Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30434
(400 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45) 149 6e-37
SB_19199| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_3513| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_55500| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=2.8e-24) 31 0.35
SB_16903| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.35
SB_33518| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.60
SB_34419| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_22093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_48977| Best HMM Match : TPR_1 (HMM E-Value=0) 28 2.4
SB_7961| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_58104| Best HMM Match : TPR_1 (HMM E-Value=0) 28 3.2
SB_7278| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_10980| Best HMM Match : PID (HMM E-Value=0.00012) 28 3.2
SB_42699| Best HMM Match : SIR2 (HMM E-Value=1.6e-12) 27 4.3
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 27 4.3
SB_26492| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_38603| Best HMM Match : TPR_1 (HMM E-Value=2e-20) 27 5.6
SB_20329| Best HMM Match : TPR_1 (HMM E-Value=0) 27 5.6
SB_54602| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_54462| Best HMM Match : TPR_1 (HMM E-Value=3.9e-32) 27 7.4
SB_53079| Best HMM Match : TPR_1 (HMM E-Value=0) 27 7.4
SB_38530| Best HMM Match : TPR_1 (HMM E-Value=3.4e-32) 27 7.4
SB_33148| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-09) 27 7.4
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_34106| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-10) 27 7.4
SB_27648| Best HMM Match : Ribosomal_L18ae (HMM E-Value=2.8) 27 7.4
SB_11722| Best HMM Match : Fer4 (HMM E-Value=0.25) 27 7.4
SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22) 27 7.4
SB_1845| Best HMM Match : TPR_1 (HMM E-Value=3.7e-09) 26 9.8
SB_1148| Best HMM Match : TPR_1 (HMM E-Value=0) 26 9.8
SB_232| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
>SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)
Length = 427
Score = 149 bits (362), Expect = 6e-37
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = +1
Query: 1 ALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKK 180
ALIH GL GLHEAAK+LDKR+A LC+L+ NCDEA Y KLV+ALC EH IPL+KVD++KK
Sbjct: 32 ALIHDGLSRGLHEAAKSLDKREAHLCILSNNCDEAMYVKLVEALCAEHGIPLLKVDDSKK 91
Query: 181 LGEWAGLCKIDKDGKARKIVGCSCVSSK 264
LGEWAGLCKIDK+GKARK+VGCSCV K
Sbjct: 92 LGEWAGLCKIDKEGKARKVVGCSCVVVK 119
>SB_19199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 68
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +1
Query: 55 DKRQAVLCVLAEN--CDEA--AYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 198
D LCVL EN D + +L++A C E+ IP+VKVD+++KL AG
Sbjct: 2 DPDDVTLCVLVENRHADPGIQVHCRLIEAFCWEYPIPVVKVDSSRKLKTIAG 53
>SB_3513| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +1
Query: 55 DKRQAVLCVLAEN--CDEA--AYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 198
D LCVL EN D + +L++A C E+ IP+VKVD+++KL AG
Sbjct: 2 DPDDVTLCVLVENRHADPGIQVHCRLIEAFCWEYPIPVVKVDSSRKLKTIAG 53
>SB_55500| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=2.8e-24)
Length = 172
Score = 31.1 bits (67), Expect = 0.35
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +1
Query: 25 HGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 189
+G++ ++ ++A L V+A + D + ALC + Q+P V +LG+
Sbjct: 47 YGINHITSLVENKKAQLVVIAHDVDPIEIVVWLPALCRKMQVPYCIVKGKARLGK 101
>SB_16903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 31.1 bits (67), Expect = 0.35
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +1
Query: 25 HGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 189
+G++ ++ ++A L V+A + D + ALC + Q+P V +LG+
Sbjct: 138 YGINHITSLVENKKAQLVVIAHDVDPIEIVVWLPALCRKMQVPYCIVKGKARLGK 192
>SB_33518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 30.3 bits (65), Expect = 0.60
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 177 FVVVNLDQWNLMFVAQSLNKFLVCGFITVLSQNT*YCLPLVKSFSGFV 34
F VNL +W++ F A +L+++ +C F TV C V F F+
Sbjct: 256 FQAVNLSRWSMCFQAVNLSRWFMC-FQTVNLSRWFMCFQAVNLFRWFM 302
