Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30440
(471 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 141 6e-33
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 135 5e-31
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 115 5e-25
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 112 3e-24
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 112 4e-24
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 110 1e-23
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 101 1e-20
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 95 5e-19
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 95 9e-19
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 84 1e-15
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 73 4e-12
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 69 5e-11
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 65 6e-10
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 59 4e-08
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 56 4e-07
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 55 9e-07
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 54 2e-06
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 52 6e-06
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 52 8e-06
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 51 1e-05
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 47 2e-04
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 44 0.001
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 42 0.005
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 42 0.009
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 41 0.012
UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa s... 40 0.021
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 39 0.048
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 39 0.048
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 39 0.064
UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11; Epsilo... 39 0.064
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 37 0.26
UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14; Campyl... 37 0.26
UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;... 34 1.4
UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12; Bacter... 34 1.8
UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex... 34 1.8
UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candida... 33 2.4
UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit... 33 2.4
UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6; Bacteri... 33 2.4
UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8; Gammapr... 33 4.2
UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130; Bacte... 33 4.2
UniRef50_Q7VK73 Cluster: UvrABC system protein C; n=1; Helicobac... 32 5.5
UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1; Thiomic... 32 5.5
UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast ... 32 5.5
UniRef50_P16180 Cluster: 30S ribosomal protein S17, chloroplast ... 32 5.5
UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofund... 32 7.3
UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1; ... 31 9.7
UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of str... 31 9.7
UniRef50_Q58469 Cluster: Uncharacterized glycosyltransferase MJ1... 31 9.7
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 141 bits (342), Expect = 6e-33
Identities = 70/84 (83%), Positives = 73/84 (86%)
Frame = +3
Query: 3 TEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSXRG 182
TEKAFQKQ VFL K K K +R +K+VGLGFKTPREAIEGTYIDKKCPFTGNVS RG
Sbjct: 48 TEKAFQKQPHVFLASKVSSK-KPLRRYKSVGLGFKTPREAIEGTYIDKKCPFTGNVSIRG 106
Query: 183 RILTGVVQKMKMQRTIVIRRDYLH 254
RILTGVVQKMKMQRTIVIRRDYLH
Sbjct: 107 RILTGVVQKMKMQRTIVIRRDYLH 130
Score = 105 bits (251), Expect = 6e-22
Identities = 45/51 (88%), Positives = 50/51 (98%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
