Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30437
         (755 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT007225-1|AAP35889.1|  382|Homo sapiens protein kinase, cAMP-de...    33   0.84 
BC002763-1|AAH02763.1|  382|Homo sapiens PRKAR2A protein protein.      33   0.84 
X14940-4|CAA33070.1|  129|Homo sapiens protein ( Human C mu gene...    31   3.4  
J00260-1|AAB59421.1|  114|Homo sapiens immunoglobulin mu chain p...    31   3.4  

>BT007225-1|AAP35889.1|  382|Homo sapiens protein kinase,
           cAMP-dependent, regulatory, type II, alpha protein.
          Length = 382

 Score = 33.5 bits (73), Expect = 0.84
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = +2

Query: 374 ESAKVENRVRSGDVTGSYIYKDGKNDLVKVRYWSDRDGFHQEDNLLR 514
           +S +V  R++  DV G  IYKDG+  + + +  S++DG +QE  + R
Sbjct: 263 KSLEVSERMKIVDVIGEKIYKDGERIITQTK--SNKDGGNQEVEIAR 307


>BC002763-1|AAH02763.1|  382|Homo sapiens PRKAR2A protein protein.
          Length = 382

 Score = 33.5 bits (73), Expect = 0.84
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = +2

Query: 374 ESAKVENRVRSGDVTGSYIYKDGKNDLVKVRYWSDRDGFHQEDNLLR 514
           +S +V  R++  DV G  IYKDG+  + + +  S++DG +QE  + R
Sbjct: 263 KSLEVSERMKIVDVIGEKIYKDGERIITQTK--SNKDGGNQEVEIAR 307


>X14940-4|CAA33070.1|  129|Homo sapiens protein ( Human C mu gene
           for IgM heavy chain exons CH1-4, secretory. ).
          Length = 129

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/69 (24%), Positives = 31/69 (44%)
 Frame = +3

Query: 114 EPEEAQKYLNSPPFTDPQLAGRTAVLPLIKYNDPRFRTVEAGPTLGHTGRTERKSRILRT 293
           +P   +KY+ S P  +PQ  GR     ++  ++  + T E    + H       +R+   
Sbjct: 47  QPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVAHEA---LPNRVTER 103

Query: 294 TLKKYTTRP 320
           T+ K T +P
Sbjct: 104 TVDKSTGKP 112


>J00260-1|AAB59421.1|  114|Homo sapiens immunoglobulin mu chain
           protein.
          Length = 114

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/69 (24%), Positives = 31/69 (44%)
 Frame = +3

Query: 114 EPEEAQKYLNSPPFTDPQLAGRTAVLPLIKYNDPRFRTVEAGPTLGHTGRTERKSRILRT 293
           +P   +KY+ S P  +PQ  GR     ++  ++  + T E    + H       +R+   
Sbjct: 32  QPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVAHDA---LPNRVTER 88

Query: 294 TLKKYTTRP 320
           T+ K T +P
Sbjct: 89  TVDKSTGKP 97


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,176,406
Number of Sequences: 237096
Number of extensions: 2194545
Number of successful extensions: 9497
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9497
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)