Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30426
(746 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0840 + 28570642-28570809,28570919-28571025,28571137-285712... 145 3e-35
12_01_0489 + 3872495-3872538,3872663-3872741,3872835-3872914,387... 86 3e-17
02_05_0922 - 32742863-32742958,32743081-32743136,32743253-327433... 63 2e-10
03_06_0267 - 32751431-32751489,32751600-32751645,32751886-327519... 47 2e-05
02_05_0449 - 29107310-29107377,29107732-29107777,29107860-291079... 44 1e-04
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 43 3e-04
12_01_0671 - 5702051-5702159,5702493-5703216,5703910-5704476,570... 37 0.015
08_01_0139 + 1105857-1107008,1107124-1107328,1107583-1107768,110... 36 0.045
11_02_0042 - 7672565-7672729,7672902-7672977,7673409-7674132,767... 35 0.060
05_06_0104 - 25603568-25603867,25603965-25604162,25604247-256045... 33 0.18
03_04_0140 + 17638335-17638583,17638843-17639061,17639206-176394... 33 0.32
03_02_0466 - 8690469-8690522,8691008-8691113,8691216-8691457,869... 33 0.32
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 33 0.32
03_02_0445 - 8551912-8552047,8552729-8552896,8553785-8554068,855... 32 0.42
07_03_0057 + 12872946-12873152,12873371-12873421,12876335-128764... 32 0.56
04_03_0784 - 19610370-19611548,19611830-19611919,19612001-196120... 32 0.56
10_08_1019 - 22299800-22299946,22300040-22300109,22300930-223010... 31 0.97
04_03_0687 + 18713603-18713962,18715318-18715539,18717068-187172... 31 0.97
02_04_0114 + 19879468-19880671,19882007-19882179,19882265-198826... 31 0.97
06_01_0369 + 2651192-2651862,2652103-2652158,2652816-2652874,265... 31 1.3
05_06_0166 + 26093618-26095381,26095820-26096039,26096345-260966... 31 1.3
02_02_0543 + 11360514-11361350,11361434-11361559,11361648-113619... 31 1.3
11_03_0031 - 9094643-9095824,9095945-9096034,9096141-9096216,909... 30 1.7
06_01_0400 + 2862684-2862872,2862956-2863170,2863298-2863448,286... 30 1.7
12_02_0529 - 20067974-20068588,20069982-20070048,20070156-200702... 29 3.0
11_03_0044 - 9198016-9199143,9199579-9199674,9199771-9199846,920... 29 3.0
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991... 29 3.0
07_01_0629 - 4695778-4696077,4696242-4696406,4696497-4696673,469... 29 3.0
01_05_0631 + 23835120-23836109,23836204-23836674 29 3.0
12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,709... 29 3.9
02_04_0067 - 19425019-19425288,19425393-19425647,19425766-194259... 29 3.9
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 29 5.2
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 29 5.2
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 29 5.2
02_04_0624 + 24538095-24538183,24538429-24538612,24538725-245388... 29 5.2
01_06_0595 - 30485460-30486097,30486721-30487179,30487339-304875... 29 5.2
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044... 29 5.2
01_05_0660 - 24071523-24071780,24071873-24072127,24072209-240723... 29 5.2
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621... 29 5.2
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 29 5.2
12_01_0833 - 7730761-7731030,7731171-7731425,7731565-7731736,773... 28 6.9
09_02_0569 - 10752756-10753164,10753229-10753644,10754149-107553... 28 6.9
06_03_1497 + 30585074-30586327 28 6.9
05_01_0446 - 3551754-3551795,3551932-3552397,3552424-3552921,355... 28 6.9
03_05_0169 + 21474655-21474771,21474879-21474971,21475553-214756... 28 6.9
03_02_0326 + 7474352-7474448,7474913-7474977,7475105-7475191,747... 28 6.9
03_01_0618 + 4543013-4543111,4544100-4544177,4544739-4544873,454... 28 6.9
02_03_0314 - 17600970-17600974,17601230-17601357,17601832-176019... 28 6.9
12_02_1267 - 27448871-27450445 28 9.1
09_02_0504 - 10013784-10014041,10014558-10014660,10014932-100150... 28 9.1
06_03_1259 - 28800954-28802468 28 9.1
06_03_1258 + 28796643-28798169 28 9.1
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 28 9.1
05_04_0355 - 20577189-20577275,20578001-20578129,20578252-205783... 28 9.1
04_04_1163 - 31398565-31398654,31398729-31398812,31398893-313990... 28 9.1