++ KYNRFEKRH+NMSVHLSPCFRDVEIGD+VT+GECRPLSKTVRFNVLKV
Sbjct: 131 YVRKYNRFEKRHKNMSVHLSPCFRDVEIGDVVTVGECRPLSKTVRFNVLKV 181
Score = 54.4 bits (125), Expect = 1e-06
Identities = 26/43 (60%), Positives = 33/43 (76%), Gaps = 4/43 (9%)
Frame = +3
Query: 3 TEKAFQKQATVFLNRKGGM----KRKDMRHHKNVGLGFKTPRE 119
TE++FQKQ T+FLNRK G+ K +R+ +NVGLGFKTPRE
Sbjct: 5 TERSFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 135 bits (326), Expect = 5e-31
Identities = 65/89 (73%), Positives = 75/89 (84%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 TEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 167
TE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGN
Sbjct: 6 TERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGN 65
Query: 168 VSXRGRILTGVVQKMKMQRTIVIRRDYLH 254
VS RGRIL+GVV KMKMQRTIVIRRDYLH
Sbjct: 66 VSIRGRILSGVVTKMKMQRTIVIRRDYLH 94
Score = 104 bits (250), Expect = 9e-22
Identities = 45/51 (88%), Positives = 50/51 (98%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
++ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 95 YIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 115 bits (277), Expect = 5e-25
Identities = 55/87 (63%), Positives = 64/87 (73%)
Frame = +3
Query: 3 TEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSXRG 182
+E+AFQKQ +F N K ++ R +KN GLGFKTP+ AIEG+YIDKKCPFTG VS RG
Sbjct: 9 SERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRG 68
Query: 183 RILTGVVQKMKMQRTIVIRRDYLHTYP 263
+ILTG V KM RTIVIRR YLH P
Sbjct: 69 KILTGTVVSTKMHRTIVIRRAYLHYIP 95
Score = 88.2 bits (209), Expect = 8e-17
Identities = 36/51 (70%), Positives = 48/51 (94%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
++PKYNR+EKRH+N+ VH+SP FR V++GDIVT+G+CRP+SKTVRFNV+KV
Sbjct: 93 YIPKYNRYEKRHKNVPVHVSPAFR-VQVGDIVTVGQCRPISKTVRFNVVKV 142
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 112 bits (270), Expect = 3e-24
Identities = 55/87 (63%), Positives = 63/87 (72%)
Frame = +3
Query: 3 TEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSXRG 182
+E+AFQKQ +F N K G R R +K+VGLGFKTP EAI G Y+DKKCPF G VS RG
Sbjct: 9 SERAFQKQPHIFQNAKKGAGR---RWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIRG 65
Query: 183 RILTGVVQKMKMQRTIVIRRDYLHTYP 263
RILTG V KM RTI+IRR+YLH P
Sbjct: 66 RILTGTVVSTKMHRTIIIRREYLHFIP 92
Score = 83.8 bits (198), Expect = 2e-15
Identities = 34/50 (68%), Positives = 45/50 (90%)
Frame = +2
Query: 257 LPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
+PKYNR+EKRH+N++ H+SP FR + GD+VT+G+CRPLSKTVRFNVL+V
Sbjct: 91 IPKYNRYEKRHKNLAAHVSPAFR-INEGDVVTVGQCRPLSKTVRFNVLRV 139
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 112 bits (269), Expect = 4e-24
Identities = 56/89 (62%), Positives = 65/89 (73%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 TEKAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 167
TEKAF KQ VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCPFTG
Sbjct: 5 TEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGT 64
Query: 168 VSXRGRILTGVVQKMKMQRTIVIRRDYLH 254
VS RGRI+ G KM RTI++RR+YLH
Sbjct: 65 VSIRGRIIAGTCHSAKMNRTIIVRRNYLH 93
Score = 71.7 bits (168), Expect = 7e-12
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +2
Query: 272 RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 124 RYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 167
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 110 bits (265), Expect = 1e-23
Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 EKAFQKQATVFLNRKGGMKRKD---MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSX 176
++AFQKQ +F N K + +K +R+ K VGLGFK P++AIEG YIDKKCPFTGNVS
Sbjct: 36 QRAFQKQEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNVSV 95
Query: 177 RGRILTGVVQKMKMQRTIVIRRDYLH 254
RG IL G+V KM RTI+IRRDYLH
Sbjct: 96 RGAILKGIVISTKMTRTIIIRRDYLH 121
Score = 83.0 bits (196), Expect = 3e-15
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
++ KYNR+EKRHRN+ VH+SP F V+ GDIV G+CRPLSKTVRFNVLKV
Sbjct: 122 YVAKYNRYEKRHRNVPVHISPAFGPVKEGDIVVCGQCRPLSKTVRFNVLKV 172
