Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30450
         (684 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6R8B1 Cluster: Predicted protein; n=1; Ajellomyces cap...    41   0.032
UniRef50_A0LHB3 Cluster: Putative uncharacterized protein; n=1; ...    37   0.53 
UniRef50_Q2Z1N9 Cluster: Prion-like-(Q/n-rich)-domain-bearing pr...    35   2.1  
UniRef50_Q2AD18 Cluster: Ribosomal protein L25; n=1; Halothermot...    33   6.5  
UniRef50_Q0C890 Cluster: Predicted protein; n=6; Trichocomaceae|...    33   6.5  
UniRef50_A6CWE2 Cluster: Putative uncharacterized protein yieM; ...    33   8.6  
UniRef50_A7D6J0 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  

>UniRef50_A6R8B1 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 1827

 Score = 40.7 bits (91), Expect = 0.032
 Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
 Frame = +3

Query: 6   ASVPAKPLEAIEISPPLNTELADSESSIAESVIQPSIEKSV----PAPDVVPEERGELVT 173
           AS PA  LE ++ S P  TE+AD +++  E V++P   KSV    PAPD  P+   E+ T
Sbjct: 706 ASEPAADLELVQSSTP-ETEVADEQTT--EKVVEPETSKSVDIADPAPDSAPDV-VEIST 761

Query: 174 DIDIGIPERRAQEICVPVTNEIRPE 248
             +   P+     +  P T +I PE
Sbjct: 762 AEEPAAPQIPGDLVANPATTDI-PE 785


>UniRef50_A0LHB3 Cluster: Putative uncharacterized protein; n=1;
           Syntrophobacter fumaroxidans MPOB|Rep: Putative
           uncharacterized protein - Syntrophobacter fumaroxidans
           (strain DSM 10017 / MPOB)
          Length = 687

 Score = 36.7 bits (81), Expect = 0.53
 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +3

Query: 24  PLEAI-EISPPLNTELADSESSIAESVIQPSIEKSVPAPDVVPEERGELVTDIDIGIPER 200
           P +A+ + +PP  +E  +   +  ES +QPS+  S   PD V E    L  DI  G PER
Sbjct: 492 PSDAVPQEAPPRESEAGNGVEAKVESGVQPSVLPSDTVPDSVSE---SLTGDISGGEPER 548

Query: 201 RAQE 212
            A+E
Sbjct: 549 VAEE 552


>UniRef50_Q2Z1N9 Cluster: Prion-like-(Q/n-rich)-domain-bearing
           protein protein 72; n=2; Caenorhabditis|Rep:
           Prion-like-(Q/n-rich)-domain-bearing protein protein 72
           - Caenorhabditis elegans
          Length = 407

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 24/76 (31%), Positives = 37/76 (48%)
 Frame = +3

Query: 9   SVPAKPLEAIEISPPLNTELADSESSIAESVIQPSIEKSVPAPDVVPEERGELVTDIDIG 188
           +VP+  LE I  + P +TE     ++ AE+    S E     P V  E   ELVTD+ I 
Sbjct: 247 TVPSTTLELI--TEPTSTETIPITTTTAETTTTTSEE-----PTVTEETTTELVTDVTIA 299

Query: 189 IPERRAQEICVPVTNE 236
           +P+   ++I   +  E
Sbjct: 300 LPDEEFEDINAKIETE 315


>UniRef50_Q2AD18 Cluster: Ribosomal protein L25; n=1;
           Halothermothrix orenii H 168|Rep: Ribosomal protein L25
           - Halothermothrix orenii H 168
          Length = 218

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
 Frame = +3

Query: 39  EISPPLNTELADSESSIAESVIQPS--IEKSVPAPD--VVPEERGELVTDIDIGIPE 197
           +I PP NT+    E  +  +++ PS  +E+ VPA D  ++PE   E++ + D G  E
Sbjct: 160 DIEPPANTDFITPEDEVIVTIVAPSEAVEEEVPAEDEEIMPEP--EVIGEEDEGDEE 214


>UniRef50_Q0C890 Cluster: Predicted protein; n=6;
           Trichocomaceae|Rep: Predicted protein - Aspergillus
           terreus (strain NIH 2624)
          Length = 317

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 69  ADSESSIAESVIQPSIEKSVPAPDVVPEERGELVTDIDIGIPERR 203
           A+  SS+A +V  P  E ++P+PD  P+ R   +TD      +RR
Sbjct: 18  ANKTSSLASAVAIPEQETALPSPDAPPKRRNSSLTDAPSPDSKRR 62


>UniRef50_A6CWE2 Cluster: Putative uncharacterized protein yieM;
           n=1; Vibrio shilonii AK1|Rep: Putative uncharacterized
           protein yieM - Vibrio shilonii AK1
          Length = 497

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +3

Query: 66  LADSESSIAESVIQPSIEKSVPAPDVVPEERGELVTDIDIGIPE 197
           +AD    +AE V  P + K++   +VV EE+ +  TD  +GI E
Sbjct: 215 IADKLGRMAEEVDAPELNKALSHDEVVVEEKTDFATDDIVGIHE 258


>UniRef50_A7D6J0 Cluster: Putative uncharacterized protein; n=1;
           Halorubrum lacusprofundi ATCC 49239|Rep: Putative
           uncharacterized protein - Halorubrum lacusprofundi ATCC
           49239
          Length = 363

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +3

Query: 30  EAIEISPPLNTELADSESSIAESVIQPSIEKSVPAPDVVPEERGELVTDI-DIGIPERRA 206
           EA  ++  LNT+  D +++ AE+V     E  VPA D V +  G +V  I + G+ E  A
Sbjct: 295 EASIVAGALNTKDVDDDAAAAEAVTDFGDEAGVPAADPVRDGAGRIVDGIVEAGLGEGTA 354


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,278,928
Number of Sequences: 1657284
Number of extensions: 7601692
Number of successful extensions: 27746
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27718
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)