Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30430
(313 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0851 - 7992158-7992550 46 6e-06
12_02_1208 - 27016400-27017176 31 0.25
12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001 31 0.25
11_01_0232 + 1794081-1795175,1796087-1796782 31 0.25
01_05_0346 + 21191542-21191783,21191988-21192072,21192159-211924... 29 0.58
05_04_0126 + 18252594-18256922 29 1.0
03_05_1011 + 29658144-29658310,29659531-29659676,29660526-296606... 28 1.3
03_02_0839 - 11653332-11653373,11653515-11653586,11653678-11654223 28 1.3
02_01_0014 - 87215-87280,87358-87495,87593-87721,87801-87869,879... 28 1.3
01_06_0676 + 31101633-31102192,31102450-31102807,31103033-31103305 28 1.3
12_02_1205 - 26982163-26982702 28 1.8
06_03_0854 + 25400855-25403741,25406174-25407708 28 1.8
01_06_0228 + 27708018-27708213,27708294-27708403 28 1.8
12_02_1206 - 26991624-26992172 27 2.3
07_01_0368 + 2739908-2740320,2740437-2740816,2740893-2740977,274... 27 2.3
04_04_1681 + 35322992-35323765 27 2.3
01_06_1290 - 36023353-36024096 27 2.3
11_06_0743 + 26847652-26849424 27 3.1
12_02_1201 - 26946817-26947350 27 4.1
06_03_0797 - 24697241-24698278 27 4.1
03_02_0272 - 7034043-7034800,7034884-7034923 27 4.1
01_01_0248 + 2041015-2041762,2042112-2042149 27 4.1
09_02_0335 + 7390307-7390777 26 5.4
03_05_0584 - 25839566-25840255 26 5.4
02_04_0183 - 20723298-20724290 26 5.4
02_01_0393 - 2863335-2864534 26 5.4
12_02_1202 - 26957254-26957778 26 7.2
12_02_0242 + 16213265-16213945,16216311-16216586,16217051-16217128 26 7.2
10_08_0435 + 17905728-17905901,17906608-17906931,17907205-179073... 26 7.2
10_02_0195 + 6578384-6578629,6578710-6579300,6586302-6587512,658... 26 7.2
03_05_0260 + 22468243-22468292,22469125-22469125,22469130-224692... 26 7.2
08_02_0536 - 18302394-18302826,18302903-18303183,18303480-183037... 25 9.5
06_03_0800 + 24709590-24710642 25 9.5
05_04_0120 - 18175292-18176206,18177315-18177785,18178562-18179635 25 9.5
04_04_0057 + 22410167-22411330 25 9.5
04_01_0340 + 4435344-4435637 25 9.5
03_02_0642 + 10086400-10086505,10086675-10087014,10087072-100871... 25 9.5
02_02_0442 - 10318576-10319109 25 9.5
01_06_0088 + 26305326-26306372 25 9.5
>12_01_0851 - 7992158-7992550
Length = 130
Score = 46.0 bits (104), Expect = 6e-06
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1
Query: 16 VCGSNIYTTGEDVKIKPDSEYPEWLWSL 99
V G+NI G D K++PDSEYPEWLW L
Sbjct: 58 VFGANILKEGSDPKLQPDSEYPEWLWHL 85
>12_02_1208 - 27016400-27017176
Length = 258
Score = 30.7 bits (66), Expect = 0.25
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = +2
Query: 119 ASRIWIRRQSS-TGSG---CAPPACGGTINCAVSG 211
A+RIW R S G+G CA C G ++CAVSG
Sbjct: 71 AARIWPRTGCSFDGAGRGRCATGDCAGALSCAVSG 105
>12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001
Length = 676
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 89 CGASTRGLLLASRIWIRRQSSTGSGCAPPACG 184
C S L +AS W R ++ G GC ACG
Sbjct: 264 CAGSVDALHVASGAWARPRALPGGGCVVGACG 295
>11_01_0232 + 1794081-1795175,1796087-1796782
Length = 596
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 89 CGASTRGLLLASRIWIRRQSSTGSGCAPPACG 184
C S L +AS W R ++ G GC ACG
Sbjct: 264 CAGSVDALHVASGTWARPRALPGGGCVVGACG 295
>01_05_0346 +
