Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30434
         (400 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   0.97 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   0.97 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.0  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   3.9  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    20   9.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   9.1  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 0.97
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +2

Query: 152 HWSRLTTTKSLENGLVSARLTRMARQGKLSAAPVCHQRFRRGNSS 286
           HWSR  T  SL+N  +S  ++ +  Q  L   P        GN S
Sbjct: 22  HWSRGNTWLSLDNSNMS--MSSVGPQSPLDMKPDTASLINPGNFS 64


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 0.97
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +2

Query: 152 HWSRLTTTKSLENGLVSARLTRMARQGKLSAAPVCHQRFRRGNSS 286
           HWSR  T  SL+N  +S  ++ +  Q  L   P        GN S
Sbjct: 22  HWSRGNTWLSLDNSNMS--MSSVGPQSPLDMKPDTASLINPGNFS 64


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 163  P*PVESDVRCTEPEQVSCMRLHHSSQ 86
            P  VESD   ++P+Q++  R   S+Q
Sbjct: 1777 PGDVESDESESDPDQLTSSRTESSNQ 1802


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 163  P*PVESDVRCTEPEQVSCMRLHHSSQ 86
            P  VESD   ++P+Q++  R   S+Q
Sbjct: 1773 PGDVESDESESDPDQLTSSRTESSNQ 1798


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -3

Query: 257 DTQEQPTIFLALPSL 213
           +T++Q T+F+A+P +
Sbjct: 66  NTEQQSTVFVAIPRI 80


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 31  LHEAAKALDKRQAVLC 78
           +H+A K L++R   LC
Sbjct: 79  IHDAYKDLNQRYGALC 94


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 200 SARLTRMARQGKLSAAPVCHQRFRRGNSS 286
           S R+T   ++ KL  +P+C    R  NS+
Sbjct: 194 SIRITPAKKRIKLEQSPLCPPAPRLTNSN 222


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,181
Number of Sequences: 438
Number of extensions: 1605
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)