Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30442
(713 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 174 7e-44
SB_56| Best HMM Match : Actin (HMM E-Value=0) 174 7e-44
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 174 7e-44
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 1e-43
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 168 4e-42
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 3e-41
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 151 7e-37
SB_54| Best HMM Match : Actin (HMM E-Value=0) 141 6e-34
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 128 3e-30
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 1e-27
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 107 9e-24
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 81 9e-16
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 62 6e-10
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 61 8e-10
SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.057
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 35 0.075
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.100
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.100
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.100
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 32 0.40
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 32 0.40
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 32 0.40
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 32 0.53
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 32 0.53
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.70
SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18) 31 0.70
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 31 1.2
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_53874| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_12796| Best HMM Match : Radical_SAM (HMM E-Value=8.9e-24) 30 1.6
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.6
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.6
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 30 2.1
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 30 2.1
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.1
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 2.8
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 29 2.8
SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1) 29 3.7
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14) 29 4.9
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 29 4.9
SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0) 29 4.9
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 4.9
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 4.9
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5) 29 4.9
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 4.9
SB_55120| Best HMM Match : DUF854 (HMM E-Value=8.5) 29 4.9
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 4.9
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 29 4.9
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 4.9
SB_614| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_59762| Best HMM Match : Vicilin_N (HMM E-Value=4) 28 6.5
SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 6.5
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 6.5
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 6.5
SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05) 28 6.5
SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21) 28 6.5
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 28 6.5
SB_40264| Best HMM Match : DUF667 (HMM E-Value=0) 28 6.5
SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009) 28 6.5
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 28 6.5
SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6) 28 6.5
SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0) 28 6.5
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 28 8.6
SB_50187| Best HMM Match : SAM_1 (HMM E-Value=3.1e-21) 28 8.6
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_41475| Best HMM Match : HSA (HMM E-Value=7.5) 28 8.6
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 28 8.6
SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 28 8.6
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 28 8.6
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 8.6
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 28 8.6
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 8.6
SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 8.6
SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08) 28 8.6
SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12) 28 8.6
SB_31091| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097) 28 8.6
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07) 28 8.6
SB_15371| Best HMM Match : Keratin_B2 (HMM E-Value=1.2) 28 8.6
SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4) 28 8.6
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_7700| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.045) 28 8.6
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 174 bits (423), Expect = 7e-44
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +1
Query: 1 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 180
ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPH
Sbjct: 114 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPH 173
Query: 181 AILRLDLAGRDLTDYLMKILTERGY 255
AILRLDLAGRDLTDYLMKILTERGY
Sbjct: 174 AILRLDLAGRDLTDYLMKILTERGY 198
Score = 165 bits (401), Expect = 3e-41
Identities = 78/85 (91%), Positives = 82/85 (96%)
Frame = +3
Query: 255 SFTTTAEREIVRDINEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 434
SFTTTAEREIVRDI EKL YVALDFEQEMATAA+SSSLEKSYELPDGQVITIGNERFRCP
Sbjct: 199 SFTTTAEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCP 258
Query: 435 EALFQPSFLGMEACGIHETTYNSII 509
EA+FQPSFLGME+ GIHETTYNSI+
Sbjct: 259 EAMFQPSFLGMESAGIHETTYNSIM 283
Score = 118 bits (285), Expect = 4e-27
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +1
