Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30426
(746 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-... 153 6e-37
AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C su... 153 6e-37
AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein. 153 6e-37
BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C (a... 118 2e-26
BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C (a... 118 2e-26
AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C (a... 118 2e-26
AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein. 118 2e-26
M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-... 85 3e-16
CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein. 85 3e-16
BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C (a... 85 3e-16
BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C (a... 85 3e-16
BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C (a... 85 3e-16
AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C (a... 85 3e-16
L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-... 81 5e-15
CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein. 81 5e-15
BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C (a... 81 5e-15
BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C (a... 81 5e-15
AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C (a... 81 5e-15
AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5 ... 81 5e-15
L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-... 51 5e-06
BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C (a... 51 5e-06
BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C (a... 51 5e-06
AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C (a... 51 5e-06
AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3 ... 51 5e-06
AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C (a... 51 5e-06
BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein pr... 43 0.001
BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe... 43 0.001
AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe... 43 0.001
AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein. 43 0.001
AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint p... 43 0.001
AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint p... 43 0.001
AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint p... 43 0.001
AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein. 43 0.001
AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolo... 43 0.001
AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein prot... 43 0.001
AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint p... 43 0.001
BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase interac... 40 0.013
AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase interac... 40 0.013
AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase interac... 40 0.013
AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase interac... 40 0.013
AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase interac... 40 0.013
AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL... 40 0.013
AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase interac... 40 0.013
AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase interac... 37 0.088
AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility as... 35 0.27
AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens ... 35 0.27
AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protei... 35 0.27
AY072792-1|AAL68396.1| 994|Homo sapiens PAAD and NACHT-containi... 33 1.1
AK056688-1|BAB71254.1| 919|Homo sapiens protein ( Homo sapiens ... 33 1.1
AF482706-1|AAL88672.1| 916|Homo sapiens ribonuclease inhibitor ... 33 1.1
AF479747-1|AAL87104.1| 994|Homo sapiens PYRIN-containing APAF1-... 33 1.1
AF442488-1|AAL35293.1| 994|Homo sapiens NALP4 protein. 33 1.1
BC018184-1|AAH18184.1| 975|Homo sapiens CTF18, chromosome trans... 33 1.4
BC006437-1|AAH06437.1| 1016|Homo sapiens CHTF18 protein protein. 33 1.4
BC006278-1|AAH06278.2| 975|Homo sapiens CTF18, chromosome trans... 33 1.4
AL031033-2|CAB53056.1| 260|Homo sapiens protein ( Human DNA seq... 33 1.4
AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with holl... 33 1.4
Y18418-1|CAB46271.1| 456|Homo sapiens erythrocyte cytosolic pro... 32 1.9
DQ469310-1|ABF13334.1| 386|Homo sapiens RUVBL1-FK protein. 32 1.9
BT007057-1|AAP35706.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 32 1.9
BC012886-1|AAH12886.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 32 1.9
BC002993-1|AAH02993.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 32 1.9
AK222575-1|BAD96295.1| 456|Homo sapiens TATA binding protein in... 32 1.9
AK222563-1|BAD96283.1| 456|Homo sapiens TATA binding protein in... 32 1.9
AJ010058-1|CAA08986.1| 456|Homo sapiens Nuclear matrix protein ... 32 1.9
AF380344-1|AAM45570.1| 456|Homo sapiens pontin 52 protein. 32 1.9
AF099084-1|AAD04427.1| 456|Homo sapiens Pontin52 protein. 32 1.9
AF070735-1|AAC77819.1| 456|Homo sapiens RuvB-like protein RUVBL... 32 1.9
AB012122-1|BAA28169.1| 456|Homo sapiens TIP49 protein. 32 1.9
L24544-1|AAA70430.1| 993|Homo sapiens DNA helicase protein. 31 3.3
BC025299-1|AAH25299.1| 868|Homo sapiens Unknown (protein for IM... 31 3.3
BC050576-1|AAH50576.1| 479|Homo sapiens chromosome 9 open readi... 31 4.4
BC050326-1|AAH50326.1| 994|Homo sapiens NLR family, pyrin domai... 31 4.4
BC034776-1|AAH34776.1| 479|Homo sapiens chromosome 9 open readi... 31 4.4
AL445645-1|CAH72109.1| 479|Homo sapiens chromosome 9 open readi... 31 4.4
AL160165-5|CAH70535.1| 479|Homo sapiens chromosome 9 open readi... 31 4.4
AK057266-1|BAB71402.1| 479|Homo sapiens protein ( Homo sapiens ... 31 4.4
L14754-1|AAA53082.1| 993|Homo sapiens DNA-binding protein protein. 31 5.8
BC105090-1|AAI05091.1| 993|Homo sapiens immunoglobulin mu bindi... 31 5.8
BC105088-1|AAI05089.1| 993|Homo sapiens immunoglobulin mu bindi... 31 5.8
BC000290-1|AAH00290.1| 868|Homo sapiens IGHMBP2 protein protein. 31 5.8
>M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-kDa
subunit protein.