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 101 bits (241), Expect = 1e-20
Identities = 47/85 (55%), Positives = 64/85 (75%), Gaps = 5/85 (5%)
Frame = +3
Query: 15 FQKQATVFLNRKG----GMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSXRG 182
+QKQ +F+ +K +K+ D R+ + VGLG+KTP+ A+EGT++D KCPFTGNVS RG
Sbjct: 11 YQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGNVSIRG 70
Query: 183 RILTGVVQKM-KMQRTIVIRRDYLH 254
RIL GVV KM+RT+V+RR+YLH
Sbjct: 71 RILRGVVVSAGKMKRTVVVRRNYLH 95
Score = 78.6 bits (185), Expect = 6e-14
Identities = 36/51 (70%), Positives = 41/51 (80%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
++ KY R+EKRH N SVH SP DV+ GD VT+GECRPLSKTVRFNVLKV
Sbjct: 96 YIQKYKRYEKRHTNFSVHCSPAL-DVKEGDTVTVGECRPLSKTVRFNVLKV 145
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 95.5 bits (227), Expect = 5e-19
Identities = 43/71 (60%), Positives = 52/71 (73%)
Frame = +3
Query: 42 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSXRGRILTGVVQKMKMQ 221
N +G K R KN+GLGFKTPREAI+G Y+DKKCPFTG VS RGRIL + + +MQ
Sbjct: 31 NLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILVWYLPQCEMQ 90
Query: 222 RTIVIRRDYLH 254
TI++ RDYLH
Sbjct: 91 STIIVARDYLH 101
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 94.7 bits (225), Expect = 9e-19
Identities = 43/71 (60%), Positives = 52/71 (73%)
Frame = +3
Query: 42 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSXRGRILTGVVQKMKMQ 221
+RK K +R+ K +GLGFKTP +A+ G YID+KCPFT NV RGRIL GVV KM
Sbjct: 5 SRKHVNKSGHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMH 64
Query: 222 RTIVIRRDYLH 254
RTI+IRR+YLH
Sbjct: 65 RTIIIRRNYLH 75
Score = 68.5 bits (160), Expect = 7e-11
Identities = 29/50 (58%), Positives = 41/50 (82%)
Frame = +2
Query: 257 LPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
+ KY R++KRH++++VH SP F D + GD V IG+CRPLSKT+R+NVL+V
Sbjct: 77 IKKYQRYQKRHKSLAVHCSPAF-DPKQGDEVVIGQCRPLSKTIRYNVLEV 125
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 84.2 bits (199), Expect = 1e-15
Identities = 36/66 (54%), Positives = 45/66 (68%)
Frame = +3
Query: 57 MKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSXRGRILTGVVQKMKMQRTIVI 236
+ +K KN+G+G K P EAI Y DKKCPF G +S RGRIL G V KM+R+++I
Sbjct: 16 LTKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVII 75
Query: 237 RRDYLH 254
RRDYLH
Sbjct: 76 RRDYLH 81
Score = 81.0 bits (191), Expect = 1e-14
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +2
Query: 257 LPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
+ KY RFEKRH+N+ H SPCFR V+ GD+VTIG+CRPLSKT+RFNVL++
Sbjct: 83 ISKYKRFEKRHKNIPCHCSPCFR-VQEGDLVTIGQCRPLSKTIRFNVLRI 131
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 72.5 bits (170), Expect = 4e-12
Identities = 35/82 (42%), Positives = 47/82 (57%)
Frame = +3
Query: 9 KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSXRGRI 188
K F +Q V + + R GFK P A YIDKKCPFTG+V+ RGR+
Sbjct: 8 KVFPRQTGVCAKPYASHEEQPKRRVNAEVCGFKAPETAYTRQYIDKKCPFTGDVNVRGRL 67
Query: 189 LTGVVQKMKMQRTIVIRRDYLH 254
GVV+KMK ++TIV+ +Y+H
Sbjct: 68 FKGVVKKMKAEKTIVVVANYVH 89
Score = 56.8 bits (131), Expect = 2e-07
Identities = 24/41 (58%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +2
Query: 263 KYNRFEKRHRNMSVHLSPCFRD-VEIGDIVTIGECRPLSKT 382
KY R+ +RH N SVH+SPCF + +GD V GE RPLSKT
Sbjct: 93 KYKRYSRRHTNFSVHMSPCFEGMINVGDTVICGETRPLSKT 133
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 68.9 bits (161), Expect = 5e-11
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +2
Query: 257 LPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
L KYNRF KRH+N+ HLS ++GDIV I ECRP+SKTVRFNV+KV
Sbjct: 63 LKKYNRFVKRHKNIPAHLSNLLT-CKVGDIVIIAECRPISKTVRFNVIKV 111
Score = 56.8 bits (131), Expect = 2e-07
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +3
Query: 138 IDKKCPFTGNVSXRGRILTGVVQKMKMQRTIVIRRDYL 251
IDKKCPF G ++ RGRIL G V+K+KM+ T++IR DYL
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYL 60