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 195 SPFSKLFVVVNLDQWNLMFVAQSLNKFLVC 106
S +S F VNL +W + F A +L+++ +C
Sbjct: 178 SRWSMCFQTVNLSRWFMCFQAVNLSRWFMC 207
Score = 27.1 bits (57), Expect = 5.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 177 FVVVNLDQWNLMFVAQSLNKFLVC 106
F VNL +W + F A +L+++L+C
Sbjct: 112 FQAVNLSRWFMCFQAVNLSRWLMC 135
Score = 27.1 bits (57), Expect = 5.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 177 FVVVNLDQWNLMFVAQSLNKFLVC 106
F VNL +W + F A +L+++L+C
Sbjct: 196 FQAVNLSRWFMCFQAVNLSRWLMC 219
Score = 27.1 bits (57), Expect = 5.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 177 FVVVNLDQWNLMFVAQSLNKFLVC 106
F VNL +W + F A +L+++L+C
Sbjct: 316 FQAVNLSRWFMCFQAVNLSRWLMC 339
>SB_34419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 89 RTVMKPHTRNLFRLCATNIRFHWSRLTTTKSLENGLVSARLTRMARQGKLSAAPVCH 259
RT + RNL R+ + RL ++ +E L + +LTR A++ +S A C+
Sbjct: 541 RTPVDSIPRNLLRVLTATCGYSQVRLLVSQRIEVWLQNPKLTRPAQELLMSLAQNCN 597
>SB_22093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 742
Score = 28.3 bits (60), Expect = 2.4
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +1
Query: 31 LHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKK----LGEWAG 198
LH+ LD A + +L N + Q L P+ DN + + ++ G
Sbjct: 363 LHQRGVNLDTTTANMTILTSNIIQQLNNVSFQGLTG----PVSFTDNQRNGIIAIKQFQG 418
Query: 199 LCKIDKDGKARKIVGC 246
+ +DK K R ++GC
Sbjct: 419 MAPLDKPAKIRLVIGC 434
>SB_48977| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 725
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 195 WSLQD*QGWQGKENCRLLLCVIKDFGEETPALDV 296
+SL D G Q EN + LC+ + FGEE DV
Sbjct: 61 YSLGD--GGQAMENLKNALCIYEKFGEELKQADV 92
>SB_7961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1957
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 13 GGLVHGLHEAAK--ALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQI 150
G L LHE +K +L R A+ C ++E + +++V N H I
Sbjct: 167 GSLHFVLHETSKEISLPDRVAIFCDVSEGLEFLKSRRIVHCFLNSHSI 214
>SB_58104| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 398
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 195 WSLQD*QGWQGKENCRLLLCVIKDFGEETPALDV 296
+SL D G Q EN + LC+ + FGEE +DV
Sbjct: 243 YSLGD--GGQAMENYKNALCIHEKFGEERKQVDV 274
>SB_7278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 498
Score = 27.9 bits (59), Expect = 3.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 222 QGKENCRLLLCVIKDFGEETPALDVLKD 305
Q EN + LC+++ FGEE DV ++
Sbjct: 207 QAMENYKNALCILEKFGEEREQADVYRN 234
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 222 QGKENCRLLLCVIKDFGEETPALDV 296
Q EN + LC+++ FGEE DV
Sbjct: 247 QAMENYKNALCILEKFGEERKQADV 271
>SB_10980| Best HMM Match : PID (HMM E-Value=0.00012)
Length = 463
Score = 27.9 bits (59), Expect = 3.2
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +2
Query: 38 KPLKLLTRGKQYYVFWLRTVMKPHTRNLFRLCATNIRFHWSRLTTTKSLENGL-----VS 202
+P+ L R + + RT HT N+ + + + + T+S+ G ++
Sbjct: 105 RPITLKIRPDEIVIVDERTSSVLHTHNVAWVLSLGVFTETRDCSGTRSVGRGETRLDPIT 164
Query: 203 ARLTRMARQGKLSAAPVCHQRFR 271
AR R+A L P+CHQR R
Sbjct: 165 ARPARLAHP--LKGRPLCHQRHR 185
>SB_42699| Best HMM Match : SIR2 (HMM E-Value=1.6e-12)
Length = 501
Score = 27.5 bits (58), Expect = 4.3
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 186 RMGWSLQD*QGWQGKENCRLLLCVIK 263
++ W + Q + K+NCRL+ C++K
Sbjct: 9 KLEWRTKFAQASENKDNCRLVKCILK 34
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 284 SVGCAQGLPQVVELILRCNANPY 352
S+ CA G VVEL+L ANPY
Sbjct: 83 SLACAGGHLAVVELLLAHGANPY 105
>SB_26492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 195 WSLQD*QGWQGKENCRLLLCVIKDFGEETPALDV 296
+SL D G Q EN + LC+ + FGEE DV
Sbjct: 439 YSLGD--GGQAMENLKNALCIHEKFGEERGQADV 470
>SB_38603| Best HMM Match : TPR_1 (HMM E-Value=2e-20)
Length = 313
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 195 WSLQD*QGWQGKENCRLLLCVIKDFGEE 278
+SL D G Q EN + LC+++ FGEE
Sbjct: 35 YSLGD--GGQAMENLKNALCILEKFGEE 60
>SB_20329| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 330
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 222 QGKENCRLLLCVIKDFGEETPALDV 296
Q EN + LC+++ FGEE DV