04_04_0251 + 23930789-23930960,23931065-23931128,23931641-239317... 28 9.1
02_04_0052 + 19271014-19271627,19272055-19272224,19272321-192725... 28 9.1
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 28 9.1
>04_04_0840 +
28570642-28570809,28570919-28571025,28571137-28571238,
28571786-28571981,28572691-28572819,28572869-28572895,
28572896-28573090,28573182-28573292
Length = 344
Score = 145 bits (352), Expect = 3e-35
Identities = 71/95 (74%), Positives = 81/95 (85%)
Frame = +1
Query: 226 KNDDYTMLSAALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILD 405
K L+ LLG S+++AVLELNAS+DRG+DVVRNKIKMFAQ+KVTL PGRHKIVILD
Sbjct: 63 KTTSILSLAHELLGPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIVILD 122
Query: 406 EADSMTDGAQQALRRTMELYSSTTRFALAANNSER 510
EADSMT GAQQALRRTME+YS+TTRFALA N S +
Sbjct: 123 EADSMTSGAQQALRRTMEIYSNTTRFALACNTSSK 157
Score = 98.3 bits (234), Expect = 6e-21
Identities = 42/79 (53%), Positives = 61/79 (77%)
Frame = +3
Query: 507 EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNN 686
+IIEPIQSRCA++R+SRLSD +IL +++ + E + Y EG+ A++FTA GD+R ALNN
Sbjct: 157 KIIEPIQSRCAIVRFSRLSDQEILGRLMIVVAAEKVPYVPEGLEAIIFTADGDMRQALNN 216
Query: 687 LQSTAQGFGHISPDNVFKV 743
LQ+T GF ++ +NVFK+
Sbjct: 217 LQATVSGFRFVNQENVFKL 235
Score = 79.4 bits (187), Expect = 3e-15
Identities = 33/63 (52%), Positives = 45/63 (71%)
Frame = +2
Query: 65 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
P + + ++PW+EKYRP D+ GN D V+RL A+ GN PN+I++GPPG GKTT+IL
Sbjct: 9 PDLADAYDIPWVEKYRPTRVADVGGNSDAVARLQDIARDGNMPNLILSGPPGTGKTTSIL 68
Query: 245 CLA 253
LA
Sbjct: 69 SLA 71
>12_01_0489 +
3872495-3872538,3872663-3872741,3872835-3872914,
3873888-3874007,3874090-3874159,3874238-3874311,
3874393-3874513,3874600-3874662,3874748-3874807,
3875156-3875281,3875358-3875441,3875912-3876010
Length = 339
Score = 85.8 bits (203), Expect = 3e-17
Identities = 49/85 (57%), Positives = 56/85 (65%), Gaps = 6/85 (7%)
Frame = +1
Query: 274 FKDAVLELNASNDRGIDVVRNKIKMFAQ------QKVTLPPGRHKIVILDEADSMTDGAQ 435
+K VLELNAS+DRGI+VVR KIK FA +K P +KI+ILDEADSMT+ AQ
Sbjct: 72 YKSRVLELNASDDRGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIILDEADSMTEDAQ 131
Query: 436 QALRRTMELYSSTTRFALAANNSER 510
ALRRTME YS TRF N R
Sbjct: 132 NALRRTMETYSKVTRFFFICNYISR 156
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +2
Query: 92 PWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLA-QLSSE 268
PW+EKYRP+ D+ E+ V L +T + P+++ GPPG GKTTT L +A QL
Sbjct: 10 PWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTALAIAYQLYGP 69
Query: 269 YLSKT 283
L K+
Sbjct: 70 ELYKS 74
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/68 (41%), Positives = 43/68 (63%)
Frame = +3
Query: 510 IIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNL 689
IIEP+ SRCA R+ LS+ + +++ ICN+E LS + ++ + + GDLR A+ L
Sbjct: 157 IIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDAQALATLSTISNGDLRRAITYL 216
Query: 690 QSTAQGFG 713
QS A+ FG
Sbjct: 217 QSAARLFG 224
>02_05_0922 -
32742863-32742958,32743081-32743136,32743253-32743382,
32743768-32743849,32744038-32744227,32744290-32744369,
32744769-32744985,32745740-32745923
Length = 344
Score = 63.3 bits (147), Expect = 2e-10
Identities = 45/102 (44%), Positives = 64/102 (62%), Gaps = 15/102 (14%)
Frame = +1
Query: 241 TMLSAA--LLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRH---KIVILD 405
T+L+ A L G + + +LELNAS++RGIDVVR +I+ FA + +L G K+V+LD
Sbjct: 87 TILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQDFASAR-SLSFGAKQSVKMVLLD 145
Query: 406 EADSMTDGAQQALRR----------TMELYSSTTRFALAANN 501
EAD+MT AQ ALRR +E ++ +TRFAL N+
Sbjct: 146 EADAMTKDAQFALRRATSSNLPHLTVIEKHTRSTRFALICNH 187
Score = 61.3 bits (142), Expect = 8e-10
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2
Query: 92 PWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQ 256
PW+EKYRPQ+ D+ + D V + P++++ GPPG GKT+TIL +A+
Sbjct: 39 PWVEKYRPQSLGDVAAHRDIVDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVAR 93
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/77 (33%), Positives = 42/77 (54%)
