Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30440
         (471 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...   108   1e-25
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   7.1  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           22   9.4  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    22   9.4  

>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score =  108 bits (259), Expect = 1e-25
 Identities = 51/81 (62%), Positives = 64/81 (79%)
 Frame = +3

Query: 9   KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSXRGRI 188
           +AFQKQ  + LNRK   ++K +R H ++GLGFKTP+EAI GTYIDKKCPFTG++S RGRI
Sbjct: 8   RAFQKQLGINLNRKNVSRKKGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGHISIRGRI 67

Query: 189 LTGVVQKMKMQRTIVIRRDYL 251
           LTGVV+K  +   + IRRDYL
Sbjct: 68  LTGVVRKCIV--LLYIRRDYL 86



 Score = 91.9 bits (218), Expect = 1e-20
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = +2

Query: 263 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 403
           KY+ FEKR+RNM +HLSPCFRDVE GDIVT+GECRPLSKTVRFNVLK
Sbjct: 91  KYDTFEKRNRNMRLHLSPCFRDVEAGDIVTLGECRPLSKTVRFNVLK 137


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 243 DYLHTYPNTIGSRNGT 290
           DY+   P+TIG  +GT
Sbjct: 733 DYMRRNPSTIGQMSGT 748


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 71  HASP*ECWFRLQNSQRGD*GYLH 139
           H  P EC   + +S     GYLH
Sbjct: 82  HYEPMECHSAVNSSSNSSTGYLH 104


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 66  SSSCHLSCSGKRWPVS 19
           +SSC L  +G RW VS
Sbjct: 447 ASSCFLPEAGARWDVS 462


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,623
Number of Sequences: 2352
Number of extensions: 9675
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)