Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30451
(628 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18 pro... 123 5e-28
DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18 p... 123 5e-28
BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18 p... 123 5e-28
BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18 p... 123 5e-28
AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18 p... 123 5e-28
BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18 p... 121 2e-27
Z49155-1|CAA89025.1| 180|Homo sapiens cL83D3.1 (exons 3-7) prot... 30 5.8
L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease prot... 30 5.8
BC036568-1|AAH36568.1| 475|Homo sapiens NOL1/NOP2/Sun domain fa... 30 5.8
AK024063-1|BAB14808.1| 277|Homo sapiens protein ( Homo sapiens ... 30 5.8
AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein. 30 5.8
>L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 123 bits (297), Expect = 5e-28
Identities = 59/97 (60%), Positives = 75/97 (77%)
Frame = -1
Query: 526 LEVTCKLYRYLARRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVG 347
L + KLYR+LARRTN+ FNQ+VL+RLFMSR NRPP+S+SR+ R MK P RE AVVVG
Sbjct: 25 LRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVG 84
Query: 346 TVTNDVRLYKIPKMTVAALHVTEKARARILALEEKFL 236
T+T+DVR+ ++PK+ V AL VT +AR+RIL K L
Sbjct: 85 TITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121
Score = 88.6 bits (210), Expect = 2e-17
Identities = 45/69 (65%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Frame = -3
Query: 254 AGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--E 81
AGG+ILTFDQLAL +P G TVL+ G R RE RHFG APG P SHTKPYVR+KG E
Sbjct: 116 AGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFE 175
Query: 80 KARPSRRAN 54
+AR RRA+
Sbjct: 176 RAR-GRRAS 183
Score = 48.4 bits (110), Expect = 2e-05
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = -2
Query: 594 GIDINHKHDRKVRRTEVKSQDIYLRLLV 511
G+DI H DRKVRR E KSQDIYLRLLV
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLV 29
>DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18
protein.
Length = 164
Score = 123 bits (297), Expect = 5e-28
Identities = 59/97 (60%), Positives = 75/97 (77%)
Frame = -1
Query: 526 LEVTCKLYRYLARRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVG 347
L + KLYR+LARRTN+ FNQ+VL+RLFMSR NRPP+S+SR+ R MK P RE AVVVG
Sbjct: 2 LRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVG 61
Query: 346 TVTNDVRLYKIPKMTVAALHVTEKARARILALEEKFL 236
T+T+DVR+ ++PK+ V AL VT +AR+RIL K L
Sbjct: 62 TITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 98
Score = 88.6 bits (210), Expect = 2e-17
Identities = 45/69 (65%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Frame = -3
Query: 254 AGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--E 81
AGG+ILTFDQLAL +P G TVL+ G R RE RHFG APG P SHTKPYVR+KG E
Sbjct: 93 AGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFE 152
Query: 80 KARPSRRAN 54
+AR RRA+
Sbjct: 153 RAR-GRRAS 160
>BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 123 bits (297), Expect = 5e-28
Identities = 59/97 (60%), Positives = 75/97 (77%)
Frame = -1
Query: 526 LEVTCKLYRYLARRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVG 347
L + KLYR+LARRTN+ FNQ+VL+RLFMSR NRPP+S+SR+ R MK P RE AVVVG
Sbjct: 25 LRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVG 84
Query: 346 TVTNDVRLYKIPKMTVAALHVTEKARARILALEEKFL 236
T+T+DVR+ ++PK+ V AL VT +AR+RIL K L
Sbjct: 85 TITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121
Score = 88.6 bits (210), Expect = 2e-17
Identities = 45/69 (65%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Frame = -3
Query: 254 AGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--E 81
AGG+ILTFDQLAL +P G TVL+ G R RE RHFG APG P SHTKPYVR+KG E
Sbjct: 116 AGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFE 175
Query: 80 KARPSRRAN 54
+AR RRA+
Sbjct: 176 RAR-GRRAS 183
Score = 48.4 bits (110), Expect = 2e-05
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = -2
Query: 594 GIDINHKHDRKVRRTEVKSQDIYLRLLV 511
G+DI H DRKVRR E KSQDIYLRLLV
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLV 29
>BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 123 bits (297), Expect = 5e-28
Identities = 59/97 (60%), Positives = 75/97 (77%)
Frame = -1
Query: 526 LEVTCKLYRYLARRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVG 347
L + KLYR+LARRTN+ FNQ+VL+RLFMSR NRPP+S+SR+ R MK P RE AVVVG
Sbjct: 25 LRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVG 84
Query: 346 TVTNDVRLYKIPKMTVAALHVTEKARARILALEEKFL 236
T+T+DVR+ ++PK+ V AL VT +AR+RIL K L
Sbjct: 85 TITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121
Score = 88.6 bits (210), Expect = 2e-17
Identities = 45/69 (65%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Frame = -3
Query: 254 AGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--E 81