Query: 532 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 711
DLYANTVLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 292 DLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLST 351
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 174 bits (423), Expect = 7e-44
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +1
Query: 1 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 180
ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPH
Sbjct: 114 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPH 173
Query: 181 AILRLDLAGRDLTDYLMKILTERGY 255
AILRLDLAGRDLTDYLMKILTERGY
Sbjct: 174 AILRLDLAGRDLTDYLMKILTERGY 198
Score = 168 bits (408), Expect = 4e-42
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +3
Query: 255 SFTTTAEREIVRDINEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 434
SFTTTAEREIVRDI EKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCP
Sbjct: 199 SFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCP 258
Query: 435 EALFQPSFLGMEACGIHETTYNSII 509
EA+FQPSFLGME+ GIHETTYNSI+
Sbjct: 259 EAMFQPSFLGMESAGIHETTYNSIM 283
Score = 120 bits (290), Expect = 9e-28
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 532 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 711
DLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 292 DLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLST 351
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 174 bits (423), Expect = 7e-44
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +1
Query: 1 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 180
ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPH
Sbjct: 115 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPH 174
Query: 181 AILRLDLAGRDLTDYLMKILTERGY 255
AILRLDLAGRDLTDYLMKILTERGY
Sbjct: 175 AILRLDLAGRDLTDYLMKILTERGY 199
Score = 168 bits (409), Expect = 3e-42
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +3
Query: 255 SFTTTAEREIVRDINEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 434
SFTTTAEREIVRDI EKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCP
Sbjct: 200 SFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCP 259
Query: 435 EALFQPSFLGMEACGIHETTYNSII 509
EA+FQPSFLGME+ GIHETTYNSI+
Sbjct: 260 EAMFQPSFLGMESAGIHETTYNSIM 284
Score = 120 bits (289), Expect = 1e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 532 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 711
DLYANTVLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLST 352
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 173 bits (421), Expect = 1e-43
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +1
Query: 1 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 180
ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPH
Sbjct: 115 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPH 174
Query: 181 AILRLDLAGRDLTDYLMKILTERGY 255
AI+RLDLAGRDLTDYLMKILTERGY
Sbjct: 175 AIIRLDLAGRDLTDYLMKILTERGY 199
Score = 168 bits (408), Expect = 4e-42
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +3
Query: 255 SFTTTAEREIVRDINEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 434
SFTTTAEREIVRDI EKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCP
Sbjct: 200 SFTTTAEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCP 259
Query: 435 EALFQPSFLGMEACGIHETTYNSII 509
EA+FQPSFLGME+ GIHETTYNSI+
Sbjct: 260 EAMFQPSFLGMESAGIHETTYNSIM 284
Score = 120 bits (290), Expect = 9e-28
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 532 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 711
DLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLST 352
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 168 bits (408), Expect = 4e-42
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +3
Query: 255 SFTTTAEREIVRDINEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 434
SFTTTAEREIVRDI EKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCP
Sbjct: 162 SFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCP 221
Query: 435 EALFQPSFLGMEACGIHETTYNSII 509
EA+FQPSFLGME+ GIHETTYNSI+
Sbjct: 222 EAMFQPSFLGMESAGIHETTYNSIM 246
Score = 161 bits (390), Expect = 7e-40
Identities = 75/84 (89%), Positives = 81/84 (96%)
Frame = +1
Query: 4 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 183
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 184 ILRLDLAGRDLTDYLMKILTERGY 255
I+RLDLAGRDLTDYLMKILTERGY
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGY 161
Score = 122 bits (293), Expect = 4e-28
Identities = 58/60 (96%), Positives = 59/60 (98%)
Frame = +1
Query: 532 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 711
DLYANTVLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 255 DLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLST 314
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 165 bits (401), Expect = 3e-41
Identities = 78/85 (91%), Positives = 81/85 (95%)
Frame = +3
Query: 255 SFTTTAEREIVRDINEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 434
SFTTTAEREIVRDI EKLCYVALDFEQEM TAASSSS+EKSYELPDGQVITIGNERFRCP
Sbjct: 173 SFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCP 232
Query: 435 EALFQPSFLGMEACGIHETTYNSII 509
EAL QPSFLGME+ GIHETTYNSI+
Sbjct: 233 EALLQPSFLGMESSGIHETTYNSIM 257
Score = 122 bits (294), Expect = 3e-28
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +1
Query: 532 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 711
DLYANTV+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 266 DLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLST 325
Score = 111 bits (267), Expect = 5e-25
Identities = 54/59 (91%), Positives = 57/59 (96%), Gaps = 2/59 (3%)
Frame = +1
Query: 1 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 171
ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 115 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 151 bits (365), Expect = 7e-37
Identities = 69/77 (89%), Positives = 74/77 (96%)
Frame = +1
Query: 25 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 204
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 205 GRDLTDYLMKILTERGY 255
GRDLTDYLMK++TERGY
Sbjct: 61 GRDLTDYLMKLMTERGY 77