Frame = +3
Query: 507 EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNN 686
+II +QSRC R++ L + ++ I E L + G++A+V + GD+R ALN
Sbjct: 190 KIIPALQSRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNI 249
Query: 687 LQSTAQGFGHISPDNVF 737
LQST I+ + V+
Sbjct: 250 LQSTHMASKQITEEAVY 266
>03_06_0267 -
32751431-32751489,32751600-32751645,32751886-32751960,
32752045-32752114,32752288-32752386,32752505-32752641,
32753040-32753221,32753314-32753482,32753824-32753856,
32753958-32754068,32754184-32754295,32755592-32755727,
32756264-32756291
Length = 418
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +1
Query: 289 LELNASNDRGID---VVRNKIKMFAQQKVTLPPGRH--KIVILDEADSMTDGAQQALRRT 453
+E+N S D G VV+ IK A+ + G+ K+++L+E D ++ AQ +LRRT
Sbjct: 159 VEMNPS-DAGFQDRYVVQEVIKEMAKNRPIDAKGKRAFKVLVLNEVDKLSREAQHSLRRT 217
Query: 454 MELYSSTTRFALAANNSER 510
ME YS++ R L N+S +
Sbjct: 218 MEKYSASCRLILCCNSSSK 236
Score = 44.8 bits (101), Expect = 7e-05
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 95 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 250
W++KYRP+T D + ++ L + P+++ GP G GK T ++ L
Sbjct: 67 WVDKYRPKTLDKVTVHDQVAQNLKKLVAEQDCPHLLFYGPSGSGKKTLVMAL 118
>02_05_0449 -
29107310-29107377,29107732-29107777,29107860-29107934,
29108053-29108122,29108313-29108408,29108728-29108914,
29109001-29109169,29109614-29109646,29109731-29109841,
29110070-29111256,29112380-29112448,29114417-29114975,
29115455-29115589,29115714-29115896
Length = 995
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +2
Query: 77 KSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLA 253
++ L W +KYRP+T + + + +L T P+II GPPG GK++ LC A
Sbjct: 680 ENIRLFWADKYRPRTLGGFTCHREQIEQLKQLVSTEFCPHIIFKGPPGSGKSS--LCRA 736
>11_06_0143 +
20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 20/78 (25%)
Frame = +2
Query: 86 NLPWIEKYRPQTFDDIVGNEDTVSRLAVF--------------------AKTGNAPNIII 205
+L W EKYRP+ +DIVGN+ V +L + A +G +++
Sbjct: 396 SLQWTEKYRPKVPNDIVGNQSMVKQLHDWLRSWEDQFLHSGQKGKGKKQADSGAKKAVLL 455
Query: 206 AGPPGVGKTTTILCLAQL 259
+GPPG+GKTTT ++Q+
Sbjct: 456 SGPPGIGKTTTAKVVSQM 473
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +3
Query: 513 IEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNLQ 692
++ + + C +L + + + Q+ +++EI KE L E + + GD+R ALN+LQ
Sbjct: 571 LKSLVNYCLLLNFRKPTKQQMGKRLMEIAKKEGLQAQENAMEELAERVHGDIRMALNHLQ 630
>12_01_0671 -
5702051-5702159,5702493-5703216,5703910-5704476,
5704654-5704873,5705303-5707207
Length = 1174
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 101 EKYRPQTFDDIVGNEDTVSRLA-VFAKTGNAPNIIIAGPPGVGKTTT 238
+KYRP+ F +IVG L+ + AP + GP G GKT+T
Sbjct: 404 QKYRPKLFSEIVGQHIVAQSLSNAITREKIAPAYLFQGPRGTGKTST 450
Score = 35.9 bits (79), Expect = 0.034
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 528 SRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSA 677
SRC +S++ D I+ ++ IC KENL + + + G LR A
Sbjct: 564 SRCQKYVFSKIKDIDIVCRLRRICVKENLDVELAALDLIALNSDGSLRDA 613
>08_01_0139 +
1105857-1107008,1107124-1107328,1107583-1107768,
1107924-1108133,1108552-1109186
Length = 795
Score = 35.5 bits (78), Expect = 0.045
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 98 IEKYRPQTFDDIVGNEDTVSRLAVFAKTGN-APNIIIAGPPGVGKTT 235
++KYRP+ F ++ G L+ G AP + GP G+GKT+
Sbjct: 152 LQKYRPKAFSELAGQNVVAQSLSSAVLKGKLAPIYLFHGPHGIGKTS 198
>11_02_0042 -
7672565-7672729,7672902-7672977,7673409-7674132,
7674684-7674708,7675041-7675486,7676643-7676862,
7677609-7678459,7678697-7679555
Length = 1121
Score = 35.1 bits (77), Expect = 0.060
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 101 EKYRPQTFDDIVGNEDTVSRL-AVFAKTGNAPNIIIAGPPGVGKTT 235
+KYRP++F+++VG V L + AP + GP G GKT+
Sbjct: 339 QKYRPRSFNELVGQSFVVQSLNNAIIRERIAPAYLFHGPRGTGKTS 384
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 528 SRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSA 677
SRC +S++ D I+ ++ +I KENL + + + G LR A
Sbjct: 499 SRCQKYMFSKIKDIDIVCRLRKIAVKENLDVELAALDLIALNSDGSLRDA 548
>05_06_0104 -
25603568-25603867,25603965-25604162,25604247-25604526,
25604615-25605419,25605518-25606673
