Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30451
(628 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0954 - 12687373-12687582,12688885-12689067,12689160-126892... 107 9e-24
07_03_1667 + 28484069-28484071,28484151-28484240,28484339-284844... 104 5e-23
05_01_0401 + 3169979-3169981,3170071-3170160,3170556-3170684,317... 104 7e-23
04_03_0263 - 13605195-13607366,13607535-13607702 31 0.75
01_06_0579 + 30379243-30379617 29 2.3
06_01_1101 - 9044679-9045320,9045484-9045890,9046020-9046274,904... 29 3.0
02_03_0371 - 18267986-18268378 29 3.0
05_05_0034 - 21741148-21741275,21741890-21741928,21742007-217421... 29 4.0
02_05_0534 + 29819323-29819900,29820122-29820202,29821007-298210... 29 4.0
10_08_0461 - 18113348-18113389,18113683-18114231 28 5.3
11_01_0572 + 4565353-4565535,4566856-4567095,4567922-4568086,456... 28 7.0
10_08_0038 - 14336633-14336864,14336970-14337187,14337302-14339020 28 7.0
05_05_0030 - 21698625-21698752,21699589-21699627,21699708-216998... 28 7.0
05_02_0103 - 6628740-6628748,6629150-6629374 28 7.0
04_04_1385 - 33157557-33157655,33157752-33158201,33158864-331590... 27 9.2
03_06_0675 + 35455968-35455970,35456314-35456379,35456513-354565... 27 9.2
02_05_0718 + 31203358-31203717,31203826-31204011 27 9.2
01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,403... 27 9.2
>03_02_0954 -
12687373-12687582,12688885-12689067,12689160-12689288,
12689375-12689464,12689548-12689550
Length = 204
Score = 107 bits (256), Expect = 9e-24
Identities = 52/90 (57%), Positives = 69/90 (76%)
Frame = -1
Query: 526 LEVTCKLYRYLARRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVG 347
L++ KLYR+L RRT + FN ++LRRLFMS+ NRPP+S+ RL R M+ +E IAV+VG
Sbjct: 26 LKLIVKLYRFLVRRTKSPFNAVILRRLFMSKTNRPPLSLRRLVRFME--GKENQIAVIVG 83
Query: 346 TVTNDVRLYKIPKMTVAALHVTEKARARIL 257
TVT+D R+Y++P M VAAL TE ARARI+
Sbjct: 84 TVTDDKRVYEVPAMKVAALRFTETARARIV 113
Score = 82.6 bits (195), Expect = 2e-16
Identities = 47/84 (55%), Positives = 55/84 (65%), Gaps = 19/84 (22%)
Frame = -3
Query: 251 GGEILTFDQLALRAPTGKKT-----------------VLVQGQRNAREAVRHFGPAPGAP 123
GGE LTFDQLALRAP G+ T VL++G +NAREAV+HFGPAPG P
Sbjct: 116 GGECLTFDQLALRAPLGQNTYIAMPEILTIDNFALLQVLLRGPKNAREAVKHFGPAPGVP 175
Query: 122 RSHTKPYVRTKGH--EKARPSRRA 57
S+TKPYVR+KG EKAR R +
Sbjct: 176 HSNTKPYVRSKGRKFEKARGRRNS 199
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -2
Query: 594 GID-INHKHDRKVRRTEVKSQDIYLRLLV 511
GID + ++K +RT KS D+YL+L+V
Sbjct: 2 GIDLVAGGRNKKTKRTAPKSDDVYLKLIV 30
>07_03_1667 +
28484069-28484071,28484151-28484240,28484339-28484491,
28484575-28484757,28486137-28486295
Length = 195
Score = 104 bits (250), Expect = 5e-23
Identities = 53/96 (55%), Positives = 70/96 (72%), Gaps = 6/96 (6%)
Frame = -1
Query: 526 LEVTCKLYRYLARRTNAKFNQIVLRRLFMSRINRPPISVSRLARHM--KKPTREGL---- 365
L++ KLYR+L RRT + FN ++L+RLFMS+ NRPP+S+ RL R M K P R +
Sbjct: 26 LKLIVKLYRFLVRRTKSHFNAVILKRLFMSKTNRPPLSMRRLVRFMEGKVPDRHAISGDQ 85
Query: 364 IAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARIL 257
IAV+VGTVT+D R+Y++P M VAAL TE ARARI+
Sbjct: 86 IAVIVGTVTDDKRIYEVPAMKVAALRFTETARARII 121
Score = 101 bits (242), Expect = 5e-22
Identities = 48/68 (70%), Positives = 56/68 (82%), Gaps = 2/68 (2%)
Frame = -3
Query: 254 AGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--E 81
AGGE LTFDQLALRAP G+ TVL++G +NAREAV+HFGPAPG P S+TKPYVR+KG E
Sbjct: 123 AGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSNTKPYVRSKGRKFE 182
Query: 80 KARPSRRA 57
KAR R +
Sbjct: 183 KARGRRNS 190
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -2
Query: 594 GID-INHKHDRKVRRTEVKSQDIYLRLLV 511
GID + ++K +RT +S+D+YL+L+V
