Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30431
         (792 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    27   0.23 
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    27   0.23 
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    27   0.23 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.7  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   6.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.5  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   8.5  

>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +1

Query: 532 TLF*YLNNIQTKKWAKRNTVNFFISN 609
           TLF Y  +I+T K+A+  ++N  +SN
Sbjct: 33  TLFEYREDIRTAKFARGRSINMALSN 58


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +1

Query: 532 TLF*YLNNIQTKKWAKRNTVNFFISN 609
           TLF Y  +I+T K+A+  ++N  +SN
Sbjct: 33  TLFEYREDIRTAKFARGRSINMALSN 58


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +1

Query: 532 TLF*YLNNIQTKKWAKRNTVNFFISN 609
           TLF Y  +I+T K+A+  ++N  +SN
Sbjct: 33  TLFEYREDIRTAKFARGRSINMALSN 58


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 159 SSNAFRFEGWGSRCNCTEILKLISQGGWR 245
           + N+ ++ G        EI++L  +GGW+
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWK 312


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 459  HLKTTQSSQFTETFKIPTSVNVRLNAILIF 548
            H  T+ SS    T  IPT+      AIL F
Sbjct: 1010 HSATSNSSVNANTNNIPTNAGTTPGAILAF 1039


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 72  VDSFHNTLMVGPLVCPHG*VPPP 140
           +D  ++T    P V PH  VPPP
Sbjct: 1   MDLTNSTEKFLPTVLPHQEVPPP 23


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 462 LKTTQSSQFTETFKIPTSVN 521
           LKTTQS   T+   + +SVN
Sbjct: 40  LKTTQSVSVTKDQDVSSSVN 59


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -1

Query: 183 LQTETHYCFTAEIGRAVVPTRADIQEV 103
           +QT+      + +G+  +PT  D+QE+
Sbjct: 18  IQTKVREEILSVVGKEKIPTYNDLQEL 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,113
Number of Sequences: 336
Number of extensions: 3483
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)