Length = 912
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 125 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQ 256
D ++G ++ + R+ N ++ G PGVGKT + LAQ
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQ 224
>03_04_0140 +
17638335-17638583,17638843-17639061,17639206-17639443,
17640614-17640809,17640888-17640942,17641495-17641645,
17642501-17642809,17642950-17643215,17643311-17644237,
17644386-17644712
Length = 978
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 110 RPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQ 256
R D ++G +D + R N ++ G PGVGKT LAQ
Sbjct: 256 RQGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQ 304
>03_02_0466 -
8690469-8690522,8691008-8691113,8691216-8691457,
8691477-8691546,8692224-8692499,8693058-8693137,
8693408-8693489,8693566-8693663,8693868-8693936,
8694015-8694113,8694681-8694737,8694874-8695039,
8695152-8695196,8695286-8695347,8695425-8695532,
8695719-8695769,8695843-8695944,8696362-8696448,
8696560-8696823,8696977-8697189,8697337-8697398,
8697517-8697849,8697943-8698138
Length = 973
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +1
Query: 286 VLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMELY 465
V+E+NAS+DR + KI Q + + K +++DE D + A+ E
Sbjct: 383 VVEINASDDRSASSIEPKILDVIQMNSIMSDSKPKCLVIDEIDGALGDGKGAVEINAEKN 442
Query: 466 SSTTRFALAANNSER 510
+S+ A + R
Sbjct: 443 NSSNSSTSAEDTQVR 457
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 140 NEDTVSRLAVFAKTGNAPN---IIIAGPPGVGKTT 235
+ED S T NAP +++ GPPG+GKTT
Sbjct: 336 SEDLTSSFNKRPTTDNAPEQKVLLLCGPPGLGKTT 370
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 65 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAK 178
P + T W+EKY P +F +++ +E T + ++ K
Sbjct: 237 PVTPLVTEQLWVEKYSPNSFTELLSDEHTNREVLLWLK 274
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +2
Query: 101 EKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQ 256
E R D ++G +D V R N +I G PGVGKT LAQ
Sbjct: 324 ELARRGKLDPVIGRDDEVRRCIQILCRRTKNNPVIIGEPGVGKTAIAEGLAQ 375
>03_02_0445 -
8551912-8552047,8552729-8552896,8553785-8554068,
8554143-8555386,8556901-8556967,8557059-8557150,
8557269-8557480,8558541-8558623,8559092-8559122,
8559770-8559951,8560557-8560616,8561092-8561289,
8561485-8561539,8562740-8562855,8563012-8563176,
8563310-8563483,8564134-8564333,8564778-8564882,
8565063-8565126,8566452-8566718
Length = 1300
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 47 EKKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAK 178
E +V P ++ NL W +KYRP+T + GN V L + K
Sbjct: 356 ELPEVTPKGCQTANL-WTDKYRPETAAQVCGNSKHVKFLNEWLK 398
>07_03_0057 +
12872946-12873152,12873371-12873421,12876335-12876480,
12876567-12876756
Length = 197
Score = 31.9 bits (69), Expect = 0.56
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 191 PNIIIAGPPGVGKTTTILCLA 253
PN+++ G PG GKTTT LA
Sbjct: 13 PNVLVTGTPGTGKTTTCSLLA 33
>04_03_0784 -
19610370-19611548,19611830-19611919,19612001-19612076,
19612917-19613134,19613333-19613548,19613974-19614159,
19614242-19614364,19614456-19614571,19615126-19615588
Length = 888
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 125 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQ 256
D +VG +D + R+ N + G PGVGKT LAQ
Sbjct: 238 DPVVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ 281
>10_08_1019 -
22299800-22299946,22300040-22300109,22300930-22301066,
22301142-22301195,22301638-22301694,22301814-22301846,
22301942-22302067,22302162-22302815,22303042-22303166,
22303770-22303935
Length = 522
Score = 31.1 bits (67), Expect = 0.97
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Frame = +2
Query: 95 WIEKYRPQTFDDIVGNEDTVSRL-------AVFAKTGNAPNIIIAGPPGVGKTTTILCL 250
W +KYRP +D + N+D L V A+ N +II GP VGK + + L
Sbjct: 290 WADKYRPNFLNDFICNKDAALELYNQGFTPQVTAQECN--HIIFEGPTSVGKRSMVSAL 346
>04_03_0687 +
18713603-18713962,18715318-18715539,18717068-18717256,
18717419-18717612,18718193-18718328
Length = 366
Score = 31.1 bits (67), Expect = 0.97
