Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30440
(471 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-1421|AAM71028.1| 155|Drosophila melanogaster CG8857-PC... 126 2e-29
AE013599-1420|AAF58552.1| 155|Drosophila melanogaster CG8857-PA... 126 2e-29
AE013599-1422|AAM71029.1| 154|Drosophila melanogaster CG8857-PB... 116 2e-26
X53992-1|CAA37939.1| 1645|Drosophila melanogaster betaH spectrin... 27 9.7
AL021086-2|CAA15933.1| 995|Drosophila melanogaster EG:86E4.2 pr... 27 9.7
AE014296-651|AAF47766.1| 4097|Drosophila melanogaster CG12008-PA... 27 9.7
AE014296-650|AAS64958.1| 4118|Drosophila melanogaster CG12008-PB... 27 9.7
AE014296-649|AAS64957.1| 4207|Drosophila melanogaster CG12008-PC... 27 9.7
>AE013599-1421|AAM71028.1| 155|Drosophila melanogaster CG8857-PC,
isoform C protein.
Length = 155
Score = 126 bits (304), Expect = 2e-29
Identities = 63/86 (73%), Positives = 72/86 (83%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 EKAFQKQATVFLNRK---GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSX 176
E+AFQKQ V LNRK G K+K +R ++VGLGFKTPREAI+GTYIDKKCP+TG+V
Sbjct: 6 ERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRI 65
Query: 177 RGRILTGVVQKMKMQRTIVIRRDYLH 254
RGRILTGVV+K KMQRTIVIRRDYLH
Sbjct: 66 RGRILTGVVRKAKMQRTIVIRRDYLH 91
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +2
Query: 263 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 95 KYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142
>AE013599-1420|AAF58552.1| 155|Drosophila melanogaster CG8857-PA,
isoform A protein.
Length = 155
Score = 126 bits (304), Expect = 2e-29
Identities = 63/86 (73%), Positives = 72/86 (83%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 EKAFQKQATVFLNRK---GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSX 176
E+AFQKQ V LNRK G K+K +R ++VGLGFKTPREAI+GTYIDKKCP+TG+V
Sbjct: 6 ERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRI 65
Query: 177 RGRILTGVVQKMKMQRTIVIRRDYLH 254
RGRILTGVV+K KMQRTIVIRRDYLH
Sbjct: 66 RGRILTGVVRKAKMQRTIVIRRDYLH 91
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +2
Query: 263 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 95 KYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142
>AE013599-1422|AAM71029.1| 154|Drosophila melanogaster CG8857-PB,
isoform B protein.
Length = 154
Score = 116 bits (279), Expect = 2e-26
Identities = 55/85 (64%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 TEKAFQKQ-ATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSXR 179
TE++F+KQ A V + RK +K R ++ +GLGF+ P EAI+GTYIDKKCP+TG+V R
Sbjct: 6 TERSFRKQHAVVVVRRKSPNLKKRPRFYRQIGLGFRAPAEAIDGTYIDKKCPWTGDVRIR 65
Query: 180 GRILTGVVQKMKMQRTIVIRRDYLH 254
GRILTGVV+K KMQRTIVIRRDYLH
Sbjct: 66 GRILTGVVRKAKMQRTIVIRRDYLH 90
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +2
Query: 263 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 406
KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 94 KYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 141
>X53992-1|CAA37939.1| 1645|Drosophila melanogaster betaH spectrin
protein.
Length = 1645
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 221 ENYRDPPRLPSHLPKYNRFEKRHR 292
ENYRD LP L K+ FE+ R
Sbjct: 1436 ENYRDLSNLPRKLQKHQAFERELR 1459
>AL021086-2|CAA15933.1| 995|Drosophila melanogaster EG:86E4.2
protein.
Length = 995
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 63 RKDMRHHKNVGLGFKTPREAIEGTYIDKKC 152
RK++ HH G T R++ GT+I K+C
Sbjct: 953 RKELPHHLFACTGRSTLRDSPIGTFIRKRC 982
>AE014296-651|AAF47766.1| 4097|Drosophila melanogaster CG12008-PA,
isoform A protein.
Length = 4097
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 221 ENYRDPPRLPSHLPKYNRFEKRHR 292
ENYRD LP L K+ FE+ R
Sbjct: 1423 ENYRDLSNLPRKLQKHQAFERELR 1446
>AE014296-650|AAS64958.1| 4118|Drosophila melanogaster CG12008-PB,
isoform B protein.
Length = 4118
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 221 ENYRDPPRLPSHLPKYNRFEKRHR 292
ENYRD LP L K+ FE+ R
Sbjct: 1423 ENYRDLSNLPRKLQKHQAFERELR 1446
>AE014296-649|AAS64957.1| 4207|Drosophila melanogaster CG12008-PC,
isoform C protein.
Length = 4207
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 221 ENYRDPPRLPSHLPKYNRFEKRHR 292
ENYRD LP L K+ FE+ R
Sbjct: 1423 ENYRDLSNLPRKLQKHQAFERELR 1446
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,574,839
Number of Sequences: 53049
Number of extensions: 416784
Number of successful extensions: 915
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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