21191542-21191783,21191988-21192072,21192159-21192422,
21192518-21192820,21193695-21193799,21193916-21194020,
21194613-21194712,21195614-21195933,21196183-21196359,
21196432-21196560,21196592-21196636,21196851-21197078
Length = 700
Score = 29.5 bits (63), Expect = 0.58
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 234 QTTRALELPETAQFIVPPHAGGAHPDPVLLCLRIQILDARSSPR-VEAPQ 88
+ +L LP + PPH A C R I AR++PR +EAPQ
Sbjct: 2 EAAASLPLPASRFLSPPPHPTPAAAAAAACCSRRNISCARAAPRALEAPQ 51
>05_04_0126 + 18252594-18256922
Length = 1442
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 225 RALELPETAQFIVPPHAGGAHPDPVLL 145
+ LEL E Q ++ P AG DPV+L
Sbjct: 1163 KELELKENEQLVLSPEAGTVSADPVIL 1189
>03_05_1011 +
29658144-29658310,29659531-29659676,29660526-29660602,
29660682-29660804,29661817-29661924,29661995-29662075,
29662157-29662309,29662469-29662540,29662745-29662863,
29662958-29663071,29663176-29663221,29664865-29664933,
29665662-29665808,29666410-29666706
Length = 572
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 164 TRIQYCFVSGSRSSMRGAAPVLRLHSHSGYS-LSGFILTSSPVVYMLEPH 18
T + Y FV RS G +L L G S SG + P+ Y+LEP+
Sbjct: 66 TELFYYFVESERSPSTGPV-ILWLTGGPGCSGFSGVVFEVGPMKYVLEPY 114
>03_02_0839 - 11653332-11653373,11653515-11653586,11653678-11654223
Length = 219
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 65 RTASTQSGCGASTRGLLLASRIWIRRQSSTGSGCAPPA 178
RT +G GA+ G +W Q +TG+G PA
Sbjct: 38 RTGGGGAGAGAAAAGRKTVDEVWRDIQGATGNGFLRPA 75
>02_01_0014 -
87215-87280,87358-87495,87593-87721,87801-87869,
87962-88042,88133-88237,88338-88568,88665-90197,
90660-90752,91477-92887,93184-93305,93479-93718,
94521-94682,94770-94937,95025-95141,95266-95376,
95919-96506
Length = 1787
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 187 SSACRRRAPGSSTALSPDPDPRCEEQPP 104
S + RRRA S++ DPDP + PP
Sbjct: 4 SPSSRRRARASASDKGKDPDPSSDPSPP 31
>01_06_0676 + 31101633-31102192,31102450-31102807,31103033-31103305
Length = 396
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 29 TYTRQVKMSR*SRTASTQSGCGASTRGLLLASRIWIRRQSSTGSGCAPP 175
T T+ + + + +TQS GA T G LL R RRQ G + P
Sbjct: 200 TATKIMDVLQRGGAVATQSIAGADTNGSLLCIRKHRRRQDDRSGGASGP 248
>12_02_1205 - 26982163-26982702
Length = 179
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 161 GCAPPACGGTINCAVSG 211
GCA CGG ++C++SG
Sbjct: 88 GCATGDCGGALSCSLSG 104
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 49 DVKIKPDSEYPEWLWSLNTGAAPRIEDLDPETKQYWIRVR 168
+V++ P E W AA E++DPETK +RVR
Sbjct: 93 EVRVVPAVERRRWR---RQAAAEEWEEIDPETKYRGVRVR 129
>01_06_0228 + 27708018-27708213,27708294-27708403
Length = 101
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 175 RRRAPGSSTALSPDP-DPRCEEQPPC*GSTATLGTRCPALS 56
R+R SS L P DPR PP G TAT G + A+S
Sbjct: 6 RKRGGSSSAKLPPHAEDPRAAPPPPQAGLTATDGGQEVAMS 46
>12_02_1206 - 26991624-26992172
Length = 182
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = +2
Query: 119 ASRIWIRRQSS-TGSG---CAPPACGGTINCAVSG 211
+ R+W R S G+G CA CGG ++C +SG
Sbjct: 70 SGRVWGRTGCSFDGAGRGRCATGDCGGALSCRLSG 104
>07_01_0368 +
2739908-2740320,2740437-2740816,2740893-2740977,
2741053-2741167,2741493-2741615
Length = 371
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/54 (22%), Positives = 25/54 (46%)
Frame = +1