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 95 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 250
W ++ + +D + + D S L+ +T +I GP GVGK++ I L
Sbjct: 125 WRDRMKSWGYDPLFLSVDQKSGLSALEETLEGQTTVIVGPSGVGKSSLINAL 176
>02_04_0114 +
19879468-19880671,19882007-19882179,19882265-19882605,
19882698-19882977,19883070-19883267,19883380-19883652
Length = 822
Score = 31.1 bits (67), Expect = 0.97
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 125 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQ 256
D ++G +D V R+ + ++ G PGVGKT LA+
Sbjct: 196 DPVIGRDDEVDRVVCILCRRTKNSAVLVGAPGVGKTAIAEGLAR 239
>06_01_0369 +
2651192-2651862,2652103-2652158,2652816-2652874,
2653094-2653165,2653356-2653439,2654522-2654629,
2655543-2655605,2655733-2655813,2656316-2656421,
2657111-2657244,2657753-2657830,2658462-2658500,
2658673-2658755,2659228-2659300,2659842-2660012
Length = 625
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQLSSE 268
I++ G PGVGK++ IL LA + SE
Sbjct: 246 ILVGGDPGVGKSSLILQLASIMSE 269
>05_06_0166 +
26093618-26095381,26095820-26096039,26096345-26096674,
26097481-26098029,26098366-26098426,26099737-26099824,
26100240-26100299
Length = 1023
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 101 EKYRPQTFDDIVGNEDTVSRLA-VFAKTGNAPNIIIAGPPGVGKTT 235
+KY P+TF D++G V L+ K + GP G GKT+
Sbjct: 358 QKYSPKTFKDMIGQSLVVQALSNAILKRKIGLVYVFYGPHGTGKTS 403
>02_02_0543 +
11360514-11361350,11361434-11361559,11361648-11361976,
11362078-11362861
Length = 691
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 125 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQ 256
D +VG E+ + R+ + + ++ G GVGKT LAQ
Sbjct: 70 DPVVGREEEIDRVVCILSRKSKNSAVLVGAAGVGKTAIAEGLAQ 113
>11_03_0031 -
9094643-9095824,9095945-9096034,9096141-9096216,
9096759-9096976,9097283-9097512,9097617-9097683,
9097863-9098048,9098164-9098295,9098380-9098492,
9098771-9098777
Length = 766
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 125 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQ 256
D +VG ++ V R+ N + G PGVGKT LAQ
Sbjct: 88 DPVVGRQNQVDRVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ 131
>06_01_0400 +
2862684-2862872,2862956-2863170,2863298-2863448,
2863566-2863757,2864471-2864633,2864754-2864989,
2865446-2865622,2865707-2865826,2865939-2866241
Length = 581
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2
Query: 194 NIIIAGPPGVGKTTTILCLAQLSSE 268
++++ GPPGVGKTT I +A++ ++
Sbjct: 119 SLLLIGPPGVGKTTVIREIARMLAD 143
>12_02_0529 -
20067974-20068588,20069982-20070048,20070156-20070264,
20070357-20070402,20070501-20070636,20070745-20070866,
20070944-20071306,20071914-20072043,20072129-20072202,
20072620-20072709,20072836-20072875,20073047-20073117,
20074248-20074277
Length = 630
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +2
Query: 182 GNAPNIIIAGPPGVGKTTTILCLAQLSSEYLSK 280
G P I+I+GP GVGK T I A+L EY SK
Sbjct: 173 GQKP-IVISGPSGVGKGTLI---AKLMKEYPSK 201
>11_03_0044 -
9198016-9199143,9199579-9199674,9199771-9199846,
9200330-9200547,9200703-9200918,9201336-9201521,
9201607-9201708,9201828-9202495,9203248-9203314
Length = 918
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 125 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQL 259
D +VG + + + N + G PGVGKT LAQL
Sbjct: 283 DPVVGRQKQIDHVVQILSRRTKNNPCLIGEPGVGKTAIAEGLAQL 327
>09_02_0499 -
9917891-9918148,9918240-9918494,9918769-9918940,
9919056-9919283,9919628-9919761,9919842-9919925,
9920007-9920297,9920569-9920901,9921029-9921171,
9921266-9921379,9921470-9921626,9921709-9921812,
9921914-9922074,9922158-9922474,9922574-9922855,
9923205-9923506,9923603-9923693,9923864-9923917,
9924052-9924128,9924213-9924372,9924473-9924557,
9924635-9924723,9925791-9925925
Length = 1341
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 200 IIAGPPGVGKTTTILCLA 253
++ GPPG GKTT +L LA
Sbjct: 78 LLLGPPGAGKTTLLLALA 95
>07_01_0629 -
4695778-4696077,4696242-4696406,4696497-4696673,
4697157-4697455,4697589-4697751,4697897-4698088,
4698211-4698385,4698527-4698741,4698948-4699385
Length = 707
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 194 NIIIAGPPGVGKTTTI 241