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 65.3 bits (152), Expect = 6e-10
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +2
Query: 293 NMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
NMS+H S CFRDV IG IVT+GEC+PLSKTVRF + KV
Sbjct: 34 NMSIHFSTCFRDVHIGHIVTVGECQPLSKTVRFIMFKV 71
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 59.3 bits (137), Expect = 4e-08
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 403
++ K+ R+EKR R + HL C DV +GD V I ECRPLSKT+ F V++
Sbjct: 57 YMQKFERYEKRTRRYAAHLPSCIGDVNVGDSVRIMECRPLSKTITFCVIE 106
Score = 42.7 bits (96), Expect = 0.004
Identities = 14/37 (37%), Positives = 28/37 (75%)
Frame = +3
Query: 141 DKKCPFTGNVSXRGRILTGVVQKMKMQRTIVIRRDYL 251
D+ CPF G++ RG+I+ G + K+ MQ++I++ R+++
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHI 55
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 56.0 bits (129), Expect = 4e-07
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = +2
Query: 257 LPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 400
LPKY R+E R ++ +L C +D++ GD V IGE RPLSKT F VL
Sbjct: 55 LPKYERYELRRTRITAYLPECLKDIKEGDYVLIGETRPLSKTKHFVVL 102
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 54.8 bits (126), Expect = 9e-07
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +2
Query: 263 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
KYNR+E+R + + HL C V+ GD+V IGE P+SKTV+F VL V
Sbjct: 65 KYNRYERRSKKIHAHLPDCI-SVKEGDVVVIGETMPISKTVKFTVLGV 111
Score = 37.1 bits (82), Expect = 0.19
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 141 DKKCPFTGNVSXRGRILTGVVQKMKMQRTIVIRRDYLH 254
D CP+ G + RG +L GVV K + +R +V++ YL+
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLY 61
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +3
Query: 69 DMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSXRGRILTGVVQKMKMQRTIVIRRDY 248
+ R K++GLG K PR + D CPF GN+ RG IL GVV +M +T+++ R+Y
Sbjct: 4 EYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREY 59
Score = 50.0 bits (114), Expect = 3e-05
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +2
Query: 263 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
KY R+E+R + H PC D + GD V I ECRPLSKT F V++V
Sbjct: 65 KYERWERRRSRIPAHNPPCI-DAQEGDKVRIAECRPLSKTKSFVVIEV 111
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 52.0 bits (119), Expect = 6e-06
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +2
Query: 257 LPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 382
+PKY+RF KR + H C D+ +GD VTI ECRPLSKT
Sbjct: 55 VPKYDRFMKRRSRVPAHAPDCL-DLAVGDTVTIAECRPLSKT 95
Score = 45.2 bits (102), Expect = 7e-04
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +3
Query: 90 VGLGFKTPREAIEGTYIDKKCPFTGNVSXRGRILTGVVQKMKMQRTIVIRRDY 248
+GL + P E T D+ CPF G +S RG+ L G V M++T+V+ R+Y
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREY 51
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 51.6 bits (118), Expect = 8e-06
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +2
Query: 260 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 400
PKY R+ ++ RN+ HL C + V +GD V IGE RPL+K + F VL
Sbjct: 87 PKYKRYIRKRRNIHAHLPSCIK-VNVGDYVVIGETRPLAKFISFVVL 132
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 51.2 bits (117), Expect = 1e-05
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +2
Query: 263 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 403
KY R+EKR + H C ++GDIVTI ECRP+SKT F V+K
Sbjct: 59 KYQRYEKRRSKIHAHNPACI-SAKVGDIVTIVECRPISKTKSFVVVK 104
Score = 47.2 bits (107), Expect = 2e-04
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +3
Query: 84 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSXRGRILTGVVQKMKMQRTIVIRRDYL 251
+++GL P E + Y CPF G + RG+IL G V KM T+VI R Y+
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYM 54
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 47.2 bits (107), Expect = 2e-04
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 400
++ KYNR+E+R + M V + C +V+ GD V I E RPLSKT+ + V+