Length = 354
Score = 153 bits (371), Expect = 6e-37
Identities = 75/95 (78%), Positives = 82/95 (86%)
Frame = +1
Query: 226 KNDDYTMLSAALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILD 405
K L+ ALLG + KDA+LELNASNDRGIDVVRNKIKMFAQQKVTLP GRHKI+ILD
Sbjct: 82 KTTSILCLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILD 141
Query: 406 EADSMTDGAQQALRRTMELYSSTTRFALAANNSER 510
EADSMTDGAQQALRRTME+YS TTRFALA N S++
Sbjct: 142 EADSMTDGAQQALRRTMEIYSKTTRFALACNASDK 176
Score = 118 bits (284), Expect = 2e-26
Identities = 51/80 (63%), Positives = 68/80 (85%)
Frame = +3
Query: 507 EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNN 686
+IIEPIQSRCAVLRY++L+DAQIL +++ + KE + YT++G+ A++FTAQGD+R ALNN
Sbjct: 176 KIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNN 235
Query: 687 LQSTAQGFGHISPDNVFKVC 746
LQST GFG I+ +NVFKVC
Sbjct: 236 LQSTFSGFGFINSENVFKVC 255
Score = 101 bits (243), Expect = 2e-21
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = +2
Query: 65 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
P S+ LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL
Sbjct: 28 PGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL 87
Query: 245 CLAQ 256
CLA+
Sbjct: 88 CLAR 91
>AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C
subunit 2 protein.
Length = 354
Score = 153 bits (371), Expect = 6e-37
Identities = 75/95 (78%), Positives = 82/95 (86%)
Frame = +1
Query: 226 KNDDYTMLSAALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILD 405
K L+ ALLG + KDA+LELNASNDRGIDVVRNKIKMFAQQKVTLP GRHKI+ILD
Sbjct: 82 KTTSILCLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILD 141
Query: 406 EADSMTDGAQQALRRTMELYSSTTRFALAANNSER 510
EADSMTDGAQQALRRTME+YS TTRFALA N S++
Sbjct: 142 EADSMTDGAQQALRRTMEIYSKTTRFALACNASDK 176
Score = 118 bits (284), Expect = 2e-26
Identities = 51/80 (63%), Positives = 68/80 (85%)
Frame = +3
Query: 507 EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNN 686
+IIEPIQSRCAVLRY++L+DAQIL +++ + KE + YT++G+ A++FTAQGD+R ALNN
Sbjct: 176 KIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNN 235
Query: 687 LQSTAQGFGHISPDNVFKVC 746
LQST GFG I+ +NVFKVC
Sbjct: 236 LQSTFSGFGFINSENVFKVC 255
Score = 101 bits (243), Expect = 2e-21
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = +2
Query: 65 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
P S+ LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL
Sbjct: 28 PGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL 87
Query: 245 CLAQ 256
CLA+
Sbjct: 88 CLAR 91
>AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein.
