Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30433
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    25   0.50 
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   2.7  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   3.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   3.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   3.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.2  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   8.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.2  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +2

Query: 56  PHFDNNPRG-TIEDAIDGLIQIANNPLILVATLGTIVSIAFFN 181
           P  +N  RG T+E AI    +    P  +VATLGT  S  F N
Sbjct: 211 PDDNNRLRGETLEVAIKEDREAGLIPFYVVATLGTTSSCTFDN 253


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +1

Query: 64  RQQPEGNHRRRYRWPDTNRQQSIDPRGNAWYDCIDSFLQFRRHQRYQGNVC 216
           ++Q    HR+  + P   RQ  +D     W D I + L +  +  Y G  C
Sbjct: 256 KRQSSRRHRKNLKDPCRRRQMYVDFGSVGWNDWIVAPLGYDAY--YCGGEC 304


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 77  SGCCRSGAGPESSRTRPTDRTAQ 9
           S  C  G+G + SRT P+ +  Q
Sbjct: 147 SSVCSPGSGHQDSRTSPSGQHLQ 169


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 77  SGCCRSGAGPESSRTRPTDRTAQ 9
           S  C  G+G + SRT P+ +  Q
Sbjct: 147 SSVCSPGSGHQDSRTSPSGQHLQ 169


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 77  SGCCRSGAGPESSRTRPTDRTAQ 9
           S  C  G+G + SRT P+ +  Q
Sbjct: 147 SSVCSPGSGHQDSRTSPSGQHLQ 169


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 6   SLCCPVCWSCSTGLRPRPTSTTTRGEP*KTLSMA 107
           S+C  +  S  + LRPR +  +  G+    +S A
Sbjct: 225 SICIEIWQSSESSLRPRSSQKSAPGKRTPLISRA 258


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 13/49 (26%), Positives = 19/49 (38%)
 Frame = +2

Query: 56  PHFDNNPRGTIEDAIDGLIQIANNPLILVATLGTIVSIAFFNFAGISVT 202
           P  D NP  +I           +NP  L    GT   ++ +  AG+  T
Sbjct: 15  PSTDQNPYPSIGVESSAFYSPLSNPYALKDAGGTAADMSAWTSAGLQPT 63


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 640 FIKAFKLFIYRKLIVTYLFY 581
           F KAFK+ I    ++T LF+
Sbjct: 80  FYKAFKIGILLNQLITPLFF 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,450
Number of Sequences: 336
Number of extensions: 3744
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)