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +3
Query: 255 SFTTTAEREIVRDINEKLCYVALDFEQEM 341
SFTTTAEREIVRDI EKLCYVALDF QE+
Sbjct: 78 SFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 141 bits (341), Expect = 6e-34
Identities = 61/84 (72%), Positives = 73/84 (86%)
Frame = +1
Query: 4 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 183
NRE+M Q+MFE+FN P MYVA+QAV++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA
Sbjct: 2160 NRERMVQLMFESFNVPCMYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHA 2219
Query: 184 ILRLDLAGRDLTDYLMKILTERGY 255
R+DLAGRDLT YL +++TERGY
Sbjct: 2220 TQRIDLAGRDLTHYLQRLVTERGY 2243
Score = 101 bits (242), Expect = 6e-22
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = +3
Query: 255 SFTTTAEREIVRDINEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 434
SF +TAE++I+RD+ E LCY A+D+E+E+ A +S E Y LPDGQ I IG+ERFR
Sbjct: 2244 SFQSTAEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAA 2303
Query: 435 EALFQPSFLGMEACGIHETTYNSI 506
E LFQPS LG + GIHE+ + SI
Sbjct: 2304 EPLFQPSLLGRDIDGIHESIFKSI 2327
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 128 bits (310), Expect = 3e-30
Identities = 53/84 (63%), Positives = 74/84 (88%)
Frame = +1
Query: 4 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 183
NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+
Sbjct: 141 NREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHS 200
Query: 184 ILRLDLAGRDLTDYLMKILTERGY 255
I+R D+AGRD++ YL +L + G+
Sbjct: 201 IMRTDIAGRDVSRYLRLLLRKEGH 224
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 120 bits (289), Expect = 1e-27
Identities = 51/84 (60%), Positives = 67/84 (79%)
Frame = +1
Query: 4 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 183
NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH
Sbjct: 119 NREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHL 178
Query: 184 ILRLDLAGRDLTDYLMKILTERGY 255
RLD+AGRD+T YL+K++ RGY
Sbjct: 179 TRRLDIAGRDITKYLIKLMLLRGY 202
Score = 85.0 bits (201), Expect = 5e-17
Identities = 39/87 (44%), Positives = 55/87 (63%)
Frame = +3
Query: 255 SFTTTAEREIVRDINEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 434
+F TA+ E VR + EKLCYV + EQE A ++ L + Y LPDG+V+ + ERF P
Sbjct: 203 AFNHTADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAP 262
Query: 435 EALFQPSFLGMEACGIHETTYNSIISA 515
EALFQP + +E G+ E +N+I +A
Sbjct: 263 EALFQPHLINVEGVGVAELLFNTIQAA 289
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 532 DLYANTVLSGGTTMYPGIADRMQKEITAL 618
+ Y + VLSGG+TMYPG+ R+++EI L
Sbjct: 296 EFYKHIVLSGGSTMYPGLPSRLEREIKQL 324
Score = 35.5 bits (78), Expect = 0.043
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 535 LYANTVLSGGTTMYPGIADRMQKEITA-LAPSTMKIKIIAPPERKYSVWIGGSILASL 705
LY VL G T+ Q +TA KI+I PP RK+ V++GG++LA +
Sbjct: 324 LYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADI 381
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 107 bits (257), Expect = 9e-24
Identities = 49/60 (81%), Positives = 56/60 (93%)
Frame = +1
Query: 532 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 711
DLY+N VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSILASLST
Sbjct: 66 DLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLST 125
Score = 92.3 bits (219), Expect = 4e-19
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +3
Query: 351 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSII 509
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN I+
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIM 57
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 81.0 bits (191), Expect = 9e-16
Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Frame = +1
Query: 7 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 186
REK+T++MFE +N PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI
Sbjct: 49 REKLTELMFEKYNVPAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAI 108
Query: 187 LRLDLAGRDLTDYLMKILTERGYRSLPP--PSGKSFVTSMRSCATSLLTSS 333
+R LAG +T ++ E +PP + K S T ++T+S
Sbjct: 109 VRSPLAGDFITAQCRQMFEETNVEVIPPYMVASKGIEGSTAMGVTQVVTTS 159
Score = 53.6 bits (123), Expect = 2e-07
Identities = 22/60 (36%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +1
Query: 535 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGGSILASL 705
L+ + +++GG T+ G +R+ +E+ + P +M++K+I+ E++++ WIGGSILASL
Sbjct: 171 LFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIGGSILASL 230
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 61.7 bits (143), Expect = 6e-10
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Frame = +1
Query: 37 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 213
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 214 LTDYLMKILTERGYRSLPPPSGKSFVTSMRSCATSLLTSSRKWPPLHPAAPSRSLTNFPT 393
+T ++ ++L ER +PP +++ + K + P++ + + +
Sbjct: 98 ITFFVQQLLRER-EMGIPPEQSMETAKTIKERWGYICPDIAKEFAKYEQEPAKWIKKYES 156
Query: 394 VRSSLSETKDSVAQRLSSNPRSWVWK 471
+ + ++ + P W+ K
Sbjct: 157 INAVTTKILLRQFAKYEQEPAKWIKK 182
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 16/72 (22%)
Frame = +1
Query: 535 LYANTVLSGGTTMYPGIADRMQKEIT----------------ALAPSTMKIKIIAPPERK 666
LY N VLSGG+TM+ R+Q++I + P ++ ++I+ ++
Sbjct: 242 LYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQR 301
Query: 667 YSVWIGGSILAS 702
Y+VW GGS+LAS
Sbjct: 302 YAVWFGGSMLAS 313
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 61.3 bits (142), Expect = 8e-10
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = +3
Query: 255 SFTTTAEREIVRDINEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 434
+FT+++ +IV DI EK+CY++ D +E+ ++ L K Y LPDGQ+I+IG E
Sbjct: 830 NFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECISSM 889
Query: 435 EALFQPSFL 461
E LF+P L
Sbjct: 890 EPLFRPDLL 898
Score = 56.4 bits (130), Expect = 2e-08
Identities = 35/109 (32%), Positives = 51/109 (46%)
Frame = +1
Query: 70 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 249
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L ++
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 250 GYRSLPPPSGKSFVTSMRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTV 396
+ SG V ++ L K +H + LT F T+