Sbjct: 58 YIRKYNRYERRRKRMRVRVPECI-EVKPGDKVIIAETRPLSKTIAWVVI 105
Score = 33.9 bits (74), Expect = 1.8
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +3
Query: 84 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSXRGRILTGVVQKMKMQRTIVIRRDYLH 254
KN+G+ P ++ D CP+ G++ R ++L V+K++M + V+ ++LH
Sbjct: 4 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLH 57
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 44.4 bits (100), Expect = 0.001
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +3
Query: 84 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSXRGRILTGVVQKMKMQRTIVIRRDYLHTYP 263
+N+GL K P E D CP+ G +S RG++LTG V M ++ V+ R+Y P
Sbjct: 4 RNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQYIP 59
Score = 40.7 bits (91), Expect = 0.016
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 403
++PKY R + + VH+ C + ++ GD V ECR L+KT+ F +++
Sbjct: 57 YIPKYERKATKIKKYHVHVPDCIK-IKPGDTVRFAECRKLAKTISFVIVE 105
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 42.3 bits (95), Expect = 0.005
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = -2
Query: 263 WVGVKVIAADHDSSLHLHFLNDAGEDAAAXRNVTSEGTLLVNVGTLNRLSGSFE 102
W ++VI++D+D ++H N G+D + N TSE T VNV T N FE
Sbjct: 108 WNVMQVISSDNDGTVHFGGNNSTGQDFTSDGNSTSEWTFFVNVRTFNGSFWGFE 161
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 41.5 bits (93), Expect = 0.009
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 84 KNVGL-GFKTPREAIEGTYIDKKCPFTGNVSXRGRILTGVVQKMKMQRTIVIRR 242
+++G+ G K P E D +CPF G +S RG+IL G+V KM + IV++R
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKR 51
Score = 41.5 bits (93), Expect = 0.009
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 263 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 403
KY R ++ + + PC + +IGDI+TI ECRPL+K F V++
Sbjct: 59 KYQRKQRVSSKIHAYSPPCM-EAKIGDIITIAECRPLNKGSSFVVIE 104
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 41.1 bits (92), Expect = 0.012
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 263 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 400
KY R+E R + V + PC V+ GD V + E RPL+K+V F V+
Sbjct: 62 KYKRYEVRRKKKHVRVPPCI-PVKPGDEVIVAETRPLAKSVSFVVI 106
Score = 32.3 bits (70), Expect = 5.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 141 DKKCPFTGNVSXRGRILTGVVQKMKMQRTIVIRRDYLH 254
D CP+ G + RG++L V+K+KM V +YL+
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLY 58
>UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa sp.
PS|Rep: Ribosomal protein S17 - Beggiatoa sp. PS
Length = 100
Score = 40.3 bits (90), Expect = 0.021
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2
Query: 260 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 382
PKY ++ KR + VH ++GDIV I +CRP+SKT
Sbjct: 47 PKYGKYIKRSTKLHVHDEE--NTCQVGDIVAISQCRPISKT 85
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 39.1 bits (87), Expect = 0.048
Identities = 26/54 (48%), Positives = 31/54 (57%)
Frame = +2
Query: 242 RLPSHLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 403
RL H PKY++F ++ R H + EIGDIV I E R LSKT F VLK
Sbjct: 25 RLTKH-PKYHKFVRKTRRYHAHDEN--NECEIGDIVEIEESRKLSKTKAF-VLK 74
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 39.1 bits (87), Expect = 0.048
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +2
Query: 242 RLPSHLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
+L H P Y ++ KR + H + +IGD+V I E RPLSKT R+ V+++
Sbjct: 25 KLVQH-PLYKKYVKRTKKYHAHDER--NECKIGDVVEIEETRPLSKTKRWRVVRI 76
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 38.7 bits (86), Expect = 0.064
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 248 PSHLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
P + K+ R+ + + H+ P DV GD V ECRP++K+V F V++V
Sbjct: 56 PVYFTKFKRYARGRSRIHAHV-PSNIDVREGDRVLAAECRPVAKSVSFVVVEV 107
Score = 37.5 bits (83), Expect = 0.15
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 84 KNVGLGFKTP-REAIEGTYIDKKCPFTGNVSXRGRILTGVVQKMKMQRTIVIRRD 245
+ +GL P REA +G DK PF G + RG++ G + K + T+VI ++