Sbjct: 119 QAMENYKNALCILEKFGEERKQADV 143
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 222 QGKENCRLLLCVIKDFGEETPALDV 296
Q EN + LC+ + FGEE DV
Sbjct: 159 QAMENYKKALCIYEKFGEERKQADV 183
>SB_54602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 26.6 bits (56), Expect = 7.4
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 118 VSCMRLHHSSQPKHIVLLASCQEL*RLREDRAQDHHGLK 2
VSC +LH S+ KH LA E L E+ + LK
Sbjct: 358 VSCQKLHWSTHKKHCQRLAKEYEQELLMEEEIKRQEELK 396
>SB_54462| Best HMM Match : TPR_1 (HMM E-Value=3.9e-32)
Length = 425
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 222 QGKENCRLLLCVIKDFGEETPALDV 296
Q EN + LC+++ FGEE DV
Sbjct: 119 QAMENYKHALCILEKFGEECRQADV 143
>SB_53079| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 772
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 222 QGKENCRLLLCVIKDFGEETPALDVLKD 305
Q +N + LC+ + FGEE DV K+
Sbjct: 279 QAMKNVKNALCIYEKFGEERKQADVYKN 306
>SB_38530| Best HMM Match : TPR_1 (HMM E-Value=3.4e-32)
Length = 803
Score = 26.6 bits (56), Expect = 7.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 222 QGKENCRLLLCVIKDFGEETPALDV 296
Q EN + LC+ K FGEE DV
Sbjct: 166 QAMENYKHALCIHKKFGEEREQADV 190
>SB_33148| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-09)
Length = 330
Score = 26.6 bits (56), Expect = 7.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 10 HGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 123
+G ++ L A + R LCV A CDE ++ LV
Sbjct: 79 NGRVILSLAVADLCIGLRLEALCVFAARCDEMTWRVLV 116
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 178 KLGEWAGLCKIDKDGKARKIVGCSCVSSKISARKLQRWMCSRTTSSRRA 324
K W K + +A VGC + + R+ +R++CS TS+++A
Sbjct: 490 KKNAWRVFLKSQEWQEAIGDVGCEVPLPQETERRCERFVCSLYTSAKKA 538
>SB_34106| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-10)
Length = 262
Score = 26.6 bits (56), Expect = 7.4
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 88 ENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDG 222
E+ + Y ++ +L E Q PL+ V + + E LC + + G
Sbjct: 125 EDFTDLDYNTMMASLIGEEQPPLIAVSDTPAIMEVESLCSLIRGG 169
>SB_27648| Best HMM Match : Ribosomal_L18ae (HMM E-Value=2.8)
Length = 796
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/63 (22%), Positives = 27/63 (42%)
Frame = +1
Query: 136 NEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVSSKISARKLQRWMCSRTTSS 315
N + L +D +K G W + + K R + C+ +S + A + C+R +
Sbjct: 410 NHPRPDLNTLDESKPEGAWQSGTDLTEQRKKRHFMSCNTLSLRSLASRRDARACARAEDA 469
Query: 316 RRA 324
R+
Sbjct: 470 ARS 472
>SB_11722| Best HMM Match : Fer4 (HMM E-Value=0.25)
Length = 401
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 341 HYT*GLARRLEVVLEHIQRWSFLAEIFD 258
HY RR E+ L+ +Q+W L E F+
Sbjct: 254 HYRWDKLRRAEIDLQRVQQWIKLEEAFE 281
>SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22)
Length = 1151
Score = 26.6 bits (56), Expect = 7.4
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 117 TCSGSVQRTSDSTXXXXXXXKAWRMGWSLQD*QGWQGKEN 236
+C G V+R + T R+ +L D GWQG N
Sbjct: 218 SCVGIVERCNAPTVDLRRMCSCKRVTCTLDDWSGWQGTPN 257
>SB_1845| Best HMM Match : TPR_1 (HMM E-Value=3.7e-09)
Length = 105
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 222 QGKENCRLLLCVIKDFGEE 278
Q NC+ LC+++ FGEE
Sbjct: 39 QAMVNCKNALCILEKFGEE 57
>SB_1148| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 860
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 222 QGKENCRLLLCVIKDFGEE 278
Q NC+ LC+++ FGEE
Sbjct: 93 QAMVNCKNALCILEKFGEE 111
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 222 QGKENCRLLLCVIKDFGEE 278
Q NC+ LC+++ FGEE
Sbjct: 293 QAMVNCKNALCILEKFGEE 311
>SB_232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 713
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 222 QGKENCRLLLCVIKDFGEE 278
Q NC+ LC+ + FGEE
Sbjct: 287 QAMMNCKKALCIFRKFGEE 305
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,190,385
Number of Sequences: 59808
Number of extensions: 218046
Number of successful extensions: 844
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 703143849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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