Length = 354
Score = 153 bits (371), Expect = 6e-37
Identities = 75/95 (78%), Positives = 82/95 (86%)
Frame = +1
Query: 226 KNDDYTMLSAALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILD 405
K L+ ALLG + KDA+LELNASNDRGIDVVRNKIKMFAQQKVTLP GRHKI+ILD
Sbjct: 82 KTTSILCLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILD 141
Query: 406 EADSMTDGAQQALRRTMELYSSTTRFALAANNSER 510
EADSMTDGAQQALRRTME+YS TTRFALA N S++
Sbjct: 142 EADSMTDGAQQALRRTMEIYSKTTRFALACNASDK 176
Score = 118 bits (284), Expect = 2e-26
Identities = 51/80 (63%), Positives = 68/80 (85%)
Frame = +3
Query: 507 EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNN 686
+IIEPIQSRCAVLRY++L+DAQIL +++ + KE + YT++G+ A++FTAQGD+R ALNN
Sbjct: 176 KIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNN 235
Query: 687 LQSTAQGFGHISPDNVFKVC 746
LQST GFG I+ +NVFKVC
Sbjct: 236 LQSTFSGFGFINSENVFKVC 255
Score = 101 bits (243), Expect = 2e-21
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = +2
Query: 65 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
P S+ LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL
Sbjct: 28 PGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL 87
Query: 245 CLAQ 256
CLA+
Sbjct: 88 CLAR 91
>BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 118 bits (284), Expect = 2e-26
Identities = 51/80 (63%), Positives = 68/80 (85%)
Frame = +3
Query: 507 EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNN 686
+IIEPIQSRCAVLRY++L+DAQIL +++ + KE + YT++G+ A++FTAQGD+R ALNN
Sbjct: 142 KIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNN 201
Query: 687 LQSTAQGFGHISPDNVFKVC 746
LQST GFG I+ +NVFKVC
Sbjct: 202 LQSTFSGFGFINSENVFKVC 221
Score = 101 bits (243), Expect = 2e-21
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = +2
Query: 65 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
P S+ LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL
Sbjct: 28 PGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL 87
Query: 245 CLAQ 256
CLA+
Sbjct: 88 CLAR 91
Score = 59.3 bits (137), Expect = 1e-08
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +1
Query: 412 DSMTDGAQQALRRTMELYSSTTRFALAANNSER 510
DSMTDGAQQALRRTME+YS TTRFALA N S++
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDK 142
Score = 35.9 bits (79), Expect = 0.15
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 226 KNDDYTMLSAALLGVSFKDAVLELNASNDRGIDVVRNKIK 345
K L+ ALLG + KDA+LELNASND D + ++
Sbjct: 82 KTTSILCLARALLGPALKDAMLELNASNDSMTDGAQQALR 121
>BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 118 bits (284), Expect = 2e-26
Identities = 51/80 (63%), Positives = 68/80 (85%)
Frame = +3
Query: 507 EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNN 686
+IIEPIQSRCAVLRY++L+DAQIL +++ + KE + YT++G+ A++FTAQGD+R ALNN
Sbjct: 142 KIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNN 201
Query: 687 LQSTAQGFGHISPDNVFKVC 746
LQST GFG I+ +NVFKVC
Sbjct: 202 LQSTFSGFGFINSENVFKVC 221
Score = 101 bits (243), Expect = 2e-21
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = +2
Query: 65 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
P S+ LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL
Sbjct: 28 PGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL 87
Query: 245 CLAQ 256
CLA+
Sbjct: 88 CLAR 91
Score = 59.3 bits (137), Expect = 1e-08
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +1
Query: 412 DSMTDGAQQALRRTMELYSSTTRFALAANNSER 510
DSMTDGAQQALRRTME+YS TTRFALA N S++
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDK 142
Score = 35.9 bits (79), Expect = 0.15
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 226 KNDDYTMLSAALLGVSFKDAVLELNASNDRGIDVVRNKIK 345
K L+ ALLG + KDA+LELNASND D + ++
Sbjct: 82 KTTSILCLARALLGPALKDAMLELNASNDSMTDGAQQALR 121
>AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C
(activator 1) 2 (40kD) protein.