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLK--EVHNYKTNEGLTKFYTL 873
>SB_30755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 906
Score = 36.7 bits (81), Expect = 0.019
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +1
Query: 310 ATSLLTSSRKWPPL--HPAAPSRSLTNFP---TVRSSLSETKDSVAQRLSSNPRSWVWKL 474
+TS +T S K+PP+ +PA PS L P TV SLS T S+P S V L
Sbjct: 452 STSSITGSSKYPPVSPNPAKPSNILFEGPSSSTVFKSLSPTDQMSNSPSQSSPGSSVSDL 511
Query: 475 AASTRPHITPS*VRRG 522
+ S+ P++ + V G
Sbjct: 512 SCSSDPNVIRTYVIEG 527
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 36.3 bits (80), Expect = 0.025
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Frame = +1
Query: 535 LYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIAPP-ERKYSVWIGG 687
L N VL GGT M PG R+ +EI L S +K+ PP + W+GG
Sbjct: 77 LAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPVNANITAWLGG 136
Query: 688 SILASL 705
+I SL
Sbjct: 137 AIFGSL 142
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 35.1 bits (77), Expect = 0.057
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 50 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTKDTHSPTPSC 190
P CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1518 PVGCSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 50 PPCTSPSKPCSRCTRPVVPPVSC 118
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.7 bits (76), Expect = 0.075
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +1
Query: 10 EKMTQIMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYA 171
+ M +I+FE +N A+ A LS Y S +V+D+G +H VP++ G
Sbjct: 319 DAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKV 378
Query: 172 LPHAILR 192
+ A+ R
Sbjct: 379 IKKAVRR 385
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 34.3 bits (75), Expect = 0.100
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 187
P + HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 57 PSTPCTHSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 31.9 bits (69), Expect = 0.53
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCT-----RPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 184
P + S ST ++PS PC+ T P P C TP+T S PST T S TP
Sbjct: 42 PSTPSTPSTPITPSTPSTPCTHSTPSAPSTPSTPSTPC-TPSTPSTPSTPSTPSTPS-TP 99
Query: 185 S 187
S
Sbjct: 100 S 100
Score = 31.1 bits (67), Expect = 0.93
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCT--RPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 187
P + S ST +PS PC+ T P P P + TP+T S T PST T S TPS
Sbjct: 407 PSTPSTPSTPITPRTPSTPCTHSTPGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPS-TPS 465
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 29 CSKHSTRPPCT--SPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTKDTHSPTPS 187
C+ + P T +PS P + CT P + TP+T S TPC PST T S TPS
Sbjct: 40 CTPSTPSTPSTPITPSTPSTPCTHST--PSAPSTPSTPS-TPCTPSTPSTPS-TPS 91
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +2
Query: 35 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSP--TPS 187
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 187
P + S ST +PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 18 PSTPSTPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/56 (42%), Positives = 29/56 (51%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
P + S STR ++PS P + T P P TP+T S T PST T S TPS
Sbjct: 640 PSTPSTPSTRSTPSTPSTPSTPST-PSTPS----TPSTPSLTHTPSTPSTPS-TPS 689
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
P + S ST ++PS P + CT P P TP+T S PST T S TPS
Sbjct: 252 PSTPSMPSTPSTPSTPSTPSTPCT-PNTPS----TPSTPSMPSTPSTPSTPS-TPS 301
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
P + S ST ++PS P + CT P P TP+T S PST T S TPS
Sbjct: 802 PSTPSMPSTPSTPSTPSTPSTPCT-PNTPS----TPSTPSMPSTPSTPSTPS-TPS 851
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +2
Query: 59 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSPTP 184
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 34.3 bits (75), Expect = 0.100
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 50 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 187
P TSP + P +R P+ PP C + V PTP S+K + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.100
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 38 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 151
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +2
Query: 20 PRSCSKHST--RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 151
P+ C T PC SPS P + P C+T T+SP PC
Sbjct: 497 PKPCFTFLTLSTKPCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 20 PRSCSKHSTRP-PCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
P S + T P P T SP+ P P P + TP T +PT TK T + TP+
Sbjct: 44 PTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 44 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = +2
Query: 2 PTERR*PRSCSKHSTRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TK 163
PT + P + T+P P T+P+ KP P P + TP +P TP P+ T
Sbjct: 79 PTPKT-PTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTP 137
Query: 164 DTHSPT 181
H+PT
Sbjct: 138 TAHTPT 143
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +2
Query: 2 PTERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP- 178
PT + P + T+P T+P+ T P S P +PTP T T +P
Sbjct: 24 PTPTK-PTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPK 82
Query: 179 TPS 187
TP+
Sbjct: 83 TPT 85
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTKDTHSPTPS 187
P + ST P T+P+ T P + TP +P TP P+T PTP+
Sbjct: 39 PSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA 97
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 41 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 181
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 181
P + ++ + P +P+ P + P ++ TPAT TP T H+PT
Sbjct: 61 PTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTP-TPTKPTPTAHTPT 113
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 145
P + + + P +P+KP + P P + TP T +PT
Sbjct: 107 PTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Frame = +2
Query: 53 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 178