Query: 46 EDVKIKPDSEYPEWLWSLNTGAAPRIEDLDPETKQYWIRVRAAGMRRNNKLRSL 207
+D+ ++ + +W S + A I + + W+R+ G+RRN + L
Sbjct: 232 DDLDLEASDTWEDWAVSFSFFALSLIRGMPVYENELWMRLYQLGVRRNKENEEL 285
>04_04_1681 + 35322992-35323765
Length = 257
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +2
Query: 119 ASRIWIRRQ---SSTGSG-CAPPACGGTINCAVSGSSKA 223
+ RIW R + G+G CA +CG + C SG++ A
Sbjct: 70 SGRIWGRTECDFDQAGNGSCATGSCGSELKCGGSGATPA 108
>01_06_1290 - 36023353-36024096
Length = 247
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +2
Query: 119 ASRIWIRRQSSTGSG----CAPPACGGTINCAVSGSS 217
+ RIW R TG+G CA CGG + CA G +
Sbjct: 75 SGRIWART-GCTGAGAQLHCATGDCGGRLQCAGLGGA 110
>11_06_0743 + 26847652-26849424
Length = 590
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -1
Query: 190 CSSACRR--RAPGSSTALSPDPDPRCEEQPPC*GSTATLGTRCP 65
CS CRR RAP SS+ P P+P P TA G P
Sbjct: 306 CSPRCRRRARAPPSSSTSPPWPEPAL----PAAARTAAAGRSLP 345
>12_02_1201 - 26946817-26947350
Length = 177
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = +2
Query: 119 ASRIWIRRQSS-TGSG---CAPPACGGTINCAVSG 211
+ R+W R S GSG CA C G ++C +SG
Sbjct: 68 SGRVWGRTGCSFDGSGRGSCATGDCAGALSCTLSG 102
>06_03_0797 - 24697241-24698278
Length = 345
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 5 WSTTYVAPTYTRQVKMSR*SRTASTQSGCGAS 100
WST +P+YT+ + T T+S CG S
Sbjct: 85 WSTYTYSPSYTKNKCAASTLPTVQTESKCGRS 116
>03_02_0272 - 7034043-7034800,7034884-7034923
Length = 265
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Frame = +2
Query: 119 ASRIWIRRQ---SSTGS-GCAPPACGGTINCAVSGS 214
+ R+W R S T S C CGG ++C++ G+
Sbjct: 77 SGRLWARTDCAPSGTASLACVTGDCGGAVSCSLGGA 112
>01_01_0248 + 2041015-2041762,2042112-2042149
Length = 261
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 137 RRQSSTGSGCAPPACGG 187
R Q G CAP ACGG
Sbjct: 17 RAQPVVGESCAPAACGG 33
>09_02_0335 + 7390307-7390777
Length = 156
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 82 EWLWSLNTGAAPRIEDLDPETKQYWIRVRAAGMRRNNKLRSL 207
E +W + A P++ + E W R AAG RR+ R L
Sbjct: 85 EGIWRQHGAARPQVATVWAEGGGVWRRRGAAGTRRSTWTRGL 126
>03_05_0584 - 25839566-25840255
Length = 229
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Frame = +2
Query: 125 RIWIRRQSS-TGSG---CAPPACGGTINCAVSG 211
R+W R S GSG C CGG + CA G
Sbjct: 65 RVWARTGCSFDGSGNGRCQTGDCGGVLRCAAYG 97
>02_04_0183 - 20723298-20724290
Length = 330
Score = 26.2 bits (55), Expect = 5.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 31 IYTTGEDVKIKPDSEYPEW 87
+YT V+ +PD+ +PEW
Sbjct: 121 LYTLLSSVRARPDASHPEW 139
>02_01_0393 - 2863335-2864534
Length = 399
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 187 SSACRRRAPGSSTALSPDPDPRCEEQPP 104
+SA RA SS AL P P P PP
Sbjct: 117 ASAAATRAYSSSAALVPSPAPASATTPP 144
>12_02_1202 - 26957254-26957778
Length = 174
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = +2
Query: 119 ASRIWIRRQSS---TGSG-CAPPACGGTINCAVSG 211
+ R+W R S G+G CA C G ++C +SG
Sbjct: 66 SGRVWGRTGCSFNGAGTGSCATGDCAGALSCTLSG 100
>12_02_0242 + 16213265-16213945,16216311-16216586,16217051-16217128
Length = 344
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 147 AVLDPGARRRHAEEQ*TAQSQEVLRPLLSVS 239
A L RRR + Q T ++E RPLL +S
Sbjct: 285 AALATARRRRRGQPQPTLAAEETARPLLFLS 315
>10_08_0435 +