Length = 320
Score = 118 bits (284), Expect = 2e-26
Identities = 51/80 (63%), Positives = 68/80 (85%)
Frame = +3
Query: 507 EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNN 686
+IIEPIQSRCAVLRY++L+DAQIL +++ + KE + YT++G+ A++FTAQGD+R ALNN
Sbjct: 142 KIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNN 201
Query: 687 LQSTAQGFGHISPDNVFKVC 746
LQST GFG I+ +NVFKVC
Sbjct: 202 LQSTFSGFGFINSENVFKVC 221
Score = 101 bits (243), Expect = 2e-21
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = +2
Query: 65 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
P S+ LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL
Sbjct: 28 PGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL 87
Query: 245 CLAQ 256
CLA+
Sbjct: 88 CLAR 91
Score = 59.3 bits (137), Expect = 1e-08
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +1
Query: 412 DSMTDGAQQALRRTMELYSSTTRFALAANNSER 510
DSMTDGAQQALRRTME+YS TTRFALA N S++
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDK 142
Score = 35.9 bits (79), Expect = 0.15
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 226 KNDDYTMLSAALLGVSFKDAVLELNASNDRGIDVVRNKIK 345
K L+ ALLG + KDA+LELNASND D + ++
Sbjct: 82 KTTSILCLARALLGPALKDAMLELNASNDSMTDGAQQALR 121
>AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 118 bits (284), Expect = 2e-26
Identities = 51/80 (63%), Positives = 68/80 (85%)
Frame = +3
Query: 507 EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNN 686
+IIEPIQSRCAVLRY++L+DAQIL +++ + KE + YT++G+ A++FTAQGD+R ALNN
Sbjct: 142 KIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNN 201
Query: 687 LQSTAQGFGHISPDNVFKVC 746
LQST GFG I+ +NVFKVC
Sbjct: 202 LQSTFSGFGFINSENVFKVC 221
Score = 101 bits (243), Expect = 2e-21
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = +2
Query: 65 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
P S+ LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL
Sbjct: 28 PGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL 87
Query: 245 CLAQ 256
CLA+
Sbjct: 88 CLAR 91
Score = 59.3 bits (137), Expect = 1e-08
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +1
Query: 412 DSMTDGAQQALRRTMELYSSTTRFALAANNSER 510
DSMTDGAQQALRRTME+YS TTRFALA N S++
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDK 142
Score = 35.9 bits (79), Expect = 0.15
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 226 KNDDYTMLSAALLGVSFKDAVLELNASNDRGIDVVRNKIK 345
K L+ ALLG + KDA+LELNASND D + ++
Sbjct: 82 KTTSILCLARALLGPALKDAMLELNASNDSMTDGAQQALR 121
>M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-kDa
subunit protein.
Length = 363
Score = 84.6 bits (200), Expect = 3e-16
Identities = 56/99 (56%), Positives = 63/99 (63%), Gaps = 9/99 (9%)
Frame = +1
Query: 241 TMLSAA--LLGVS-FKDAVLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKI 393
T+L+AA L G F+ VLELNAS++RGI VVR K+K FAQ V+ P KI
Sbjct: 87 TILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKI 146
Query: 394 VILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSER 510
VILDEADSMT AQ ALRRTME S TTRF L N R
Sbjct: 147 VILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSR 185
Score = 61.7 bits (143), Expect = 3e-09
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +2
Query: 71 SSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 250
+ K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL
Sbjct: 32 NKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAA 91
Query: 251 AQ 256
A+
Sbjct: 92 AR 93
Score = 58.8 bits (136), Expect = 2e-08
Identities = 28/75 (37%), Positives = 46/75 (61%)
Frame = +3
Query: 480 FCISSQ***EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQ 659
FC+ IIEP+ SRC+ R+ LSD ++++I KEN+ ++EG++ +V ++
Sbjct: 176 FCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISDEGIAYLVKVSE 235
Query: 660 GDLRSALNNLQSTAQ 704
GDLR A+ LQS +
Sbjct: 236 GDLRKAITFLQSATR 250
>CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein.
Length = 363
Score = 84.6 bits (200), Expect = 3e-16
Identities = 56/99 (56%), Positives = 63/99 (63%), Gaps = 9/99 (9%)
Frame = +1
Query: 241 TMLSAA--LLGVS-FKDAVLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKI 393
T+L+AA L G F+ VLELNAS++RGI VVR K+K FAQ V+ P KI
Sbjct: 87 TILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKI 146
Query: 394 VILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSER 510
VILDEADSMT AQ ALRRTME S TTRF L N R
Sbjct: 147 VILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSR 185
Score = 61.7 bits (143), Expect = 3e-09
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +2
Query: 71 SSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 250
