Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30448
         (815 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006655-6|AAF39878.2|  383|Caenorhabditis elegans Hypothetical ...    29   5.3  
Z74037-2|CAD36492.1|  441|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z74037-1|CAA98492.1|  510|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclas...    28   7.0  
U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclas...    28   7.0  
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l...    28   7.0  
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr...    28   9.2  
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical...    28   9.2  

>AC006655-6|AAF39878.2|  383|Caenorhabditis elegans Hypothetical
           protein H10D18.6 protein.
          Length = 383

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 281 LEIVGDDAKVIHLTNLMKKMLSYGQYNMDKYTY 379
           +E VG    + H+T    KM S+ +YN D Y Y
Sbjct: 301 VEFVGKYGPLHHMTPYSLKMSSFQRYNYDIYVY 333


>Z74037-2|CAD36492.1|  441|Caenorhabditis elegans Hypothetical
           protein F57B7.1b protein.
          Length = 441

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 764 CHAVVLGPRKMRTTASTVLSDMTSIDT 684
           C+ VVL  R MRT  + +L+ M S DT
Sbjct: 51  CNIVVLTRRTMRTPVNMILTAMASCDT 77


>Z74037-1|CAA98492.1|  510|Caenorhabditis elegans Hypothetical
           protein F57B7.1a protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 764 CHAVVLGPRKMRTTASTVLSDMTSIDT 684
           C+ VVL  R MRT  + +L+ M S DT
Sbjct: 51  CNIVVLTRRTMRTPVNMILTAMASCDT 77


>U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclase
           protein 7, isoforma protein.
          Length = 1045

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 361 HGQVHLRADFLGHVHYLSPRSCLLDDH-ETSLQHLHRFQEHAPEIYSR 501
           HG V L    +G+   L+ + CL+DD  +  + +       +PE+Y +
Sbjct: 668 HGLVFLHGSMVGYHGMLTSKCCLIDDRWQVKISNYGLQDLRSPEMYEK 715


>U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclase
           protein 7, isoformb protein.
          Length = 1111

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 361 HGQVHLRADFLGHVHYLSPRSCLLDDH-ETSLQHLHRFQEHAPEIYSR 501
           HG V L    +G+   L+ + CL+DD  +  + +       +PE+Y +
Sbjct: 668 HGLVFLHGSMVGYHGMLTSKCCLIDDRWQVKISNYGLQDLRSPEMYEK 715


>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
           lipoprotein receptorrelated protein 2 protein.
          Length = 2192

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 814 SCPARTCRAFVVDAHEPAMQSYLDPGRCGPQHRQFCR 704
           SCP   C  F +D  +   Q +  PG    ++++ CR
Sbjct: 455 SCPKANCSHFCIDRRDVGHQCFCAPGYILSENQKDCR 491


>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical
           protein F15D4.7 protein.
          Length = 2268

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 12  DVKPMMWNEPLETGYWPKIRLPSGD 86
           +  P++W EP  TG   KIR+P  D
Sbjct: 738 EADPIVWKEPAGTGSKMKIRVPPTD 762


>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
           protein F15D4.7 protein.
          Length = 2268

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 12  DVKPMMWNEPLETGYWPKIRLPSGD 86
           +  P++W EP  TG   KIR+P  D
Sbjct: 738 EADPIVWKEPAGTGSKMKIRVPPTD 762


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,797,112
Number of Sequences: 27780
Number of extensions: 397214
Number of successful extensions: 1295
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)