Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30440
(471 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 135 8e-32
BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 135 8e-32
BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 135 8e-32
BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 135 8e-32
BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 135 8e-32
BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 135 8e-32
BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 135 8e-32
BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 135 8e-32
AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 135 8e-32
AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 104 1e-22
AL359734-1|CAI41259.1| 277|Homo sapiens seven in absentia homol... 29 8.1
>X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for
ribosomal protein S11. ).
Length = 158
Score = 135 bits (326), Expect = 8e-32
Identities = 65/89 (73%), Positives = 75/89 (84%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 TEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 167
TE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGN
Sbjct: 6 TERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGN 65
Query: 168 VSXRGRILTGVVQKMKMQRTIVIRRDYLH 254
VS RGRIL+GVV KMKMQRTIVIRRDYLH
Sbjct: 66 VSIRGRILSGVVTKMKMQRTIVIRRDYLH 94
Score = 104 bits (250), Expect = 1e-22
Identities = 45/51 (88%), Positives = 50/51 (98%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
++ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 95 YIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 135 bits (326), Expect = 8e-32
Identities = 65/89 (73%), Positives = 75/89 (84%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 TEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 167
TE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGN
Sbjct: 6 TERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGN 65
Query: 168 VSXRGRILTGVVQKMKMQRTIVIRRDYLH 254
VS RGRIL+GVV KMKMQRTIVIRRDYLH
Sbjct: 66 VSIRGRILSGVVTKMKMQRTIVIRRDYLH 94
Score = 104 bits (250), Expect = 1e-22
Identities = 45/51 (88%), Positives = 50/51 (98%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
++ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 95 YIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 135 bits (326), Expect = 8e-32
Identities = 65/89 (73%), Positives = 75/89 (84%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 TEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 167
TE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGN
Sbjct: 6 TERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGN 65
Query: 168 VSXRGRILTGVVQKMKMQRTIVIRRDYLH 254
VS RGRIL+GVV KMKMQRTIVIRRDYLH
Sbjct: 66 VSIRGRILSGVVTKMKMQRTIVIRRDYLH 94
Score = 104 bits (250), Expect = 1e-22
Identities = 45/51 (88%), Positives = 50/51 (98%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
++ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 95 YIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 135 bits (326), Expect = 8e-32
Identities = 65/89 (73%), Positives = 75/89 (84%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 TEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 167
TE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGN
Sbjct: 6 TERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGN 65
Query: 168 VSXRGRILTGVVQKMKMQRTIVIRRDYLH 254
VS RGRIL+GVV KMKMQRTIVIRRDYLH
Sbjct: 66 VSIRGRILSGVVTKMKMQRTIVIRRDYLH 94
Score = 104 bits (250), Expect = 1e-22
Identities = 45/51 (88%), Positives = 50/51 (98%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
++ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 95 YIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 135 bits (326), Expect = 8e-32
Identities = 65/89 (73%), Positives = 75/89 (84%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 TEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 167
TE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGN
Sbjct: 6 TERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGN 65
Query: 168 VSXRGRILTGVVQKMKMQRTIVIRRDYLH 254
VS RGRIL+GVV KMKMQRTIVIRRDYLH
Sbjct: 66 VSIRGRILSGVVTKMKMQRTIVIRRDYLH 94
Score = 104 bits (250), Expect = 1e-22
Identities = 45/51 (88%), Positives = 50/51 (98%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
++ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 95 YIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 135 bits (326), Expect = 8e-32
Identities = 65/89 (73%), Positives = 75/89 (84%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 TEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 167
TE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGN
Sbjct: 6 TERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGN 65
Query: 168 VSXRGRILTGVVQKMKMQRTIVIRRDYLH 254
VS RGRIL+GVV KMKMQRTIVIRRDYLH
Sbjct: 66 VSIRGRILSGVVTKMKMQRTIVIRRDYLH 94
Score = 104 bits (250), Expect = 1e-22
Identities = 45/51 (88%), Positives = 50/51 (98%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
++ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 95 YIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 135 bits (326), Expect = 8e-32
Identities = 65/89 (73%), Positives = 75/89 (84%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 TEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 167
TE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGN
Sbjct: 6 TERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGN 65
Query: 168 VSXRGRILTGVVQKMKMQRTIVIRRDYLH 254
VS RGRIL+GVV KMKMQRTIVIRRDYLH
Sbjct: 66 VSIRGRILSGVVTKMKMQRTIVIRRDYLH 94
Score = 104 bits (250), Expect = 1e-22
Identities = 45/51 (88%), Positives = 50/51 (98%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
++ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 95 YIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 135 bits (326), Expect = 8e-32
Identities = 65/89 (73%), Positives = 75/89 (84%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 TEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 167
TE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGN
Sbjct: 6 TERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGN 65
Query: 168 VSXRGRILTGVVQKMKMQRTIVIRRDYLH 254
VS RGRIL+GVV KMKMQRTIVIRRDYLH
Sbjct: 66 VSIRGRILSGVVTKMKMQRTIVIRRDYLH 94
Score = 104 bits (250), Expect = 1e-22
Identities = 45/51 (88%), Positives = 50/51 (98%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
++ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 95 YIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
>AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 135 bits (326), Expect = 8e-32
Identities = 65/89 (73%), Positives = 75/89 (84%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 TEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 167
TE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGN
Sbjct: 6 TERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGN 65
Query: 168 VSXRGRILTGVVQKMKMQRTIVIRRDYLH 254
VS RGRIL+GVV KMKMQRTIVIRRDYLH
Sbjct: 66 VSIRGRILSGVVTKMKMQRTIVIRRDYLH 94
Score = 104 bits (250), Expect = 1e-22
Identities = 45/51 (88%), Positives = 50/51 (98%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
++ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 95 YIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 145
>AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11
protein.
Length = 83
Score = 104 bits (250), Expect = 1e-22
Identities = 45/51 (88%), Positives = 50/51 (98%)
Frame = +2
Query: 254 HLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
++ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 20 YIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKV 70
Score = 39.9 bits (89), Expect = 0.004
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 198 VVQKMKMQRTIVIRRDYLH 254
VV KMKMQRTIVIRRDYLH
Sbjct: 1 VVTKMKMQRTIVIRRDYLH 19
>AL359734-1|CAI41259.1| 277|Homo sapiens seven in absentia homolog
1-like (Drosophila) protein.
Length = 277
Score = 29.1 bits (62), Expect = 8.1
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -2
Query: 302 RTYSCAVSRTYCIWVGVKVIAADHDSSLHLHFLNDAGED 186
R YSC T C W G H + +H + GED
Sbjct: 119 RLYSCPCPGTVCKWQGTMDAIMPHLTKMHEYITTIEGED 157
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,882,221
Number of Sequences: 237096
Number of extensions: 1346528
Number of successful extensions: 2631
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2622
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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