Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30445
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   120   8e-30
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   120   8e-30
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   106   2e-25
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.14 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   5.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.2  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  120 bits (290), Expect = 8e-30
 Identities = 54/84 (64%), Positives = 73/84 (86%)
 Frame = +2

Query: 2   SIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGS 181
           SIEIDSLF+GID+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+ +H+IVLVGGS
Sbjct: 109 SIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGS 168

Query: 182 TRIPKVQKLLQDFFNGKELNKSIN 253
           TRIPKVQ+L+ ++FNGKE  +SIN
Sbjct: 169 TRIPKVQQLITEYFNGKEPCRSIN 192


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  120 bits (290), Expect = 8e-30
 Identities = 54/84 (64%), Positives = 73/84 (86%)
 Frame = +2

Query: 2   SIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGS 181
           SIEIDSLF+GID+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+ +H+IVLVGGS
Sbjct: 109 SIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGS 168

Query: 182 TRIPKVQKLLQDFFNGKELNKSIN 253
           TRIPKVQ+L+ ++FNGKE  +SIN
Sbjct: 169 TRIPKVQQLITEYFNGKEPCRSIN 192


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  106 bits (254), Expect = 2e-25
 Identities = 49/84 (58%), Positives = 66/84 (78%)
 Frame = +2

Query: 2   SIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGS 181
           ++ I++L    DF  ++TRA+FEELN D F  T++PV+K L DA M K QI +IVLVGGS
Sbjct: 108 TLTIENLLADYDFSETLTRAKFEELNNDQFLKTLKPVKKVLEDADMTKDQIDEIVLVGGS 167

Query: 182 TRIPKVQKLLQDFFNGKELNKSIN 253
           TRIPK+Q+L++DFF+GKELN+ IN
Sbjct: 168 TRIPKIQQLIKDFFDGKELNRGIN 191


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -3

Query: 155 GFEPY-PSWHHGETSPLAPW*T*TDRRSAPRSEHE 54
           GF P+ PS H G   P  PW T  D R   +  H+
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYRPWVQHGHQ 502


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 170 PVQYRGFEPYPSWHHGETSPLAP 102
           PV      P+ + HHG T P +P
Sbjct: 17  PVVLDVIPPHYNIHHGATPPQSP 39


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +2

Query: 560 AAW-VPQIEVTFDIDANGILNVSAIEKSTNK 649
           A W V  I+   D+D NG  N + ++K+  K
Sbjct: 64  ADWSVLVIDPELDVDQNGFRNFTNLKKTHPK 94


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 196 LGDTSGATHQYNIVDLSLIHLGITE 122
           LG+T  +   Y++V++S IH  + +
Sbjct: 194 LGETWTSLSVYHLVEISEIHFDLCQ 218


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 196 LGDTSGATHQYNIVDLSLIHLGITE 122
           LG+T  +   Y++V++S IH  + +
Sbjct: 190 LGETWTSLSVYHLVEISEIHFDLCQ 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,222
Number of Sequences: 336
Number of extensions: 3176
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)