P T PC + CT+ +P +TP T TPC PST+ +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 29 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 151
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +2
Query: 53 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 151
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 32.3 bits (70), Expect = 0.40
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 106 TGIVLDSGDGVSHTVPI 156
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTKDTHSPTP 184
PR KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 200 PRPTYKHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 59 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
T+P+ P + T P P + TP T + TP +P P+
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 47 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHS 175
+PP T+PSK T P+ P++ TP T T +TK T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 432 PEALFQPSFLGMEACGIHET 491
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 31.9 bits (69), Expect = 0.53
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTP 184
P + H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 131 PCTTKPHTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTPSCV 193
PR+ H+T+P T P T+P P T P T P T H+ P +
Sbjct: 36 PRTTKPHTTKPHTTKPHTIKPHTTKPHTTKPHTTKPHTTKPRTTKPQTTKPHTTKPHTI 94
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTP 184
P++ H+ +P T P R T+P P + T PT P T H+ P
Sbjct: 101 PKTTKPHTNKPYTTKPRTTKPRTTKPHTTKPCTTKPHTTKPPTTKPQTTKPHTTKP 156
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS-PTPCPSTKDTHSPTP 184
PR+ H+T+P T P T+P P T PT P T H+ P
Sbjct: 121 PRTTKPHTTKPCTTKPHTTKPPTTKPQTTKPHTTKPRTTKPPTTKPHTTKPHTTKP 176
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 1 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 117
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18)
Length = 1023
Score = 31.5 bits (68), Expect = 0.70
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
P+ C+ + PP KPC + + +V PV+ P TPCP+ + PTPS
Sbjct: 807 PQDCAAGTYSPPGFGTCKPC-QSGKKLVNPVN---PGATYCTPCPA--GSSCPTPS 856
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/64 (21%), Positives = 27/64 (42%)
Frame = -1
Query: 206 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNM 27
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 26 IWVI 15
+I
Sbjct: 153 YHII 156
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 206 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 69
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 206 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 69
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 20 PRSCSKHST-RPPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTP 184
P+ + ST PP T P+ P S P VP + P V+P P + PTP
Sbjct: 321 PQMVAPSSTVTPPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/64 (40%), Positives = 29/64 (45%)
Frame = +3
Query: 60 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 239
RR S A R RS R R+ RRR RR R+P H S SRSR R P
Sbjct: 211 RRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRH 269
Query: 240 HRAR 251
R+R
Sbjct: 270 SRSR 273
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 59 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 163
+SP KP T+PVVP P+ + P P PS+K
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_53874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +1
Query: 352 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*VRRGHP 528
HP SR +N P V S + V R+ SN V+ S PH+ S V+ HP
Sbjct: 3 HPHVYSRVRSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHVY-SRVKSNHP 59
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +1
Query: 352 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*VRRGHP 528
HP SR +N P V S + V R+ SN V+ S PH+ S V+ HP
Sbjct: 36 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHVY-SRVKSNHP 92
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +1
Query: 352 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*VRRGHP 528
HP SR +N P V S + V R+ SN V+ S PH+ S V+ HP
Sbjct: 69 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHVY-SRVKSNHP 125
>SB_12796| Best HMM Match : Radical_SAM (HMM E-Value=8.9e-24)
Length = 676
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +1
Query: 352 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*VRRGHP 528
HP SR +N P V S + V R+ SN V+ S PH+ S V+ HP
Sbjct: 351 HPHVYSRVKSNHPHVYSRVRRNHSHVYSRVKSN-HPHVYSRVKSNHPHVY-SRVKSNHP 407
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +1
Query: 352 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*VRRGHP 528
HP SR +N P V S + V R+ SN V+ S PH+ S V+ HP
Sbjct: 505 HPHVYSRVRSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHVY-SRVKSNHP 561
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +1
Query: 352 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*VRRGHP 528
HP SR +N P V S + V R+ SN V+ S PH+ S V+ HP
Sbjct: 538 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHVY-SRVKSNHP 594
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +1
Query: 352 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*VRRGHP 528
HP SR +N P V S + V R+ SN V+ S PH+ S V+ HP
Sbjct: 571 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVKSNHPHVY-SRVKSNHP 627
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +1
Query: 352 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*VRRGHP 528
HP SR +N P V S + V R+ N S V+ S PH+ S V+ HP
Sbjct: 340 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVRRN-HSHVYSRVKSNHPHVY-SRVKSNHP 396
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +1
Query: 352 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*VRRGHP 528
HP SR +N P V S + V R+ SN V+ S PH+ S V+ HP
Sbjct: 494 HPHVYSRVKSNHPHVYSRVRSNHPHVYSRVKSN-HPHVYSRVKSNHPHVY-SRVKSNHP 550
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 352 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*VRRGHP 528
HP SR N P V S + V R+ SN V+ S PH+ S V+ HP
Sbjct: 483 HPHVYSRVRRNHPHVYSRVKSNHPHVYSRVRSN-HPHVYSRVKSNHPHVY-SRVKSNHP 539
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +1
Query: 352 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*VRRGHP 528