+ K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL
Sbjct: 32 NKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAA 91
Query: 251 AQ 256
A+
Sbjct: 92 AR 93
Score = 58.8 bits (136), Expect = 2e-08
Identities = 28/75 (37%), Positives = 46/75 (61%)
Frame = +3
Query: 480 FCISSQ***EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQ 659
FC+ IIEP+ SRC+ R+ LSD ++++I KEN+ ++EG++ +V ++
Sbjct: 176 FCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISDEGIAYLVKVSE 235
Query: 660 GDLRSALNNLQSTAQ 704
GDLR A+ LQS +
Sbjct: 236 GDLRKAITFLQSATR 250
>BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 84.6 bits (200), Expect = 3e-16
Identities = 56/99 (56%), Positives = 63/99 (63%), Gaps = 9/99 (9%)
Frame = +1
Query: 241 TMLSAA--LLGVS-FKDAVLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKI 393
T+L+AA L G F+ VLELNAS++RGI VVR K+K FAQ V+ P KI
Sbjct: 87 TILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKI 146
Query: 394 VILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSER 510
VILDEADSMT AQ ALRRTME S TTRF L N R
Sbjct: 147 VILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSR 185
Score = 61.7 bits (143), Expect = 3e-09
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +2
Query: 71 SSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 250
+ K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL
Sbjct: 32 NKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAA 91
Query: 251 AQ 256
A+
Sbjct: 92 AR 93
Score = 58.8 bits (136), Expect = 2e-08
Identities = 28/75 (37%), Positives = 46/75 (61%)
Frame = +3
Query: 480 FCISSQ***EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQ 659
FC+ IIEP+ SRC+ R+ LSD ++++I KEN+ ++EG++ +V ++
Sbjct: 176 FCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISDEGIAYLVKVSE 235
Query: 660 GDLRSALNNLQSTAQ 704
GDLR A+ LQS +
Sbjct: 236 GDLRKAITFLQSATR 250
>BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 84.6 bits (200), Expect = 3e-16
Identities = 56/99 (56%), Positives = 63/99 (63%), Gaps = 9/99 (9%)
Frame = +1
Query: 241 TMLSAA--LLGVS-FKDAVLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKI 393
T+L+AA L G F+ VLELNAS++RGI VVR K+K FAQ V+ P KI
Sbjct: 87 TILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKI 146
Query: 394 VILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSER 510
VILDEADSMT AQ ALRRTME S TTRF L N R
Sbjct: 147 VILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSR 185
Score = 61.7 bits (143), Expect = 3e-09
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +2
Query: 71 SSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 250
+ K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL
Sbjct: 32 NKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAA 91
Query: 251 AQ 256
A+
Sbjct: 92 AR 93
Score = 58.8 bits (136), Expect = 2e-08
Identities = 28/75 (37%), Positives = 46/75 (61%)
Frame = +3
Query: 480 FCISSQ***EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQ 659
FC+ IIEP+ SRC+ R+ LSD ++++I KEN+ ++EG++ +V ++
Sbjct: 176 FCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISDEGIAYLVKVSE 235
Query: 660 GDLRSALNNLQSTAQ 704
GDLR A+ LQS +
Sbjct: 236 GDLRKAITFLQSATR 250
>BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 84.6 bits (200), Expect = 3e-16
Identities = 56/99 (56%), Positives = 63/99 (63%), Gaps = 9/99 (9%)
Frame = +1
Query: 241 TMLSAA--LLGVS-FKDAVLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKI 393
T+L+AA L G F+ VLELNAS++RGI VVR K+K FAQ V+ P KI
Sbjct: 87 TILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKI 146
Query: 394 VILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSER 510
VILDEADSMT AQ ALRRTME S TTRF L N R
Sbjct: 147 VILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSR 185
Score = 61.7 bits (143), Expect = 3e-09
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +2
Query: 71 SSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 250
+ K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL
Sbjct: 32 NKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAA 91
Query: 251 AQ 256
A+
Sbjct: 92 AR 93
Score = 58.8 bits (136), Expect = 2e-08
Identities = 28/75 (37%), Positives = 46/75 (61%)
Frame = +3
Query: 480 FCISSQ***EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQ 659
FC+ IIEP+ SRC+ R+ LSD ++++I KEN+ ++EG++ +V ++
Sbjct: 176 FCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISDEGIAYLVKVSE 235
Query: 660 GDLRSALNNLQSTAQ 704
GDLR A+ LQS +
Sbjct: 236 GDLRKAITFLQSATR 250
>AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C
(activator 1) 4 (37kD) protein.
