Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30450
         (684 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0132 + 11073057-11073345,11073899-11073903,11074358-110744...    31   1.1  
09_04_0235 + 15904891-15905218,15906732-15907594                       29   3.4  
03_06_0766 - 36106116-36106230,36106598-36106716,36106880-361069...    28   7.9  
02_05_0616 - 30380558-30380822,30380914-30381045,30381138-303812...    28   7.9  

>10_06_0132 +
           11073057-11073345,11073899-11073903,11074358-11074404,
           11074843-11074967,11078036-11078592
          Length = 340

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +3

Query: 90  AESVIQPSIEKSVPAPDVVPEERGELVTDIDIGIPERRAQEICVPV 227
           A S  QP +++ +P       E+G L++ + + +P R A+ +  P+
Sbjct: 192 ASSSTQPEVQEEIPTMGGECREKGALISPLFVHLPARSAEHVRNPI 237


>09_04_0235 + 15904891-15905218,15906732-15907594
          Length = 396

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 3   LASVPAKPLEAIEISPPLNTELADSES 83
           LA VPAKP E +++ PP+   LA +E+
Sbjct: 239 LAKVPAKPAEPVDLMPPVK-PLASTET 264


>03_06_0766 -
           36106116-36106230,36106598-36106716,36106880-36106960,
           36107062-36107118,36107350-36107373,36107810-36107909,
           36107983-36108053,36108132-36108236,36108674-36108847,
           36109406-36109555,36109701-36109871,36109968-36110024,
           36110107-36110142,36110165-36110357,36110439-36110578,
           36110960-36111166,36111442-36111498,36111711-36111809,
           36112289-36112408,36112865-36113032,36113450-36113510,
           36113611-36113720,36114132-36114263,36114344-36114511,
           36115118-36115182,36115242-36115372,36115450-36115487,
           36116272-36116373,36116480-36116537,36117479-36117580,
           36117695-36117909,36118158-36118307,36118699-36118858,
           36118984-36119042,36119287-36119443,36119536-36119681,
           36121376-36121648,36122889-36122891
          Length = 1457

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1

Query: 544 SDPDIRSKCRYAYYAFYHEDCPQSERRSTKTDASIHEAPDIETDG 678
           SDP+    C Y   A   EDC + +    KT   ++++  IE DG
Sbjct: 248 SDPERNYHCFYMLCAAPSEDCKKYKLGEAKTFHYLNQSNCIELDG 292


>02_05_0616 -
           30380558-30380822,30380914-30381045,30381138-30381279,
           30381377-30381569,30381657-30381890,30381992-30382189
          Length = 387

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 461 DVRTPKSAAKTATPRSPPSAK 523
           DVRT K  AKT  P+ P +AK
Sbjct: 229 DVRTEKDKAKTGVPQLPSNAK 249


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,441,378
Number of Sequences: 37544
Number of extensions: 216309
Number of successful extensions: 804
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)