Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30443
(547 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 1.5
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 1.5
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 23 2.0
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 22 3.5
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 4.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 4.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 4.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 4.7
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 4.7
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 4.7
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 4.7
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 4.7
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 4.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 4.7
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.4 bits (48), Expect = 1.5
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 392 SCCPWCC 412
SCC WCC
Sbjct: 10 SCCCWCC 16
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.4 bits (48), Expect = 1.5
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +1
Query: 91 KDYHAPKHTELEKI--PNLQVIKAMQSLKSRGYVKEQ 195
KD P + KI PN+ +IK L G V E+
Sbjct: 242 KDAKVPIIVAINKIDKPNIDIIKVQYELAKHGIVIEE 278
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 23.0 bits (47), Expect = 2.0
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -1
Query: 313 SVRTERLSVAGTISGGRCKKFSSIQYPHWLGT 218
+V TE++ VA ++ K S+++Y H++GT
Sbjct: 146 AVATEKMFVARHLAETP-KNTSAVRYTHYIGT 176
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 22.2 bits (45), Expect = 3.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 201 LEALLLVPNQ*GY*ILENFLHL 266
+EA +L PNQ Y L NF H+
Sbjct: 349 MEASILSPNQNVYGDLHNFGHV 370
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.8 bits (44), Expect = 4.7
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 330 PVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADV 437
P R P+R R RRTP V+ D+ + +
Sbjct: 394 PPPRQTPPSRKESGRRRRRRTPRYNSVSKIDRASRI 429
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 4.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 90 FGHHDSLFKEVLINSNTVLFGHQHLESRL 4
+ HHD FK++ N + + E RL
Sbjct: 8 YSHHDEKFKQLRNEDNKIDLRSRTKEERL 36
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 4.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 90 FGHHDSLFKEVLINSNTVLFGHQHLESRL 4
+ HHD FK++ N + + E RL
Sbjct: 8 YSHHDEKFKQLRNEDNKIDLRSRTKEERL 36
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 4.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 90 FGHHDSLFKEVLINSNTVLFGHQHLESRL 4
+ HHD FK++ N + + E RL
Sbjct: 8 YSHHDEKFKQLRNEDNKIDLRSRTKEERL 36
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 4.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 90 FGHHDSLFKEVLINSNTVLFGHQHLESRL 4
+ HHD FK++ N + + E RL
Sbjct: 8 YSHHDEKFKQLRNEDNKIDLRSRTKEERL 36
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 4.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 90 FGHHDSLFKEVLINSNTVLFGHQHLESRL 4
+ HHD FK++ N + + E RL
Sbjct: 8 YSHHDEKFKQLRNEDNKIDLRSRTKEERL 36
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 4.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 90 FGHHDSLFKEVLINSNTVLFGHQHLESRL 4
+ HHD FK++ N + + E RL
Sbjct: 8 YSHHDEKFKQLRNEDNKIDLRSRTKEERL 36
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 4.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 90 FGHHDSLFKEVLINSNTVLFGHQHLESRL 4
+ HHD FK++ N + + E RL
Sbjct: 8 YSHHDEKFKQLRNEDNKIDLRSRTKEERL 36
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 4.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 90 FGHHDSLFKEVLINSNTVLFGHQHLESRL 4
+ HHD FK++ N + + E RL
Sbjct: 8 YSHHDEKFKQLRNEDNEIDLRSRTKEERL 36
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 4.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 90 FGHHDSLFKEVLINSNTVLFGHQHLESRL 4
+ HHD FK++ N + + E RL
Sbjct: 8 YSHHDEKFKQLRNEDNKIDLRSRTKEERL 36
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,092
Number of Sequences: 438
Number of extensions: 2420
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -