Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30432X
         (304 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   2.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   3.8  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    20   6.6  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +2

Query: 125 VEVDVNSRVQDATLAPPLHLAASAGNEV 208
           VEV +   VQ   L+ P HL   A N V
Sbjct: 580 VEVVLVDEVQSPNLSHPFHLHGYAFNVV 607


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 125 VEVDVNSRVQDATLAPPLHLAASAGNEV 208
           VE+ +   VQ   L+ P HL   A N +
Sbjct: 580 VEIVLVDEVQQPNLSHPFHLHGYAFNVI 607


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 12/37 (32%), Positives = 14/37 (37%)
 Frame = -1

Query: 217 PEQDLVPRAGGEVXXXXXRGVLHARVHVHLHGEQEHH 107
           P    + R+ GE         L A   VHLH    HH
Sbjct: 59  PSVPFIARSLGEDIVTYSGHKLKAGSMVHLHIYDMHH 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,788
Number of Sequences: 336
Number of extensions: 819
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5412171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)