Sbjct: 2 GIDLVAGGRNKKTKRTAPRSEDVYLKLIV 30
>05_01_0401 +
3169979-3169981,3170071-3170160,3170556-3170684,
3170814-3170999,3172001-3172159
Length = 188
Score = 104 bits (249), Expect = 7e-23
Identities = 51/90 (56%), Positives = 68/90 (75%)
Frame = -1
Query: 526 LEVTCKLYRYLARRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVG 347
L++ KLYR+L RRT + FN ++L+RLFMS+ NRPP+S+ RLA+ M + E IAV+VG
Sbjct: 26 LKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLSLRRLAKFM-EGKEENNIAVIVG 84
Query: 346 TVTNDVRLYKIPKMTVAALHVTEKARARIL 257
TVT+D R+ +IPKM V AL TE ARARI+
Sbjct: 85 TVTDDKRIQEIPKMKVTALRFTETARARIV 114
Score = 102 bits (244), Expect = 3e-22
Identities = 49/68 (72%), Positives = 55/68 (80%), Gaps = 2/68 (2%)
Frame = -3
Query: 254 AGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--E 81
AGGE LTFDQLALRAP G+ TVL++G +NAREAVRHFG APG P SHTKPYVR+KG E
Sbjct: 116 AGGECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFE 175
Query: 80 KARPSRRA 57
KAR R +
Sbjct: 176 KARGRRNS 183
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -2
Query: 594 GID-INHKHDRKVRRTEVKSQDIYLRLLV 511
GID + ++K +RT +S D+YL+LLV
Sbjct: 2 GIDLVAGGRNKKTKRTAPRSDDVYLKLLV 30
>04_03_0263 - 13605195-13607366,13607535-13607702
Length = 779
Score = 31.1 bits (67), Expect = 0.75
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 470 EFGICTSGQVSVKFTSNLK*IS*DLTSVRRTFLSCL*LMSIPSCRIRHQE 619
E+GICTSGQ F SN L R+T L C + + I++ +
Sbjct: 269 EYGICTSGQCICPFQSNSSSRYFQLVDERKTNLGCAPVTPVSCQEIKNHQ 318
>01_06_0579 + 30379243-30379617
Length = 124
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 319 CTVSRHL*LSPLPRQSNPHELASS 390
CT+S H SP+ R S+PH LASS
Sbjct: 11 CTISCH---SPMRRSSSPHRLASS 31
>06_01_1101 -
9044679-9045320,9045484-9045890,9046020-9046274,
9046375-9046498,9047237-9047289,9047388-9047648,
9047795-9047848,9047975-9048458,9048554-9048592
Length = 772
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 348 PTTTAIKPSRVGFFMWR-AKRDTEIGGRLIRLIKSR 452
P TTA KP RV F + + K D E+ G L L+++R
Sbjct: 676 PNTTAPKPKRVRFALPKDTKIDREVRGELQELMEAR 711
>02_03_0371 - 18267986-18268378
Length = 130
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 609 RIRHEGIDINHKHDRKVRRTEVKSQDI 529
R R G+++NH+ D ++R E +QD+
Sbjct: 40 RRREHGVEVNHRGDEEIRVPEGPNQDV 66
>05_05_0034 - 21741148-21741275,21741890-21741928,21742007-21742121,
21742227-21742292,21743213-21743371,21743573-21743609,
21743757-21744194,21744735-21744817,21744920-21744956,
21745146-21745214,21745316-21745407,21745481-21745565,
21745903-21745982,21746327-21746724,21746813-21747717,
21747825-21747915,21748617-21750680,21750681-21750749,
21750850-21751273,21751644-21751763
Length = 1832
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/81 (24%), Positives = 35/81 (43%)
Frame = -3
Query: 314 TEDDGGCSSCYRKSSCTHFGAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPA 135
T+ C++C +S C HF + +LAL +P K+ V + Q + +
Sbjct: 1482 TKSKPNCNACPMRSECKHFASA---FASARLALPSPQDKRLVNMSNQFDFQNGT------ 1532
Query: 134 PGAPRSHTKPYVRTKGHEKAR 72
P H+ P ++ +G AR
Sbjct: 1533 --MPTPHSTPLLQLEGSIHAR 1551
>02_05_0534 +
29819323-29819900,29820122-29820202,29821007-29821027,
29821310-29821366,29822028-29822147,29822278-29822494
Length = 357
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 285 LPKKLVHAFWRWRRNSYF*SAGSSCSDWQEDS 190
+P KL+H W R+N Y SC+ WQ S
Sbjct: 300 IPVKLIHLSWLTRKNIYGVFVSESCA-WQHAS 330
>10_08_0461 - 18113348-18113389,18113683-18114231
Length = 196
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = -3
Query: 353 SGDSHK*RETVQDTEDDGGC-SSCYRKSSCTHFGAGGEILTFDQLALRAPTGKKTVLVQG 177
SG S V D + GC C + GG + +++L L A G+ V+
