Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30450
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 35 0.062
Z77669-2|CAB01244.2| 120|Caenorhabditis elegans Hypothetical pr... 30 1.8
U50068-7|AAB37735.1| 479|Caenorhabditis elegans Hypothetical pr... 30 1.8
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 3.1
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 3.1
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 3.1
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 29 4.1
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 29 4.1
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 29 4.1
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 29 4.1
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 29 4.1
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 29 4.1
Z83235-1|CAB05775.1| 174|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z66497-11|CAH19102.1| 238|Caenorhabditis elegans Hypothetical p... 28 7.1
Z66497-10|CAH19101.1| 346|Caenorhabditis elegans Hypothetical p... 28 7.1
U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF016442-7|AAB65920.1| 481|Caenorhabditis elegans Hypothetical ... 27 9.4
>AF043704-2|AAX88816.1| 407|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 72
protein.
Length = 407
Score = 34.7 bits (76), Expect = 0.062
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = +3
Query: 9 SVPAKPLEAIEISPPLNTELADSESSIAESVIQPSIEKSVPAPDVVPEERGELVTDIDIG 188
+VP+ LE I + P +TE ++ AE+ S E P V E ELVTD+ I
Sbjct: 247 TVPSTTLELI--TEPTSTETIPITTTTAETTTTTSEE-----PTVTEETTTELVTDVTIA 299
Query: 189 IPERRAQEICVPVTNE 236
+P+ ++I + E
Sbjct: 300 LPDEEFEDINAKIETE 315
>Z77669-2|CAB01244.2| 120|Caenorhabditis elegans Hypothetical
protein T07F10.5 protein.
Length = 120
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 167 EFSTFFGHYVGCRYRFFDRRLNYRFCD*TFGICQLCIQRWRNFYRFQRFC 18
E S HY+ RYR D N+R + T IC + NF++F FC
Sbjct: 70 ELSPIDAHYL--RYRPSDADQNHRINNSTKFICSFFMFNKHNFWQFFSFC 117
>U50068-7|AAB37735.1| 479|Caenorhabditis elegans Hypothetical
protein C01G5.3 protein.
Length = 479
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 60 TELADSESSIAESVIQP-SIEKSVPAPDVVPEERGELVTDIDIGIPERRAQEICVPVTN 233
T AD + ++P +IEK V +VV E++ TD+ + Q+IC+P+ N
Sbjct: 392 TPKADPAENTPTQAVEPINIEKEVNESEVVVEKKE---TDVVVENKNDEIQDICIPLKN 447
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 15 PAKPLEAIEISPPLNTELADSE-SSIAESVIQPSIEK--SVPAPDVVPEERGELVTDIDI 185
P + E E+ P E D + ++P++EK SV + + ++ E++ D+
Sbjct: 5283 PVESKETSEVEPAEIVEQKDVPVPETSAPTVEPTVEKLKSVESKETSEVQQAEIIEQKDV 5342
Query: 186 GIPERRAQEICVPVTNEIRPEEA 254
+PE A + P ++ P ++
Sbjct: 5343 PVPETSAPTV-EPTVEKLAPVDS 5364
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +3
Query: 15 PAKPLEAIEISPPLNTELADSE-SSIAESVIQPSIEK--SVPAPDVVPEERGELVTDIDI 185
P + E E+ P E D + ++P++EK SV + + ++ E++ D+
Sbjct: 5424 PVESKETSEVEPAEIVEQKDVPVPETSAPTVEPTVEKLKSVESKETSEVQQAEIIEQKDV 5483
Query: 186 GIPERRAQEICVPVTNEIRPEEA 254
+PE A + P + P E+
Sbjct: 5484 PVPETSAPTV-EPTVEKHAPVES 5505
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 15 PAKPLEAIEISPPLNTELADSE-SSIAESVIQPSIEK--SVPAPDVVPEERGELVTDIDI 185
P + E E+ P E D + ++P++EK SV + + ++ E++ D+
Sbjct: 5283 PVESKETSEVEPAEIVEQKDVPVPETSAPTVEPTVEKLKSVESKETSEVQQAEIIEQKDV 5342
Query: 186 GIPERRAQEICVPVTNEIRPEEA 254
+PE A + P ++ P ++
Sbjct: 5343 PVPETSAPTV-EPTVEKLAPVDS 5364
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +3
Query: 15 PAKPLEAIEISPPLNTELADSE-SSIAESVIQPSIEK--SVPAPDVVPEERGELVTDIDI 185
P + E E+ P E D + ++P++EK SV + + ++ E++ D+
Sbjct: 5444 PVESKETSEVEPAEIVEQKDVPVPETSAPTVEPTVEKLKSVESKETSEVQQAEIIEQKDV 5503
Query: 186 GIPERRAQEICVPVTNEIRPEEA 254
+PE A + P + P E+
Sbjct: 5504 PVPETSAPTV-EPTVEKHAPVES 5525
