Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30426
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.0  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.0  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 80  STNLPWIEKYRPQTF 124
           S+N PW E+Y+P ++
Sbjct: 69  SSNRPWWERYQPVSY 83


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 80  STNLPWIEKYRPQTF 124
           S+N PW E+Y+P ++
Sbjct: 70  SSNRPWWERYQPVSY 84


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 80  STNLPWIEKYRPQTF 124
           S+N PW E+Y+P ++
Sbjct: 70  SSNRPWWERYQPVSY 84


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 301  ASNDRGIDVVRNKIKMFAQQKVTLPPGR 384
            +SN+  I   R K   + QQ++++ P R
Sbjct: 1405 SSNNPSISAFRKKSLAYVQQRMSIAPNR 1432


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 301  ASNDRGIDVVRNKIKMFAQQKVTLPPGR 384
            +SN+  I   R K   + QQ++++ P R
Sbjct: 1405 SSNNPSISAFRKKSLAYVQQRMSIAPNR 1432


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +1

Query: 214 SWCWKNDDYTMLSAALLGVSFKDAVLELN 300
           ++C++ND+  +L  A   V FK  +  ++
Sbjct: 187 TYCFRNDNSEILKMATQLVDFKSVIRSIS 215


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -2

Query: 649 KTTALTPSSVYDR 611
           K  A+TPSS+YD+
Sbjct: 14  KFFAITPSSIYDK 26


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -2

Query: 712  PKPWAVDCRLFRADRKSPCA 653
            PK W VDC    A  KS  A
Sbjct: 1947 PKCWQVDCNKGPASDKSAFA 1966


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,188
Number of Sequences: 336
Number of extensions: 3743
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)