HP SR +N P V S + V R+ SN V+ PH+ S V+ HP
Sbjct: 384 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSN-HPHVYSRVRRNHPHVY-SRVKSNHP 440
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +1
Query: 352 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*VRRGHP 528
HP S+ +N P V S + V R+ SN V+ S PH+ S V+ HP
Sbjct: 472 HPHVYSQVKSNHPHVYSRVRRNHPHVYSRVKSN-HPHVYSRVRSNHPHVY-SRVKSNHP 528
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +1
Query: 352 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*VRRGHP 528
HP SR +N P V S + V R+ SN V+ PH+ S V+ HP
Sbjct: 428 HPHVYSRVKSNHPHVYSRVRRNHPHVYSRVKSN-HPHVYSRVRRNHPHVY-SQVKSNHP 484
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 38 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 41 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 38 HSTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
++T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 66 NTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPT 118
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 41 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPT-PCPSTKD-THSPTPSCVWT*P 205
+T P T+P+KP + T P + PAT +PT P +T T +PT S T P
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP 182
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 41 STRPPC-TSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
+T PP T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 52 TTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 41 STRPPCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.6
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 65 PSKPCSRCTRPVVPP 109
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
PR S + P P KP + P PP P+T P P P D P+
Sbjct: 1044 PRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPPSTSQPVPPPRQPDPIPTNPA 1099
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 7 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 117
+E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 543 KEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 579
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +2
Query: 2 PTERR*PRSCSKHSTRPPCTSPSKPCSRCT-RPVVPPVSCWTPATVSPTPCPSTKDTHSP 178
PT + +S P SPS P RP PP+ P + TP P + T P
Sbjct: 570 PTSPSYSPTSPSYSPSSPSYSPSSPSFHHNLRPTPPPLPLSIPLLLQATP-PHLQSTAQP 628
Query: 179 TPSCV 193
P+ V
Sbjct: 629 RPTTV 633
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +2
Query: 53 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 151
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 53 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 157
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 24 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIR 170
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTP 184
PR+ + +T P T+P R T PV TP T +P T P T + TP
Sbjct: 171 PRTTTPETTTPETTTP-----RTTTPVTTTPRTTTPETTTPETTTPRTTTPETTTP 221
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 181
P + + +T P T+P R T P T A +P P +H+P+
Sbjct: 191 PVTTTPRTTTPETTTPETTTPRTTTPETTTPKKTTAAKKAPLPVTHATTSHAPS 244
>SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 329
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 362 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 448
LPR ++R HY++ +PLPRG P
Sbjct: 132 LPRGGSPLTKRRESHYQEEGVPLPRGGSP 160
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 362 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 448
LPR ++R HY++ +PLPRG P
Sbjct: 154 LPRGGSPLTKRRESHYQEEGVPLPRGGGP 182
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 86 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 29.1 bits (62), Expect = 3.7
Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 9/138 (6%)
Frame = +1
Query: 268 PPSGKSFVTSMRSCATSLLTSSRKWPPL-------HPAAPSRSLTNFPTVRSSLSETKDS 426
PP ++ V S + A +L ++ W PAAPS T PTV++++ T
Sbjct: 502 PPVAQTTVPSQETTAQQMLKAAAAWQQATGQTLQYQPAAPSAYQTQQPTVQATVQATGQ- 560
Query: 427 VAQRLSSNPRSWVWKLA--ASTRPHITPS*VRRGHP*DLYANTVLSGGTTMYPGIADRMQ 600
Q +++ P++ V LA A +P P + Y + TT
Sbjct: 561 --QEVATEPQT-VQPLATGAYQQPTTQPE-TGNQYQAGYYGGQQMQDSTTASTAAQQYTT 616
Query: 601 KEITALAPSTMKIKIIAP 654
+ AP+T +AP
Sbjct: 617 QSAPTAAPATEPQATVAP 634
>SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14)
Length = 829
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -2
Query: 607 FPFAYGRRFQGTWWYHRTIRCWRTSLTDVHVALMMELYVVSWMPQAS 467
FP RF+ + +R ++ W LTD +A M+ + V++ + QAS
Sbjct: 2 FPIEQLARFEASNSAYRLLKPWWDVLTDYLIAAMLVVAVLAGLMQAS 48
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 304 SCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSV 429
SCA S+ + L PA+P+ S++ F T++ T+ S+
Sbjct: 970 SCAEPRSIDSKHYTALSPASPASSISCFSTLQLKQMPTRSSI 1011
>SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0)
Length = 603
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 368 REVLRTSRRSGHHYRKRKIPLPR--GSLPTLVLGYGSLRHPR 487
R++LR R HHYR+ + R G++P + Y + R PR
Sbjct: 521 RDLLRALRNKKHHYRELPDEVKRSLGTIPDEYVRYFTSRFPR 562
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 47 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 184
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 400 SSLSETKDSVAQRLSSNPRSWVWK 471
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 59 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 196
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5)
Length = 737
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +1
Query: 364 PSRSLTNFPTVRSS----LSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*VRRGHP* 531
PS ++T++P++ +S + V + N V ++AS P++T + R +
Sbjct: 150 PSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATRLVPSISASISPNVTINMTREANST 209
Query: 532 DLYANTVLSGGTTMYPGIADRMQKEITALAPS 627
+ +T + TT+ PG + T ++PS
Sbjct: 210 MILPSTSVPYNTTLIPG-PNATSTAATTMSPS 240
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 89 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 193
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_55120| Best HMM Match : DUF854 (HMM E-Value=8.5)
Length = 327
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -2
Query: 607 FPFAYGRRFQGTWWYHRTIRCWRTSLTDVHVALMMELYVVSWMPQAS 467
