Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30447
         (689 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    25   2.3  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   3.0  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    24   3.9  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   6.9  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   9.1  

>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +3

Query: 477 PFENNTVRLDLMDENGKTPPGYTTWQFNFKFNLQEDMYAQDSID 608
           P E N +++       K+P  +TT   +   NL  DM   D ID
Sbjct: 125 PGEENVIKVYSSKSLRKSPQAHTTDDESSFDNLNNDMKGHDFID 168


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 301  IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGV 405
            I  V N N  + +  I  + QKY W+  D EF GV
Sbjct: 915  ITKVRNEN-KDGYDRISGMEQKYPWIPEDKEFFGV 948


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 221 RLETDKRYKMPSQVLVPYH 277
           R++  K +KM S  +VPYH
Sbjct: 332 RMKWKKEHKMASMNIVPYH 350


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 307 DVWNHNLHEEFQIIRQVVQKYHWVAMDTEFP 399
           D + H L+E+ Q++     +Y  ++MDT  P
Sbjct: 8   DSYRHELYEQQQLLGTSPIQYTVLSMDTPSP 38


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 348 QTGSPKVSLGSYGYRISRSSCTTNWRI 428
           Q  SP++S   YG+R  RS+ +   R+
Sbjct: 592 QQDSPQLSDAQYGFRRGRSTISAIQRV 618


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,635
Number of Sequences: 2352
Number of extensions: 15238
Number of successful extensions: 38
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)