Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30439
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    85   2e-18
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    85   2e-18
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    85   2e-18
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    85   2e-18
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   3.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   3.0  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   5.2  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   6.9  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 85.4 bits (202), Expect = 2e-18
 Identities = 35/77 (45%), Positives = 52/77 (67%)
 Frame = +2

Query: 254 SFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 433
           ++ +DNEA+YDIC R L +  P+Y +LN L+   +S +T  LRF G LN DL +   N+V
Sbjct: 95  TYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMV 154

Query: 434 PYPRIHFPLVTYAPVIS 484
           P+PR+HF +  +AP+ S
Sbjct: 155 PFPRLHFFMPGFAPLTS 171



 Score = 60.5 bits (140), Expect = 5e-11
 Identities = 28/82 (34%), Positives = 46/82 (56%)
 Frame = +3

Query: 6   VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 185
           VLD +RK  + C  LQGF + H            LL+ ++  +Y  +    +++ P+P+V
Sbjct: 12  VLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKV 71

Query: 186 STAVVEPYNSILTTHTTLEHSD 251
           S  VVEPYN+ L+ H  +E++D
Sbjct: 72  SDTVVEPYNATLSIHQLVENTD 93


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 85.4 bits (202), Expect = 2e-18
 Identities = 35/77 (45%), Positives = 52/77 (67%)
 Frame = +2

Query: 254 SFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 433
           ++ +DNEA+YDIC R L +  P+Y +LN L+   +S +T  LRF G LN DL +   N+V
Sbjct: 95  TYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMV 154

Query: 434 PYPRIHFPLVTYAPVIS 484
           P+PR+HF +  +AP+ S
Sbjct: 155 PFPRLHFFMPGFAPLTS 171



 Score = 60.5 bits (140), Expect = 5e-11
 Identities = 28/82 (34%), Positives = 46/82 (56%)
 Frame = +3

Query: 6   VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 185
           VLD +RK  + C  LQGF + H            LL+ ++  +Y  +    +++ P+P+V
Sbjct: 12  VLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKV 71

Query: 186 STAVVEPYNSILTTHTTLEHSD 251
           S  VVEPYN+ L+ H  +E++D
Sbjct: 72  SDTVVEPYNATLSIHQLVENTD 93


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 85.4 bits (202), Expect = 2e-18
 Identities = 35/77 (45%), Positives = 52/77 (67%)
 Frame = +2

Query: 254 SFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 433
           ++ +DNEA+YDIC R L +  P+Y +LN L+   +S +T  LRF G LN DL +   N+V
Sbjct: 95  TYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMV 154

Query: 434 PYPRIHFPLVTYAPVIS 484
           P+PR+HF +  +AP+ S
Sbjct: 155 PFPRLHFFMPGFAPLTS 171



 Score = 60.5 bits (140), Expect = 5e-11
 Identities = 28/82 (34%), Positives = 46/82 (56%)
 Frame = +3

Query: 6   VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 185
           VLD +RK  + C  LQGF + H            LL+ ++  +Y  +    +++ P+P+V
Sbjct: 12  VLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKV 71

Query: 186 STAVVEPYNSILTTHTTLEHSD 251
           S  VVEPYN+ L+ H  +E++D
Sbjct: 72  SDTVVEPYNATLSIHQLVENTD 93


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 85.4 bits (202), Expect = 2e-18
 Identities = 35/77 (45%), Positives = 52/77 (67%)
 Frame = +2

Query: 254 SFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 433
           ++ +DNEA+YDIC R L +  P+Y +LN L+   +S +T  LRF G LN DL +   N+V
Sbjct: 95  TYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMV 154

Query: 434 PYPRIHFPLVTYAPVIS 484
           P+PR+HF +  +AP+ S
Sbjct: 155 PFPRLHFFMPGFAPLTS 171



 Score = 60.5 bits (140), Expect = 5e-11
 Identities = 28/82 (34%), Positives = 46/82 (56%)
 Frame = +3

Query: 6   VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 185
           VLD +RK  + C  LQGF + H            LL+ ++  +Y  +    +++ P+P+V
Sbjct: 12  VLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKV 71

Query: 186 STAVVEPYNSILTTHTTLEHSD 251
           S  VVEPYN+ L+ H  +E++D
Sbjct: 72  SDTVVEPYNATLSIHQLVENTD 93


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = +2

Query: 512 PSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTS 622
           PSP    H+S  PT     T  MA+      CT  TS
Sbjct: 13  PSPPHHHHSSQSPTS--TTTVTMATASPVPACTTTTS 47


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = +2

Query: 512 PSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTS 622
           PSP    H+S  PT     T  MA+      CT  TS
Sbjct: 13  PSPPHHHHSSQSPTS--TTTVTMATASPVPACTTTTS 47


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -3

Query: 639 VHILGYDVTTVQHTASHV 586
           +H + Y ++TV HTAS++
Sbjct: 733 IHTIEYVLSTVSHTASYL 750


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 489 RRPTMNSFRRRDHKRMLRARQPDGEMRPP 575
           RR  +    R++ K+  + +QPDG+ R P
Sbjct: 425 RRLELREVGRKEAKKRGKQQQPDGKWRFP 453


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,943
Number of Sequences: 2352
Number of extensions: 18420
Number of successful extensions: 59
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)