Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30431
         (792 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.7  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   8.2  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 382 SNLQFLQLSYSKFSPSQISV*YNITTILRQRSPV 483
           SN   LQLSYS    S +   Y I T+  Q+S V
Sbjct: 613 SNTASLQLSYSNQYNSTLLTGYTIRTLSYQQSAV 646


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 382 SNLQFLQLSYSKFSPSQISV*YNITTILRQRSPV 483
           SN   LQLSYS    S +   Y I T+  Q+S V
Sbjct: 614 SNTASLQLSYSNQYNSTLLTGYTIRTLSYQQSAV 647


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +3

Query: 78   SFHNTLMVGPLVCPHG*VPPPCLFL 152
            SFH  L +   V PHG   PP L L
Sbjct: 1240 SFHAGLSIAASVNPHGNDCPPALKL 1264


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,298
Number of Sequences: 2352
Number of extensions: 14766
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)