+I++ GPPGVGKTT I
Sbjct: 202 SILVIGPPGVGKTTLI 217
>01_05_0631 + 23835120-23836109,23836204-23836674
Length = 486
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +2
Query: 74 SKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNA--PNIIIAGPPGVGKTTTILC 247
S T L K + DD+ E + R + K G A ++ GPPG GK++ I
Sbjct: 209 STFTTLAMDHKQKQSVMDDL---ERFIKRKEYYKKIGKAWKRGYLLYGPPGTGKSSLIAA 265
Query: 248 LA 253
+A
Sbjct: 266 MA 267
>12_01_0777 -
7095081-7096259,7096636-7096725,7096827-7096902,
7097150-7097367,7097502-7097717,7097922-7098107,
7098181-7098303,7098399-7098514,7099254-7099832,
7101485-7101517,7102485-7103679,7103732-7103797,
7104843-7104905,7105328-7105411
Length = 1407
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 125 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQ 256
D +VG + + R+ N + G PGVGKT LAQ
Sbjct: 757 DPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ 800
>02_04_0067 -
19425019-19425288,19425393-19425647,19425766-19425937,
19426069-19426302,19426523-19426656,19427663-19427746,
19428355-19428645,19428788-19429120,19429317-19429390,
19429464-19429644,19429993-19430096,19430232-19430392,
19430727-19431040,19431583-19431864,19432431-19432732,
19433176-19433266,19433368-19433421,19438917-19438993,
19439081-19439240,19439410-19439494,19439574-19440130
Length = 1404
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 200 IIAGPPGVGKTTTILCLA 253
++ GPPG GKTT +L LA
Sbjct: 189 LLLGPPGCGKTTLLLALA 206
>08_02_0520 -
18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 200 IIAGPPGVGKTTTILCLA 253
++ GPPG GKTT +L LA
Sbjct: 232 LLLGPPGSGKTTLLLALA 249
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +2
Query: 170 FAKTGNAP--NIIIAGPPGVGKTTTI-LCLAQLSSEYL 274
F K G P +++ GPPG GKT C AQ ++ +L
Sbjct: 188 FQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFL 225
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +2
Query: 170 FAKTGNAP--NIIIAGPPGVGKTTTI-LCLAQLSSEYL 274
F K G P +++ GPPG GKT C AQ ++ +L
Sbjct: 191 FQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFL 228
>02_04_0624 +
24538095-24538183,24538429-24538612,24538725-24538886,
24538988-24539225,24539301-24539370,24539439-24539530,
24539799-24539836,24540018-24540039,24540462-24540618,
24540702-24540753,24542144-24542207,24542279-24542362,
24543418-24543543,24543622-24543818,24543903-24544091,
24544186-24544434,24544507-24544556,24544977-24545059,
24545164-24545449,24545751-24545794,24545878-24546626
Length = 1074
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 194 NIIIAGPPGVGKTTTI-LCLAQLSSEYLS 277
N++I+ P G GKT LC+ +L S +LS
Sbjct: 49 NMVISAPTGSGKTVLFELCILRLLSRFLS 77
>01_06_0595 -
30485460-30486097,30486721-30487179,30487339-30487558,
30488229-30489980
Length = 1022
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 101 EKYRPQTFDDIVGNEDTVSRLA-VFAKTGNAPNIIIAGPPGVGKTT 235
+K+ P+TF D+VG V L+ + + GP G GKT+
Sbjct: 354 QKFAPKTFKDVVGQSLVVQALSNAVLRRKIGLVYVFYGPHGTGKTS 399
>01_05_0662 -
24103475-24103735,24103831-24104085,24104280-24104451,
24104535-24104762,24104864-24104997,24105101-24105184,
24105273-24105563,24105660-24105992,24106081-24106334,
24106435-24106591,24106674-24106777,24106879-24107039,
24107216-24107529,24107614-24107895,24107991-24108292,
24108367-24108457,24108566-24108619,24108785-24108861,
24108963-24109207,24109322-24109410,24110811-24111254
Length = 1443
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 200 IIAGPPGVGKTTTILCLA 253
++ GPPG GKTT +L LA
Sbjct: 181 LLLGPPGSGKTTLLLALA 198
>01_05_0660 -
24071523-24071780,24071873-24072127,24072209-24072380,
24072458-24072685,24072785-24072918,24073005-24073088,
24073231-24073521,24073599-24073931,24074016-24074266,
24074354-24074620,24074707-24074867,24074978-24075294,
24075386-24075667,24075753-24076054,24076147-24076237,
24076326-24076379,24076497-24076573,24076700-24076859,
24077129-24077213,24077421-24077630,24077736-24078097
Length = 1457
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 200 IIAGPPGVGKTTTILCLA 253
++ GPPG GKTT +L LA
