Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30442
(713 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 27 0.20
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 23 1.9
EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-deca... 23 3.3
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 22 4.3
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 5.7
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 5.7
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 5.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 5.7
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 5.7
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 5.7
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 5.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 5.7
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 21 7.5
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 21 9.9
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 9.9
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 9.9
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 26.6 bits (56), Expect = 0.20
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 83 RCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSP 178
R R VVPP C P+T+ P P D++ P
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIP 227
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 23.4 bits (48), Expect = 1.9
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = +2
Query: 23 RSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
+ + +S P S T + P ++CW +++ +P P + + PTPS
Sbjct: 292 QQATPYSAPGPTYSTWSTVQTPTTVMSPTINCW---SLTSSPPPPYQISAQPTPS 343
>EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate
1-decarboxylase protein.
Length = 540
Score = 22.6 bits (46), Expect = 3.3
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -3
Query: 687 STDPYGVLPLWRSNDLN 637
+ DPYG++ W ++ LN
Sbjct: 141 AVDPYGLVAQWATDALN 157
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 22.2 bits (45), Expect = 4.3
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +3
Query: 237 PHRA-RLSFTTTAEREIV-RDINEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 398
PH A + + +RE + D N+ DF ++ +S L+ SY+ P Q
Sbjct: 31 PHTAWQFGVSQIVKREPMDEDKNDSGVTSGSDFHSSSPSSDTSQDLQHSYQSPQTQ 86
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 50 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASS 172
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 50 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 50 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 50 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 50 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 50 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 83 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 128
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 50 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 50 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 21.4 bits (43), Expect = 7.5
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +3
Query: 144 HRAHLRRIRTPPRHPASGLSRSRP 215
H+A +R + PP+ RS P
Sbjct: 62 HKAPIRPVALPPKREIPSPKRSSP 85
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 21.0 bits (42), Expect = 9.9
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 98 VVPP-VSCWTPATVSPTPCPS-TKDTHSPTPS 187
V+PP + AT +P TKD SPTPS
Sbjct: 22 VIPPHYNIHHGATPPQSPNQQYTKDCSSPTPS 53
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +3
Query: 216 HRLPHEDPHRARLSFTTTAEREIVRDIN 299
H + H+DPH + T T + + +N
Sbjct: 439 HPVYHKDPHYGFHNVTNTTLQNLTPQLN 466
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/33 (27%), Positives = 13/33 (39%)
Frame = -3
Query: 150 HGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 52
HG V G+ ++ +H LD D G
Sbjct: 600 HGYAFNVVGIGRSPDQNVKKINLKHALDLDRRG 632
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,832
Number of Sequences: 336
Number of extensions: 4696
Number of successful extensions: 22
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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