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKE 54
>UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11;
Epsilonproteobacteria|Rep: 30S ribosomal protein S17 -
Wolinella succinogenes
Length = 88
Score = 38.7 bits (86), Expect = 0.064
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +2
Query: 260 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
PKY + KR + VH V++GD++ ECRPLSK F++ KV
Sbjct: 35 PKYRKIVKRFKKYIVHDES--NAVKVGDMIEAIECRPLSKRKSFSLHKV 81
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 36.7 bits (81), Expect = 0.26
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 272 RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
RF+KR + + H E+GD V I ECRP+SKT F +++V
Sbjct: 50 RFKKR-KKFNTHDEKNL--AEVGDFVKIAECRPISKTKHFRLVEV 91
>UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14;
Campylobacterales|Rep: 30S ribosomal protein S17 -
Campylobacter jejuni
Length = 83
Score = 36.7 bits (81), Expect = 0.26
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 260 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
P+Y + KR + +H +V++GD V ECRPLSK F + V
Sbjct: 31 PRYRKIVKRFKKYLIHDER--NEVKVGDTVVAVECRPLSKRKSFRLKSV 77
>UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 147
Score = 34.3 bits (75), Expect = 1.4
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 45 RKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSXRGRILTG 197
R G +R+D + H N G RE + GT+ K TG S G +TG
Sbjct: 39 RHGIARRRDAQQHGNTSHGHTAAREHVTGTHNSKGSHVTGTHSSTGTHVTG 89
>UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12;
Bacteria|Rep: 30S ribosomal protein S17 - Bdellovibrio
bacteriovorus
Length = 89
Score = 33.9 bits (74), Expect = 1.8
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +2
Query: 242 RLPSHLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
R+ H KY ++ K+ H +IGDIV I E RPLSKT R+ + +V
Sbjct: 32 RMVKHA-KYGKYVKKTSVFKAHDEK--NQAKIGDIVKIRETRPLSKTKRWALAEV 83
>UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S17 - Aquifex
aeolicus
Length = 107
Score = 33.9 bits (74), Expect = 1.8
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 290 RNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
++ H + +GDIV I E RPLSKT R+ V+K+
Sbjct: 49 KSKKYHAHDEHNECRVGDIVMIRETRPLSKTKRWVVVKI 87
>UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candidatus
Portiera aleyrodidarum|Rep: 30S ribosomal protein S17 -
Candidatus Portiera aleyrodidarum
Length = 83
Score = 33.5 bits (73), Expect = 2.4
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 266 YNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
Y ++ KR + +SVH S EIGDIV E +SKT + ++K+
Sbjct: 36 YGKYIKRSKKLSVHDSK--NKAEIGDIVECAESLKISKTKSWILIKI 80
>UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit
S17; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S17 - Schizosaccharomyces
pombe (Fission yeast)
Length = 90
Score = 33.5 bits (73), Expect = 2.4
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 335 IGDIVTIGECRPLSKTVRFNVLKV 406
+GD VTI CRP S T RF ++K+
Sbjct: 51 VGDAVTIQPCRPRSATKRFEIIKI 74
>UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6;
Bacteria|Rep: 30S ribosomal protein S17 - Thermus
thermophilus
Length = 105
Score = 33.5 bits (73), Expect = 2.4
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 260 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
P Y + KR + H P ++GD+V I E RP+SK RF VL++
Sbjct: 30 PLYGKVIKRSKKYLAH-DP-EEKYKLGDVVEIIESRPISKRKRFRVLRL 76
>UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Blochmannia floridanus
Length = 85
Score = 32.7 bits (71), Expect = 4.2
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2
Query: 266 YNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 382
Y +F R + VH + +V GDIV I ECRP+SKT
Sbjct: 34 YKKFINRTTKIYVHDTNNISNV--GDIVEITECRPISKT 70
>UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130;
Bacteria|Rep: 30S ribosomal protein S17 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 89