Sbjct: 194 LLLGPPGSGKTTLLLALA 211
>01_05_0659 -
24061318-24061575,24061664-24061918,24062001-24062172,
24062258-24062381,24062442-24062485,24063601-24063734,
24063822-24063905,24064100-24064390,24064713-24065045,
24065145-24065389,24065644-24065910,24065997-24066157,
24066253-24066569,24066665-24066946,24067024-24067325,
24067398-24067488,24067796-24067849,24067963-24068039,
24068159-24068318,24068653-24068737,24069029-24069238,
24069344-24069732
Length = 1444
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 200 IIAGPPGVGKTTTILCLA 253
++ GPPG GKTT +L LA
Sbjct: 203 LLLGPPGSGKTTLLLALA 220
>01_03_0179 +
13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 200 IIAGPPGVGKTTTILCLA 253
++ GPPG GKTT +L LA
Sbjct: 233 LLLGPPGSGKTTLLLALA 250
>12_01_0833 -
7730761-7731030,7731171-7731425,7731565-7731736,
7731873-7732106,7732362-7732495,7734116-7734199,
7735086-7735376,7735566-7735898,7736351-7736424,
7736558-7736653,7736876-7737029,7737118-7737221,
7737325-7737485,7737774-7738087,7738950-7739231,
7739909-7740210,7740513-7740713,7740924-7741014,
7741424-7741500,7741595-7741754,7742026-7742110,
7742194-7742288
Length = 1322
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 200 IIAGPPGVGKTTTILCLAQLSSEYLSKT 283
++ GPPG GKTT + LA ++ L +T
Sbjct: 35 LLLGPPGCGKTTLLKALAGRLNKSLKET 62
>09_02_0569 -
10752756-10753164,10753229-10753644,10754149-10755349,
10756770-10756991,10757615-10757767,10757883-10758034,
10758142-10758222,10758353-10758598,10759394-10759516
Length = 1000
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +2
Query: 50 KKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGK 229
KK+ + ++LP + + P IVG ++ ++ K G I I G G GK
Sbjct: 430 KKRAPENDGMFSSLPLVGREMPLP-PYIVGQDEYKDKIVGSIKQGTTGTIGICGMGGSGK 488
Query: 230 TTTILCLAQLSS 265
TT + L + S
Sbjct: 489 TTLLKQLNNIFS 500
>06_03_1497 + 30585074-30586327
Length = 417
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLA-QLSSEYLS 277
I+I+GP G GKT L LA +LS E +S
Sbjct: 28 IVISGPTGAGKTRLALDLAKRLSGEIIS 55
>05_01_0446 -
3551754-3551795,3551932-3552397,3552424-3552921,
3553288-3553334
Length = 350
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = -3
Query: 276 ERYSEESCA-KHSIVVVFPTPGGPA--IIMLGALPVLAKTAKRDTVSSLPTISSKVCGLY 106
E E C +H + + P P +++LG P +++A TVS + +C
Sbjct: 231 ENQRTEYCRFEHPPIPIAPRPPRTMEEVVLLGWPPQRSESASTGTVSFIGRTYDMICTED 290
Query: 105 FSIHGKFVDLLELGFTC 55
++ G + L+E G C
Sbjct: 291 SNVKGYTMKLMESGLVC 307
>03_05_0169 +
21474655-21474771,21474879-21474971,21475553-21475642,
21475728-21475811,21476088-21476252,21476995-21477182,
21477363-21477435,21477766-21477819,21478019-21478276,
21478891-21479097,21479293-21479396,21479809-21479953,
21480108-21480242,21480610-21480783
Length = 628
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 200 IIAGPPGVGKTTTIL 244
++ GPPG GKTTTI+
Sbjct: 198 LLHGPPGTGKTTTII 212
>03_02_0326 +
7474352-7474448,7474913-7474977,7475105-7475191,
7475393-7475440,7476086-7476142,7476588-7476687,
7476875-7477185,7477298-7477667,7478745-7478876,
7479362-7479575,7479650-7479710,7480098-7480292
Length = 578
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +3
Query: 585 VIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNLQ 692
++ IC +E T++ V + ++ GD+R A+ +LQ
Sbjct: 270 LVRICKQEGSDLTDDLVHQIATSSGGDIRHAIMSLQ 305
>03_01_0618 +
4543013-4543111,4544100-4544177,4544739-4544873,
4544971-4545078,4545397-4545525,4546191-4546306,
4546392-4546509,4547274-4547379,4547492-4547631,
4547735-4547905,4547984-4548094,4548206-4548317,
4548615-4548943,4549064-4549154,4549542-4549637,
4549710-4549780,4549868-4549980,4550353-4550434
Length = 734
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = -2
Query: 415 CPLHLV----SLFYVDQVAK*PFVAQTFLSYSGRHLY 317
CP+HL S ++ VA P + LSYSG H+Y
Sbjct: 254 CPMHLADTRKSNLHLTHVAFSPNGKEVLLSYSGEHVY 290
>02_03_0314 -
17600970-17600974,17601230-17601357,17601832-17601924,
17602145-17602257,17602520-17602627,17602724-17602828,
17603185-17603355,17603474-17603652,17603741-17603969,
17604841-17604955,17605137-17605312,17606060-17606143,