AGG+ILTFDQLAL +P G TVL+ G R RE RHFG APG P SHTKPYVR+KG E
Sbjct: 116 AGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFE 175
Query: 80 KARPSRRAN 54
+AR RRA+
Sbjct: 176 RAR-GRRAS 183
Score = 48.4 bits (110), Expect = 2e-05
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = -2
Query: 594 GIDINHKHDRKVRRTEVKSQDIYLRLLV 511
G+DI H DRKVRR E KSQDIYLRLLV
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLV 29
>AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 123 bits (297), Expect = 5e-28
Identities = 59/97 (60%), Positives = 75/97 (77%)
Frame = -1
Query: 526 LEVTCKLYRYLARRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVG 347
L + KLYR+LARRTN+ FNQ+VL+RLFMSR NRPP+S+SR+ R MK P RE AVVVG
Sbjct: 25 LRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVG 84
Query: 346 TVTNDVRLYKIPKMTVAALHVTEKARARILALEEKFL 236
T+T+DVR+ ++PK+ V AL VT +AR+RIL K L
Sbjct: 85 TITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121
Score = 88.6 bits (210), Expect = 2e-17
Identities = 45/69 (65%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Frame = -3
Query: 254 AGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--E 81
AGG+ILTFDQLAL +P G TVL+ G R RE RHFG APG P SHTKPYVR+KG E
Sbjct: 116 AGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFE 175
Query: 80 KARPSRRAN 54
+AR RRA+
Sbjct: 176 RAR-GRRAS 183
Score = 48.4 bits (110), Expect = 2e-05
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = -2
Query: 594 GIDINHKHDRKVRRTEVKSQDIYLRLLV 511
G+DI H DRKVRR E KSQDIYLRLLV
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLV 29
>BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 121 bits (292), Expect = 2e-27
Identities = 58/97 (59%), Positives = 74/97 (76%)
Frame = -1
Query: 526 LEVTCKLYRYLARRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVG 347
L + KLYR+LARRTN+ FNQ+VL+RLFMSR NRPP+ +SR+ R MK P RE AVVVG
Sbjct: 25 LRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLCLSRMIRKMKLPGRENKTAVVVG 84
Query: 346 TVTNDVRLYKIPKMTVAALHVTEKARARILALEEKFL 236
T+T+DVR+ ++PK+ V AL VT +AR+RIL K L
Sbjct: 85 TITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121
Score = 88.6 bits (210), Expect = 2e-17
Identities = 45/69 (65%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Frame = -3
Query: 254 AGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--E 81
AGG+ILTFDQLAL +P G TVL+ G R RE RHFG APG P SHTKPYVR+KG E
Sbjct: 116 AGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFE 175
Query: 80 KARPSRRAN 54
+AR RRA+
Sbjct: 176 RAR-GRRAS 183
Score = 48.4 bits (110), Expect = 2e-05
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = -2
Query: 594 GIDINHKHDRKVRRTEVKSQDIYLRLLV 511
G+DI H DRKVRR E KSQDIYLRLLV
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLV 29
>Z49155-1|CAA89025.1| 180|Homo sapiens cL83D3.1 (exons 3-7)
protein.
Length = 180
Score = 30.3 bits (65), Expect = 5.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 272 SFFGNMKSSHRHLRYLVQSHVICDCPHYHGNQTLTSWLLHV 394
+F N+KSS +R + C H Q SWLL+V
Sbjct: 138 AFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNV 178
>L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease protein
protein.
Length = 3144
Score = 30.3 bits (65), Expect = 5.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 272 SFFGNMKSSHRHLRYLVQSHVICDCPHYHGNQTLTSWLLHV 394
+F N+KSS +R + C H Q SWLL+V
Sbjct: 256 AFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNV 296
>BC036568-1|AAH36568.1| 475|Homo sapiens NOL1/NOP2/Sun domain
family, member 7 protein.
Length = 475
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -2
Query: 624 SLSWCRIRHEGIDINHKHDRKVRRTEVKSQDIYLRLLVNFTDTWPDVQMPNSIRSFY 454
+L+ CRI+H+ + I H VR+ E+++ + L +N P+ N R Y
Sbjct: 171 ALARCRIKHDALSIYHILPETVRKQELRASTLPLYAWINTCKISPEEVYNNLKRRGY 227
>AK024063-1|BAB14808.1| 277|Homo sapiens protein ( Homo sapiens
cDNA FLJ14001 fis, clone Y79AA1002298. ).
Length = 277
Score = 30.3 bits (65), Expect = 5.8
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -2
Query: 624 SLSWCRIRHEGIDINHKHDRKVRRTEVKSQDIYLRLLVNFTDTWPDVQMPNSIRSFY 454
+L+ CRI+H+ + I H VR+ E+++ + L +N P+ N R Y
Sbjct: 171 ALARCRIKHDALSIYHILPETVRKQELRASTLPLYAWINTCKISPEEVYNNLKRRGY 227
>AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein.
Length = 3144
Score = 30.3 bits (65), Expect = 5.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 272 SFFGNMKSSHRHLRYLVQSHVICDCPHYHGNQTLTSWLLHV 394
+F N+KSS +R + C H Q SWLL+V
Sbjct: 256 AFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNV 296
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,675,416
Number of Sequences: 237096
Number of extensions: 2292093
Number of successful extensions: 5264
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5264
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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