Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30434
         (400 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   3.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   4.5  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    20   7.8  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   7.8  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    20   7.8  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    20   7.8  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 141 FVAQSLNKFLVCG 103
           F+ +  NKF++CG
Sbjct: 317 FLQEGANKFVICG 329


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 233 KLSAAPVCHQRFRRGN 280
           K  A P+C++RF R +
Sbjct: 373 KRFACPICNKRFMRSD 388


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 234 FPCLAILVNLAETSPFSKLFVVVNLDQ 154
           F  +AI  +LAE S ++  +  V+LD+
Sbjct: 9   FFVIAIASSLAENSKYTTKYDNVDLDE 35


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +3

Query: 270 GEETPALDVLKDYLKXXXXXLGVML 344
           G +    D+  DYL      LGV L
Sbjct: 22  GSKKTVFDIPNDYLNDKYKPLGVSL 46


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 100 HHSSQPKHIVLLASCQE 50
           HHS  P H V  A+  E
Sbjct: 52  HHSHMPPHSVFAANNAE 68


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 100 HHSSQPKHIVLLASCQE 50
           HHS  P H V  A+  E
Sbjct: 52  HHSHMPPHSVFAANNAE 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,478
Number of Sequences: 336
Number of extensions: 1522
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)