FP RF+ + +R ++ W LTD +A M+ + V++ + QAS
Sbjct: 2 FPIEQLARFEASNSAYRLLKPWWDVLTDYLIAAMLVVAVLAGLMQAS 48
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +2
Query: 65 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PV 208
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 35 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 187
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 39 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRC---LPHRAHLRRIRT-PPRHPASGLSR 206
I H++ RH S+ L R R HR + RR + H ++L R R P ++ +
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRPRNWVPPFNSTAMIF 1647
Query: 207 SRPH 218
+PH
Sbjct: 1648 GKPH 1651
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 62 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 184
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 723
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -2
Query: 607 FPFAYGRRFQGTWWYHRTIRCWRTSLTDVHVALMMELYVVSWMPQAS 467
FP RF+ + +R ++ W LTD +A M+ + V++ + QAS
Sbjct: 2 FPIEQLARFEASNSAYRLLKPWWDVLTDYLIAAMLVVAVLAGLMQAS 48
>SB_59762| Best HMM Match : Vicilin_N (HMM E-Value=4)
Length = 206
Score = 28.3 bits (60), Expect = 6.5
Identities = 32/118 (27%), Positives = 39/118 (33%)
Frame = +3
Query: 45 HARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRL 224
H H R + AL + R R+R + R HL+R R RP L
Sbjct: 40 HTSHKRPLTAYALTSKTSKMKAKRRISRKRIITARKHLQRTRGGEEQNNEEERSRRPRVL 99
Query: 225 PHEDPHRARLSFTTTAEREIVRDINEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 398
E R R E + VR Y L EQ + S YEL D Q
Sbjct: 100 TEEQRARQRQRDLVLTEEQRVRKRQTSSEY-RLSGEQRVRKKQKDS----KYELDDEQ 152
>SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 184
P S S S P SP P S P P S ++P+ SP+ S+ SP P
Sbjct: 4 PDSPSPSSPSPDSPSPDSPSSYSPSPDSP--SSYSPSLDSPSSYSSSSYLPSPDP 56
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 544 NTVLSGGTTMYPGIADRMQKEITALAP 624
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 86 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 205
CT P ++ P T + T P TK P PS + T P
Sbjct: 150 CTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPP 189
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 6.5
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 18 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRH 185
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 141 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPHRARLSFTTTA 272
PHR + RTP H + RPH P PHR + T T+
Sbjct: 139 PHRPNTDPTRTPHGPHTDPTWTPHRPHMDPTRTPHRPHMDPTRTS 183
>SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05)
Length = 1960
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Frame = +1
Query: 364 PSRSLTNFPTVRSS----LSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*VRRGHP* 531
PS ++T++P++ +S + V + N V ++AS P++T R +
Sbjct: 1446 PSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATRLVPSISASISPNVTIDMTREANST 1505
Query: 532 DLYANTVLSGGTTMYPGIADRMQKEITALAPS 627
+ +T + TT+ PG + T ++PS
Sbjct: 1506 MILPSTSVPYNTTLIPG-PNATSTAATTMSPS 1536
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Frame = +1
Query: 364 PSRSLTNFPTVRSS----LSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*VRRGHP* 531
PS ++T++P + +S + V + N V ++AS P++T + R +
Sbjct: 1245 PSPNITSYPLLTTSAVGNFTSATSVVFDSTTPNATRLVPSISASISPNVTINMTREANST 1304
Query: 532 DLYANTVLSGGTTMYPGIADRMQKEITALAPS 627
+ +T + TT+ PG + T ++PS
Sbjct: 1305 MILPSTSVPYNTTLIPG-PNATSTAATTMSPS 1335
>SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21)
Length = 226
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 29 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS--CWTPATVSPTPCPSTKDTHSPT 181
C +H T K C C + PP+ T T +PT P TK T +PT
Sbjct: 167 CRRHKTYMNIYC-RKSCGFCGKAPHPPIQEPPVTKTTTAPTEPPVTKTTTAPT 218
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 30 VRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRC-LPHRAHLRRIRTPPRHPASGLSR 206
+RN+ ++ R H +RV+S + R+ R R P R R R+P R P SR
Sbjct: 431 IRNLDDSKF-RSHEGETSYIRVKSDLQSRSHSRSRSPSPRRRSRSRSRSPRRRP-KSYSR 488
Query: 207 SRPHRLPHEDPHRARLS 257
S P P ++R S
Sbjct: 489 S-PSGSPRRSRSKSRSS 504
>SB_40264| Best HMM Match : DUF667 (HMM E-Value=0)
Length = 2074
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Frame = +1
Query: 238 LTERGYRSLPPPSGKSFV----TSMRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSS 405
L R LPPPS + T T + SR P H PSR ++ S+
Sbjct: 227 LHAREAAGLPPPSTPTISEMDSTKQEERQTHIAFGSRVAIPKHARKPSREGSSVGRSSSN 286
Query: 406 LSETKDSVAQRLSSNP 453
+ SV Q SS+P
Sbjct: 287 MLNRSSSVTQLRSSSP 302
>SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009)
Length = 888
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +3
Query: 99 SYHRYRAGLRRRCLPHRAH-LRRIRTPPRHPASGLSRSRPHRLPHEDPHRARLSFTTTAE 275
S HR + R+C P+R H + +RT P++ S R H H RL + T
Sbjct: 742 SAHRTDSTQHRQCAPYRLHPAQTVRTVQTLPSTD-SAHRTHSTQHRQCAPYRL-YPTQTV 799
Query: 276 REIVRDIN 299
R + +D N
Sbjct: 800 RIVQKDPN 807
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 26 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT-VSPTPCPSTKDTHSPTPS 187
+C+ T P +P+ + T P + +TP T +PTP + +++PTPS
Sbjct: 39 TCTTSYTPTPSYTPTPSYTPTTS--YTPTTSYTPTTSYTPTPSYTPTTSYTPTPS 91
>SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6)
Length = 237
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPA-TVSPTPCPSTKDTHSPTP 184
P + H+T +P P S P + +TPA TV P +++ T SP P
Sbjct: 63 PAQQAPHTTAASQPAPYTPASGQPASYTPAYTPYTPASTVGRMPPTTSQSTPSPAP 118
>SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0)
Length = 893
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 398 LTVGKFVRLLEGAAGCSGGHF 336
+TVGK + L+ G AG GHF
Sbjct: 366 MTVGKLIELIAGKAGVLEGHF 386
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = +3
Query: 42 QHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPH 218
Q RRHP R R+ + G+R R P +RR RT R + R R H
Sbjct: 356 QRGERERRHPPGVAICRYRTRQVSQRGVRERRNPPGVAIRRYRT--RQVSQRGERERRH 412
>SB_50187| Best HMM Match : SAM_1 (HMM E-Value=3.1e-21)
Length = 239
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 252 LSFTTTAEREIVRDINEKLCYVALDFEQEMATAASSSSLE 371
LS + E++ +NEK+C L EQE A++ +S+E
