Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30444
(838 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 32 0.58
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 31 1.0
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 31 1.0
U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucos... 29 3.1
U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucos... 29 3.1
DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide glyc... 29 3.1
DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide glyc... 29 3.1
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 4.1
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 29 5.4
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 29 5.4
Z70718-10|CAA94679.1| 512|Caenorhabditis elegans Hypothetical p... 28 7.2
Z68879-11|CAA93090.1| 512|Caenorhabditis elegans Hypothetical p... 28 7.2
Z22173-2|CAA80126.1| 327|Caenorhabditis elegans Hypothetical pr... 28 7.2
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 31.9 bits (69), Expect = 0.58
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 115 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 228
LYM +G+Y+ A KC +Y K+ G+ EA++ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -3
Query: 206 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 27
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 26 S 24
S
Sbjct: 136 S 136
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -3
Query: 206 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 27
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 26 S 24
S
Sbjct: 136 S 136
>U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform c protein.
Length = 379
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -3
Query: 161 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 9
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform b protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -3
Query: 161 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 9
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -3
Query: 161 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 9
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -3
Query: 161 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 9
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 201 DNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLRQYVISSWCKCGVRSQRTHGEDEG 37
DN + + Q FR+ G S + + + ISSW +C + GEDEG
Sbjct: 795 DNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEG 849
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = -2
Query: 255 QVHGVPLAVFDQTLHGFLDNLSLLFLQI----FRAFGDSGLVFTNDDTHIQLLRQ 103
Q G+P +Q L F N + L+I R GD+ +VFTN++ + L++
Sbjct: 8 QCRGLPWEATEQELRDFFGNNGIESLEIPRRNGRTSGDAKVVFTNEEDYNNALKK 62
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = -2
Query: 255 QVHGVPLAVFDQTLHGFLDNLSLLFLQI----FRAFGDSGLVFTNDDTHIQLLRQ 103
Q G+P +Q L F N + L+I R GD+ +VFTN++ + L++
Sbjct: 8 QCRGLPWEATEQELRDFFGNNGIESLEIPRRNGRTSGDAKVVFTNEEDYNNALKK 62
>Z70718-10|CAA94679.1| 512|Caenorhabditis elegans Hypothetical
protein C04G2.11 protein.
Length = 512
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/86 (24%), Positives = 39/86 (45%)
Frame = -1
Query: 748 TGNFSAVPQGFTVFVGGHIFIKCHNTVVLSVVDEEHDVAFVHGGLKVPVVFEGVSGAITV 569
TG +AVP T ++G +F N + D + +K FE + G I +
Sbjct: 347 TGKLTAVPDRCTRYIGNILF---ENYMTSDYEDITNYTKISQVDMKRVQQFEVIFGTIYI 403
Query: 568 DDTVITRTFRVIELQVLFVLVDMILK 491
T + ++F + LQ ++ + D++ K
Sbjct: 404 QGTTL-KSFTLPNLQEIYQVEDIVNK 428
>Z68879-11|CAA93090.1| 512|Caenorhabditis elegans Hypothetical
protein C04G2.11 protein.
Length = 512
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/86 (24%), Positives = 39/86 (45%)
Frame = -1
Query: 748 TGNFSAVPQGFTVFVGGHIFIKCHNTVVLSVVDEEHDVAFVHGGLKVPVVFEGVSGAITV 569
TG +AVP T ++G +F N + D + +K FE + G I +
Sbjct: 347 TGKLTAVPDRCTRYIGNILF---ENYMTSDYEDITNYTKISQVDMKRVQQFEVIFGTIYI 403
Query: 568 DDTVITRTFRVIELQVLFVLVDMILK 491
T + ++F + LQ ++ + D++ K
Sbjct: 404 QGTTL-KSFTLPNLQEIYQVEDIVNK 428
>Z22173-2|CAA80126.1| 327|Caenorhabditis elegans Hypothetical
protein C15H7.4 protein.
Length = 327
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 73 ATLAPRTDDVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGK---RN 243
AT +P + L ++ +V G E +A + EKK EV+ + +EN K RN
Sbjct: 136 ATTSPTIESDLTDKPDTNVYTGSREGYVAPSEKGSNEKKKEVVPNGGDKSVENKKGSDRN 195
Query: 244 TMDLPT 261
P+
Sbjct: 196 VKKTPS 201
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,379,838
Number of Sequences: 27780
Number of extensions: 420137
Number of successful extensions: 1486
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1486
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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