value=1.2e-07)
Length = 721
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -3
Query: 460 HEAHDELSYHIHDLECPP---PHEHHSPVGEYLHGHWC 356
HE ++Y H+ CP PHEH P+ H H C
Sbjct: 657 HENMGPMNYLSHEHMCPMNNVPHEHMGPINNVSHEHMC 694
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 98 GFEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQIDTS 238
G P+++Q+ + ++GRDV A G+GK + + I+ QI S
Sbjct: 206 GVTVPTSLQKHMWPSLLRGRDVAGVAIEGSGKRLAYLLPIIHQITES 252
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 31.9 bits (69), Expect = 0.56
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 650
GF++ + +F + Q +L SATMP + ++ + PV + V
Sbjct: 32 GFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNV 77
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 31.9 bits (69), Expect = 0.56
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 650
GF++ + +F + Q +L SATMP + ++ + PV + V
Sbjct: 32 GFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNV 77
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 513 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 686
GF I V L A Q +L SAT DD+ ++ + +P+ I V + + + Q
Sbjct: 19 GFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVLQ 76
>SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 27
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 376 IRQLESGVHVVVGTPGRVYDMIT 444
I +L+ G ++V TPGR+ DM+T
Sbjct: 1 IAELKRGAEIIVCTPGRMIDMLT 23
>SB_25218| Best HMM Match : zf-AD (HMM E-Value=0.094)
Length = 436
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 689 KLFNTFQGKLFLLYKYAYRISHKASRYFQYIIRHG 585
+L T GK FLL Y YR S K + +F + R G
Sbjct: 387 RLMETQSGKHFLLIVYIYRESRKVTVHFGHDYRKG 421
>SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07)
Length = 532
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +2
Query: 116 AIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 247
+++ ++ + G DV+A + SGT K + F ++++ D+ R+
Sbjct: 235 SMEDENVVFGVNGSDVVANSSSGTVKRSLFLPEVMEENDSVFRD 278
>SB_39648| Best HMM Match : DUF1110 (HMM E-Value=1.7)
Length = 472
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 391 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSEV 516
S V ++ G PG V I + +NT + + D D M S +
Sbjct: 376 SSVDIIDGNPGHVMSTIATDDVTSNTDDIMIEDNPDNMTSNI 417
>SB_19614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 28.7 bits (61), Expect = 5.2
Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Frame = -3
Query: 469 WCWHEAHDELS--YHIHDLECPPPHEHHSPVG-EYLHGHWCHQCKHGI*HSSDHQELSPP 299
W WH +S HI CP P HHS G + + + HQ PP
Sbjct: 453 WLWHTWKKYISPRSHIERHYCPSPCHHHSNGGISEVFEPKPPSYNEAVSQPNTHQTQPPP 512
Query: 298 SEFVGPALLWEPGSNLTFT 242
S A+ PG ++T T
Sbjct: 513 SYEEAVAI---PGDHVTVT 528
>SB_54333| Best HMM Match : Glyco_hydro_39 (HMM E-Value=0)
Length = 1325
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 376 IRQLESGVHVVVGTPGRVYDMITRRALHA 462
+RQ+ + V TP VYDM TR+ HA
Sbjct: 1129 VRQVNTTAIPRVSTPRHVYDMQTRQLFHA 1157
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 454 LHANTIKLFVLDEADEMLSE 513
L +IK+ VLDEADEML++
Sbjct: 31 LDTRSIKMLVLDEADEMLNK 50
>SB_26279| Best HMM Match : S-antigen (HMM E-Value=3)
Length = 613
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 457 EAHDELSYHIHDLECPPPHEHHSPVGEYLHGHWC 356
E H L++H H +CP E+H+ + + H C
Sbjct: 89 EYHAMLTFHTHFTQCPDFSEYHAMLPFHTHFTQC 122
>SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08)
Length = 829
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 94 GVYASQQFFFEVHVIEGFDNLIPVGVKC 11
GVY F H + GF N IP +C
Sbjct: 742 GVYLESNVFQNGHALVGFQNTIPASQEC 769
>SB_17119| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 101 FEKPSAIQQRAIMTCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ 253
F + AI+ + +C+ R + G G + +I+IL + S RE Q
Sbjct: 147 FLEQQAIRDKLTFSCVDDRSKLKLYDEGAGLSLDKTITILSMKEASSRELQ 197
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,827,079
Number of Sequences: 59808
Number of extensions: 567921
Number of successful extensions: 1600
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1564
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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