Sbjct: 118 SGRSSVVARVVDDCDSVNGCREEDGFAPPCRNNAVGGSPVVWEKLGLNASVGEFEVVWSC 177
Query: 176 QRNAREAVR 150
+NA+E +R
Sbjct: 178 LKNAKETLR 186
>11_01_0572 +
4565353-4565535,4566856-4567095,4567922-4568086,
4568612-4568887
Length = 287
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -1
Query: 238 LLLISWLFVLRLARRQYWYKVSEML 164
LL+++WLFV+ RR W +V E+L
Sbjct: 143 LLVLAWLFVIDFGRR-VWGEVDELL 166
>10_08_0038 - 14336633-14336864,14336970-14337187,14337302-14339020
Length = 722
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = -3
Query: 263 HFGAGGEI-LTFDQL-ALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTK 90
H GAGG+ FD + AL P ++ G+ N ++ H G S + + T+
Sbjct: 185 HVGAGGDQNKVFDNIGALGMPAAQQAPPSTGKVNHYQSSDHLGNNYHHDESSVRQLLHTR 244
Query: 89 GHEKARPSR 63
G RP R
Sbjct: 245 GRLCTRPGR 253
>05_05_0030 - 21698625-21698752,21699589-21699627,21699708-21699822,
21699927-21699992,21701064-21701203,21701424-21701473,
21701608-21702045,21702757-21702839,21702941-21702977,
21703366-21703457,21703531-21703615,21703950-21704029,
21704049-21704105,21704350-21704747,21706322-21707223,
21707331-21707421,21708123-21710273,21710375-21710813,
21711180-21711299
Length = 1836
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 314 TEDDGGCSSCYRKSSCTHFGAGGEILTFDQLALRAPTGKKTVLVQGQ 174
T+ C++C +S C HF + +LAL +P K+ V + Q
Sbjct: 1488 TKSKPNCNACPMRSECRHFASA---FASARLALPSPQDKRLVNLSNQ 1531
>05_02_0103 - 6628740-6628748,6629150-6629374
Length = 77
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -1
Query: 277 KARARILALEEKFLLLISWLFVLRLARRQYWYKVSEM 167
+AR RI A+ + LL++WLF+ L + +Y +++
Sbjct: 11 RARLRIAAVVARTRLLMNWLFIAGLYHGREFYPTADI 47
>04_04_1385 -
33157557-33157655,33157752-33158201,33158864-33159004,
33159058-33159329,33160371-33160821
Length = 470
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 323 VQDTEDDGGCSSCYRKSSCTHFGAGGEILTFDQLAL 216
V + +D GGC SC+ S+ +I+T D ++L
Sbjct: 141 VAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISL 176
>03_06_0675 +
35455968-35455970,35456314-35456379,35456513-35456565,
35457142-35457169,35457837-35457911,35458020-35458124,
35458278-35458367,35458454-35458543
Length = 169
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +3
Query: 138 RAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSAKMRARAFSVT*RAATVIFGI 317
R + CL S+ + + ++ + + I +K F MRA AF V R + I
Sbjct: 55 RNEAEKCLIETSINSIRISMKVKQADELENILAKKFLRFLSMRAEAFQVLRRKPVQGYDI 114
Query: 318 LYSLTSF 338
+ +T++
Sbjct: 115 SFLITNY 121
>02_05_0718 + 31203358-31203717,31203826-31204011
Length = 181
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -3
Query: 371 GFDCRGSGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGAGGE 243
G D GSGD K R D +DDG Y+K + GE
Sbjct: 122 GDDDDGSGDERKPRYKKHDDDDDGERKPRYKKRDDDDDDSDGE 164
>01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,
4034616-4034839,4035168-4035332,4035591-4035881,
4035971-4036303,4036391-4036485,4036570-4036689,
4036778-4036934,4037176-4037279,4037383-4037543,
4037636-4037952,4038655-4038936,4039020-4039321,
4039453-4039543,4040227-4040280,4040367-4040684,
4041008-4041092,4041178-4041266,4041474-4041594,
4042136-4042431
Length = 1434
Score = 27.5 bits (58), Expect = 9.2
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -2
Query: 291 FMLPKKLVHAFWRW 250
FM+P+K + A+WRW
Sbjct: 1339 FMIPRKRIPAWWRW 1352
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,349,987
Number of Sequences: 37544
Number of extensions: 421934
Number of successful extensions: 1242
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1239
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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