Score = 32.7 bits (71), Expect = 4.2
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 338 GDIVTIGECRPLSKTVRFNVLKV 406
GD+V I ECRP+SKT + V KV
Sbjct: 60 GDLVEIEECRPISKTKSWRVAKV 82
>UniRef50_Q7VK73 Cluster: UvrABC system protein C; n=1; Helicobacter
hepaticus|Rep: UvrABC system protein C - Helicobacter
hepaticus
Length = 621
Score = 32.3 bits (70), Expect = 5.5
Identities = 21/90 (23%), Positives = 41/90 (45%)
Frame = -2
Query: 371 KVCIRRSLQYHQSPRP*SKATNARTYSCAVSRTYCIWVGVKVIAADHDSSLHLHFLNDAG 192
K CI Q H+ P P + +TY+ +++ + K + +S +H N
Sbjct: 174 KACIFH--QIHKCPAPCENKVSIQTYAQTIAQGIALIEDKKALLKILESKMHTLSHNLQF 231
Query: 191 EDAAAXRNVTSEGTLLVNVGTLNRLSGSFE 102
E+AA R+ + T + N ++ +SG ++
Sbjct: 232 EEAAIMRDRIQKITQMKNQSIIDMMSGDYD 261
>UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1;
Thiomicrospira crunogena XCL-2|Rep: 30S ribosomal
protein S17 - Thiomicrospira crunogena (strain XCL-2)
Length = 87
Score = 32.3 bits (70), Expect = 5.5
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 260 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
PKY +F ++ + H + +GD VTI EC P SK ++++ +
Sbjct: 35 PKYKKFVRKSTKVMAHDAD--NACGVGDRVTISECTPFSKRKTWSLVSI 81
>UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast
precursor; n=13; Magnoliophyta|Rep: 30S ribosomal
protein S17, chloroplast precursor - Zea mays (Maize)
Length = 132
Score = 32.3 bits (70), Expect = 5.5
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 242 RLPSHLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 391
RL H PKY R E+ + H P ++GD+V + RP+SKT F
Sbjct: 54 RLAPH-PKYKRRERIKKKYQAH-DPD-NQFKVGDVVELQPSRPISKTKHF 100
>UniRef50_P16180 Cluster: 30S ribosomal protein S17, chloroplast
precursor; n=3; cellular organisms|Rep: 30S ribosomal
protein S17, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 149
Score = 32.3 bits (70), Expect = 5.5
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +2
Query: 242 RLPSHLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
RL H PKY R + + H P ++GD+V + + RP+SKT F L V
Sbjct: 72 RLAPH-PKYKRRVRMKKKYQAH-DPD-NQFKVGDVVRLEKSRPISKTKSFVALPV 123
>UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ion transport protein -
Mariprofundus ferrooxydans PV-1
Length = 256
Score = 31.9 bits (69), Expect = 7.3
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 43 TGKVA*RGRTCVTIRMLV*ASKLPERRLRVPTLTRSVPSL 162
TG++A R +R+L + +PE RL V TL RS+PS+
Sbjct: 83 TGELAMLARLARLLRVLRLITAIPELRLIVATLMRSIPSM 122
>UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1;
Campylobacter upsaliensis RM3195|Rep: Putative
uncharacterized protein - Campylobacter upsaliensis
RM3195
Length = 342
Score = 31.5 bits (68), Expect = 9.7
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 6 EKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSXRG 182
EK Q + +N K+ +H + G+ + +E+I+ + DKK FTG + G
Sbjct: 9 EKIIFSQLSTLINGLDCSKQSLEQHKEQEGIVYVKDKESIQSSSTDKKISFTGKILNGG 67
>UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 232
Score = 31.5 bits (68), Expect = 9.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 338 GDIVTIGECRPLSKTVRFNVLKV 406
GD+V I +CRP+SKT F V ++
Sbjct: 64 GDVVRIEQCRPISKTKHFAVAEI 86
>UniRef50_Q58469 Cluster: Uncharacterized glycosyltransferase
MJ1069; n=2; Methanococcales|Rep: Uncharacterized
glycosyltransferase MJ1069 - Methanococcus jannaschii
Length = 392
Score = 31.5 bits (68), Expect = 9.7
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 209 NEDAENYRDPPRLPSHLPKYNRFEKRHRNMSVHLSPCF 322
+ED ENY D ++PKY FE RH N+ V+ P F
Sbjct: 32 SED-ENY-DIYIFAPNIPKYKEFEIRHNNVKVYRYPAF 67
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,286,986
Number of Sequences: 1657284
Number of extensions: 8492522
Number of successful extensions: 21173
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 20564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21148
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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