Sbjct: 47 LSNARSITHEVIWLLNEKVCQPPLTEEQEFRIASALASVE 86
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 23 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 157
R S++ TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 467 RPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 517
>SB_41475| Best HMM Match : HSA (HMM E-Value=7.5)
Length = 195
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/76 (25%), Positives = 25/76 (32%)
Frame = +3
Query: 27 HVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSR 206
H + R H R RVR H YR HR H R+ + +
Sbjct: 119 HEYRVHRVHEYRVH--RVHEYRVRRVHEYRVHRVHEYRVHRVHEYRVHRVHEYRVHRVHE 176
Query: 207 SRPHRLPHEDPHRARL 254
R HR+ HR +
Sbjct: 177 YRVHRVHEYRVHRVHV 192
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 32 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTK 163
S+ ST+ P T KP + RP+ P + P + P P T+
Sbjct: 252 SQVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRTE 295
>SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 23 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 157
R S++ TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 64 RPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 114
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 35 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 190
KH T PP S + P P+S TP+ SP S+ +HS +C
Sbjct: 2062 KHHT-PPSAHSYGTSSYDSSPQKLPISYLTPSPESPKDWSSSPSSHSDWSNC 2112
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +2
Query: 20 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 181
P + + +T P T+P R T P T A +P P +H+P+
Sbjct: 1792 PETTTPETTTPRTTTPETTKPRTTTPKTTTPKKTTAAKKAPLPVTHATTSHAPS 1845
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 50 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 148
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +2
Query: 50 PPCTSPSKPCSRCTRPVVPPVSCWTP-ATVSPTPCPSTKDTHSPT 181
PP T+P P P + T AT PT P+T T PT
Sbjct: 1 PPVTTPVPTTESTAVPTTAPTTEQTTVATTIPTTIPTTVPTTEPT 45
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 300 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 437
EK+ L+ E E A ++ LEK +L + +G+ER RC +
Sbjct: 2984 EKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/69 (37%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Frame = +3
Query: 60 RRHPSRA-LAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHED 236
RRH R L R HR R L R R H RR R R P R R HR
Sbjct: 156 RRHTRRPRLHTRRPRLHRRRTRLHTR--RPRLHTRRPRLHRRRPRLHTRRPRRHR-RRPR 212
Query: 237 PHRARLSFT 263
HR L +T
Sbjct: 213 LHRHDLDYT 221
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 71 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 190
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08)
Length = 1201
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 23 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 157
R S++ TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 510 RPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 560
>SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12)
Length = 1067
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 23 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 157
R S++ TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 434 RPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 484
>SB_31091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 165 IRTPPRHPASGLSRSRPHRLPHEDPHRARLSFTT-TAEREIVRDINEK 305
I+ PR + S S P ++PH+ PHRA T A+R I +I ++
Sbjct: 380 IKEEPRDESECSSESAP-QVPHKGPHRAHSRPTVLDAKRLIAAEIGQQ 426
>SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097)
Length = 812
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 23 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 157
R S++ TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 568 RPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 618
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/70 (30%), Positives = 26/70 (37%)
Frame = +3
Query: 21 PDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGL 200
PDH + R P L V R+ + GL +R PH T P HP
Sbjct: 333 PDHPLGLSK----RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGLSKSTAPDHPHGVS 388
Query: 201 SRSRPHRLPH 230
R+ P PH
Sbjct: 389 KRTAPDH-PH 397
>SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07)
Length = 493
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Frame = +2
Query: 23 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 157
R H TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 65 RRAPTHKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 115
>SB_15371| Best HMM Match : Keratin_B2 (HMM E-Value=1.2)
Length = 223
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 23 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 157
R S++ TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 127 RPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 177
>SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4)
Length = 781
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 53 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 199
P +P+ P S+ T PP+ TP + TP P+ + + P T
Sbjct: 19 PAPTPTTPTSQATTASGPPII--TPIPLKETPTPALESAPAAMPDATDT 65
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 23 RSCSKHSTRPPCTSPSKPCSR-----CTRPVVP-PVSCWTPATVSPTPCPS 157
R S++ TRP TSP+ +R CT+P V+C P + P PS
Sbjct: 491 RPASQNKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPS 541
>SB_7700| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.045)
Length = 377
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Frame = +3
Query: 153 HLRRIRTPPRHPASGLSRSRP---HRLPHEDPHRARLSFTTTAERE-IVRDINEKLCYV 317
H R+ P P S P HR P E H L+ T ++E +V+ +K+C V
Sbjct: 318 HAERMNIPQLTPTKHSSTPTPIQTHRKPQERIHNVLLTKTEAQKKEALVKHTEKKVCPV 376
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,076,124
Number of Sequences: 59808
Number of extensions: 646972
Number of successful extensions: 3313
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 2569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3226
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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