17606463-17606630,17607011-17607097,17607201-17607323
Length = 627
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 191 PNIIIAGPPGVGKTTTILCL 250
P +I GP G GKTT I CL
Sbjct: 28 PLTLIVGPNGAGKTTIIECL 47
>12_02_1267 - 27448871-27450445
Length = 524
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +2
Query: 170 FAKTGNA--PNIIIAGPPGVGKTTTILCLA 253
+AK G A ++ GPPG GK+T I +A
Sbjct: 236 YAKVGKAWKRGYLLHGPPGTGKSTMIAAMA 265
>09_02_0504 -
10013784-10014041,10014558-10014660,10014932-10015093,
10015416-10015549,10015633-10015716,10015839-10016129,
10016362-10016694,10016823-10016965,10017273-10017429,
10017513-10017616,10017728-10017888,10017971-10018287,
10018396-10018677,10018759-10019226,10019338-10019391,
10019689-10019742,10019943-10020021,10020108-10020196,
10021153-10021273,10022321-10022637
Length = 1236
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 200 IIAGPPGVGKTTTILCLAQLSS 265
++ GPPG GKT+ +L LA S+
Sbjct: 179 LLLGPPGSGKTSLLLALAGTST 200
>06_03_1259 - 28800954-28802468
Length = 504
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 170 FAKTGNA--PNIIIAGPPGVGKTTTILCLAQL 259
+A+ G A ++ GPPG GKT+ + +A L
Sbjct: 247 YARVGRAWKRGYLLHGPPGTGKTSLVAAIANL 278
>06_03_1258 + 28796643-28798169
Length = 508
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 170 FAKTGNA--PNIIIAGPPGVGKTTTILCLAQL 259
+A+ G A ++ GPPG GKT+ + +A L
Sbjct: 256 YARAGRAWKRGYLLHGPPGTGKTSLVAAIANL 287
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 271 SFKDAVLELNASNDRGID-VVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQ 438
S + L LN +ND I+ ++ +I + + + G+H +VIL + S D ++
Sbjct: 270 SMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALRE 326
>05_04_0355 -
20577189-20577275,20578001-20578129,20578252-20578371,
20578505-20578741,20578983-20579258,20579375-20579508,
20580006-20581632
Length = 869
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = -3
Query: 171 KTAKRDTVSSLPTISSKVCGLYFSIHGKFVDLLELGFTCF 52
++ + +TV+ + + +VC + +HG+ + L +G CF
Sbjct: 258 RSRREETVALIRNVGMEVCEAFMGLHGEGLVLGCIGLGCF 297
>04_04_1163 -
31398565-31398654,31398729-31398812,31398893-31399037,
31399118-31399239,31399338-31399376,31399491-31399601,
31399682-31399804,31399946-31400032,31400136-31400207,
31400349-31400621,31400704-31400895,31400988-31401171,
31401339-31401480,31401578-31401821,31401959-31402603,
31403024-31403293
Length = 940
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 AKTGNAPNIIIAGPPGVGKTTTILCLA-QLSSEYLS 277
+K G +++ GPPG GKT +A + S +LS
Sbjct: 685 SKLGKRSGVLLYGPPGTGKTLLAKAVATECSLNFLS 720
>04_04_0251 +
23930789-23930960,23931065-23931128,23931641-23931747,
23931832-23931899,23932068-23932097,23932357-23932460,
23932558-23932662,23932815-23932904,23932982-23933057,
23933292-23933361,23933799-23933869,23933945-23934035,
23934192-23934319,23934547-23934675,23934762-23934902
Length = 481
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQ-LSSEYLSK 280
+++ GPPG GKT+ LAQ LS + S+
Sbjct: 219 VLLHGPPGTGKTSLCKALAQKLSIRFKSR 247
>02_04_0052 +
19271014-19271627,19272055-19272224,19272321-19272550,
19272657-19272765,19272858-19272985,19273102-19273203,
19273285-19273566,19273660-19273769,19273851-19274145,
19274242-19274475,19274705-19274935,19275167-19275478
Length = 938
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 125 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKT 232
D I+G E+ + R+ N I+ G GVGKT
Sbjct: 283 DPIIGREEEIERVVQIICRRTKNNPILLGEAGVGKT 318
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 271 SFKDAVLELNASNDRGID-VVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQ 438
S + L LN +ND I+ ++ +I + + + G+H +VIL + S D ++
Sbjct: 240 SMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALRE 296
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,263,965
Number of Sequences: 37544
Number of extensions: 391349
Number of successful extensions: 1317
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1314
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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