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 15 PAKPLEAIEISPPLNTELADSE-SSIAESVIQPSIEK--SVPAPDVVPEERGELVTDIDI 185
P + E E+ P E D + ++P++EK SV + + ++ E++ D+
Sbjct: 5283 PVESKETSEVEPAEIVEQKDVPVPETSAPTVEPTVEKLKSVESKETSEVQQAEIIEQKDV 5342
Query: 186 GIPERRAQEICVPVTNEIRPEEA 254
+PE A + P ++ P ++
Sbjct: 5343 PVPETSAPTV-EPTVEKLAPVDS 5364
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +3
Query: 15 PAKPLEAIEISPPLNTELADSE-SSIAESVIQPSIEK--SVPAPDVVPEERGELVTDIDI 185
P + E E+ P E D + ++P++EK SV + + ++ E++ D+
Sbjct: 5444 PVESKETSEVEPAEIVEQKDVPVPETSAPTVEPTVEKLKSVESKETSEVQQAEIIEQKDV 5503
Query: 186 GIPERRAQEICVPVTNEIRPEEA 254
+PE A + P + P E+
Sbjct: 5504 PVPETSAPTV-EPTVEKHAPVES 5525
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 15 PAKPLEAIEISPPLNTELADSESSIAESVIQPSIEKSVPAPDVV 146
P P +E PLN E + S + + PSI +S+ AP +V
Sbjct: 4544 PETPETVLEEEKPLNQETSPPTSPTSPASKAPSIYESIGAPQMV 4587
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 15 PAKPLEAIEISPPLNTELADSESSIAESVIQPSIEKSVPAPDVV 146
P P +E PLN E + S + + PSI +S+ AP +V
Sbjct: 4536 PETPETVLEEEKPLNQETSPPTSPTSPASKAPSIYESIGAPQMV 4579
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 30 EAIEISPPLNTELADSESSIAESVIQPSIEKS-VPAPDVVPEERGELVTDID 182
EA + PP+NTE ++ + E ++ + EK V DV PE+ + + D
Sbjct: 182 EAEAVEPPINTENQENALEMLEERLKKNEEKEIVEKSDVKPEDEDIIHMETD 233
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 30 EAIEISPPLNTELADSESSIAESVIQPSIEKS-VPAPDVVPEERGELVTDID 182
EA + PP+NTE ++ + E ++ + EK V DV PE+ + + D
Sbjct: 219 EAEAVEPPINTENQENALEMLEERLKKNEEKEIVEKSDVKPEDEDIIHMETD 270
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 30 EAIEISPPLNTELADSESSIAESVIQPSIEKS-VPAPDVVPEERGELVTDID 182
EA + PP+NTE ++ + E ++ + EK V DV PE+ + + D
Sbjct: 219 EAEAVEPPINTENQENALEMLEERLKKNEEKEIVEKSDVKPEDEDIIHMETD 270
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 30 EAIEISPPLNTELADSESSIAESVIQPSIEKS-VPAPDVVPEERGELVTDID 182
EA + PP+NTE ++ + E ++ + EK V DV PE+ + + D
Sbjct: 219 EAEAVEPPINTENQENALEMLEERLKKNEEKEIVEKSDVKPEDEDIIHMETD 270
>Z83235-1|CAB05775.1| 174|Caenorhabditis elegans Hypothetical
protein K10C3.2 protein.
Length = 174
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Frame = +3
Query: 15 PAKPLEAIEISP-PLNTELADSESSIAESVIQPSIEKS-------VPAPDVVPEERGELV 170
PA P + SP P T + S S I++ +PS +++ +P PD VP+ + ++
Sbjct: 88 PAAPPVVAQRSPAPAATTPSPSASPISQQTNRPSSDRNSDDDNLQIPRPDTVPQRKASII 147
>Z66497-11|CAH19102.1| 238|Caenorhabditis elegans Hypothetical
protein K08F8.1e protein.
Length = 238
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 550 PDIRSKCRYAYYAFYHE--DCPQSERRSTKT 636
P +RS+ AYYAF HE DC + + +T
Sbjct: 195 PGMRSRIANAYYAFPHEEWDCVSKDSKRLET 225
>Z66497-10|CAH19101.1| 346|Caenorhabditis elegans Hypothetical
protein K08F8.1d protein.
Length = 346
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 550 PDIRSKCRYAYYAFYHE--DCPQSERRSTKT 636
P +RS+ AYYAF HE DC + + +T
Sbjct: 303 PGMRSRIANAYYAFPHEEWDCVSKDSKRLET 333
>U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical
protein B0507.3 protein.
Length = 432
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 6 ASVPAKPLEAIEISPPLNTELADSESSIAE-SVIQPSIEKSVPAPDVVPE 152
+S P+ P+ A + P EL SS+++ + + P +EK P P P+
Sbjct: 332 SSKPSTPIPAPPVLVP-QVELPAKTSSVSQKTTVSPPVEKVTPPPQHPPQ 380
>AF016442-7|AAB65920.1| 481|Caenorhabditis elegans Hypothetical
protein K12B6.7 protein.
Length = 481
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 51 PLNTELADSESSIAESVIQPSIEKSVPAPDVVPEER 158
PL+TE+A IA + +EKS +P ++R
Sbjct: 443 PLDTEMAGKNFEIARGIFTQRVEKSKRSPKTFGKDR 478
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,056,131
Number of Sequences: 27780
Number of extensions: 189205
Number of successful extensions: 713
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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