17905728-17905901,17906608-17906931,17907205-17907321,
17908418-17908597,17909064-17909190,17909327-17909440,
17909794-17909909
Length = 383
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 205 DCAVYCSSACRRRAPGSSTALSPDPDPRCEEQPPC*GSTA 86
+C + +C + +STA+ P + QPP G TA
Sbjct: 76 ECGGMAARSCAQDERRASTAVKPRRERTAPSQPPSIGPTA 115
>10_02_0195 +
6578384-6578629,6578710-6579300,6586302-6587512,
6587593-6587844,6587932-6588042,6588133-6588214,
6588299-6588382,6588464-6588658
Length = 923
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -1
Query: 181 ACRRRAPGSSTALSPDPDPRCEEQPPC*GSTATLGTRCP 65
A RRR+ S+ + PD D P T T G CP
Sbjct: 84 ATRRRSKRSAVRVEPDSDTATSGSPQT--DTTTSGEACP 120
>03_05_0260 +
22468243-22468292,22469125-22469125,22469130-22469285,
22469416-22469919
Length = 236
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 190 CSSACRRRAPGSSTALSPDPDPRCEEQPPC 101
CS A +ST+ S D D + PPC
Sbjct: 174 CSGGSLTTATSTSTSSSTDSDGSLRQPPPC 203
>08_02_0536 -
18302394-18302826,18302903-18303183,18303480-18303747,
18303959-18303996,18304459-18304761
Length = 440
Score = 25.4 bits (53), Expect = 9.5
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Frame = +2
Query: 71 ASTQSGCGASTRGLLLASRIW----IRRQSSTGSGCAPPACGGTINCAVSGSSKAL 226
A G GA+ R +S I RR S G G CGG + AV K L
Sbjct: 36 AGAGPGAGAAERFAASSSSITDYLRYRRPGSAGGGGGTGVCGGELQTAVVRYEKRL 91
>06_03_0800 + 24709590-24710642
Length = 350
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 5 WSTTYVAPTYTRQVKMSR*SRTASTQSGCG 94
WST +P+YT+ + T T+S CG
Sbjct: 89 WSTYTYSPSYTKNKCAASTLPTVQTESKCG 118
>05_04_0120 - 18175292-18176206,18177315-18177785,18178562-18179635
Length = 819
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 140 SGSRSSMRGAAPVLRLHSHSGYSLSGFILTSSP 42
S S S++ A +L LHSH LS +LTS+P
Sbjct: 149 SSSLSTLLSTADLL-LHSHRLVRLSSRLLTSTP 180
>04_04_0057 + 22410167-22411330
Length = 387
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -1
Query: 163 PGSSTALSPDPD--PRCEEQPP 104
P ++ A SP P+ PRC+ PP
Sbjct: 188 PPAAAAASPSPERSPRCQPSPP 209
>04_01_0340 + 4435344-4435637
Length = 97
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -1
Query: 172 RRAPGSSTALSPDPDPRCEEQPPC*GSTATLGTRCPALS*HLHLS 38
R P S TA PDP P +P +TA PA + L LS
Sbjct: 3 RPDPSSVTAGRPDPSPATAGRPDPSPATAGRPDSSPATAGRLDLS 47
>03_02_0642 +
10086400-10086505,10086675-10087014,10087072-10087156,
10088679-10088764,10089154-10089331,10089425-10089624,
10089964-10090297
Length = 442
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 61 KPDSEYPEWLWSLNTGAAPRI 123
+PDS+Y W W L+ PR+
Sbjct: 130 RPDSDYLYWDWHLDDCLLPRL 150
>02_02_0442 - 10318576-10319109
Length = 177
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 175 RRRAPGSSTALSPDPDPRCEEQPP 104
RRR P +LSP+P +PP
Sbjct: 107 RRRRPSPPPSLSPEPSTAAVGEPP 130
>01_06_0088 + 26305326-26306372
Length = 348
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 202 CAVYCSSACRRRAPG 158
CA Y SACRR PG
Sbjct: 18 CAWYARSACRRLRPG 32
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,742,901
Number of Sequences: 37544
Number of extensions: 189826
Number of successful extensions: 806
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 388087168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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