Length = 363
Score = 84.6 bits (200), Expect = 3e-16
Identities = 56/99 (56%), Positives = 63/99 (63%), Gaps = 9/99 (9%)
Frame = +1
Query: 241 TMLSAA--LLGVS-FKDAVLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKI 393
T+L+AA L G F+ VLELNAS++RGI VVR K+K FAQ V+ P KI
Sbjct: 87 TILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKI 146
Query: 394 VILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSER 510
VILDEADSMT AQ ALRRTME S TTRF L N R
Sbjct: 147 VILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSR 185
Score = 61.7 bits (143), Expect = 3e-09
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +2
Query: 71 SSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 250
+ K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL
Sbjct: 32 NKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAA 91
Query: 251 AQ 256
A+
Sbjct: 92 AR 93
Score = 58.8 bits (136), Expect = 2e-08
Identities = 28/75 (37%), Positives = 46/75 (61%)
Frame = +3
Query: 480 FCISSQ***EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQ 659
FC+ IIEP+ SRC+ R+ LSD ++++I KEN+ ++EG++ +V ++
Sbjct: 176 FCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISDEGIAYLVKVSE 235
Query: 660 GDLRSALNNLQSTAQ 704
GDLR A+ LQS +
Sbjct: 236 GDLRKAITFLQSATR 250
>L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-kDa
subunit protein.
Length = 340
Score = 80.6 bits (190), Expect = 5e-15
Identities = 33/71 (46%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +2
Query: 50 KKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGK 229
K+Q +P+++K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GK
Sbjct: 7 KQQEQPAATKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGK 66
Query: 230 TTTIL-CLAQL 259
T+TIL C QL
Sbjct: 67 TSTILACAKQL 77
Score = 78.6 bits (185), Expect = 2e-14
Identities = 40/75 (53%), Positives = 49/75 (65%)
Frame = +1
Query: 274 FKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRT 453
F VLELNAS+DRGID++R I FA + G K+VILDEAD+MT AQ ALRR
Sbjct: 83 FGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRV 141
Query: 454 MELYSSTTRFALAAN 498
+E ++ TRF L N
Sbjct: 142 IEKFTENTRFCLICN 156
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/86 (32%), Positives = 50/86 (58%)
Frame = +3
Query: 480 FCISSQ***EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQ 659
FC+ +II +QSRC R+ L+ ++ ++ + +E + +E+G+ A+V +
Sbjct: 151 FCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKALVTLSS 210
Query: 660 GDLRSALNNLQSTAQGFGHISPDNVF 737
GD+R ALN LQST FG ++ + V+
Sbjct: 211 GDMRRALNILQSTNMAFGKVTEETVY 236
>CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein.
Length = 340
Score = 80.6 bits (190), Expect = 5e-15
Identities = 33/71 (46%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +2
Query: 50 KKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGK 229
K+Q +P+++K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GK
Sbjct: 7 KQQEQPAATKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGK 66
Query: 230 TTTIL-CLAQL 259
T+TIL C QL
Sbjct: 67 TSTILACAKQL 77
Score = 75.8 bits (178), Expect = 2e-13
Identities = 39/75 (52%), Positives = 48/75 (64%)
Frame = +1
Query: 274 FKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRT 453
F VLELNAS+DRGID++R I FA + G K+VILDEAD+MT AQ ALR
Sbjct: 83 FGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRGV 141
Query: 454 MELYSSTTRFALAAN 498
+E ++ TRF L N
Sbjct: 142 IEKFTENTRFCLICN 156
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/86 (32%), Positives = 50/86 (58%)
Frame = +3
Query: 480 FCISSQ***EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQ 659
FC+ +II +QSRC R+ L+ ++ ++ + +E + +E+G+ A+V +
Sbjct: 151 FCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKALVTLSS 210
Query: 660 GDLRSALNNLQSTAQGFGHISPDNVF 737
GD+R ALN LQST FG ++ + V+
Sbjct: 211 GDMRRALNILQSTNMAFGKVTEETVY 236
>BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 80.6 bits (190), Expect = 5e-15
Identities = 33/71 (46%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +2
Query: 50 KKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGK 229
K+Q +P+++K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GK
Sbjct: 7 KQQEQPAATKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGK 66
Query: 230 TTTIL-CLAQL 259
T+TIL C QL
Sbjct: 67 TSTILACAKQL 77
Score = 78.6 bits (185), Expect = 2e-14
Identities = 40/75 (53%), Positives = 49/75 (65%)
Frame = +1
Query: 274 FKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRT 453
F VLELNAS+DRGID++R I FA + G K+VILDEAD+MT AQ ALRR
Sbjct: 83 FGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRV 141
Query: 454 MELYSSTTRFALAAN 498
+E ++ TRF L N
Sbjct: 142 IEKFTENTRFCLICN 156
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/86 (32%), Positives = 50/86 (58%)
Frame = +3
Query: 480 FCISSQ***EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQ 659
FC+ +II +QSRC R+ L+ ++ ++ + +E + +E+G+ A+V +
Sbjct: 151 FCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKALVTLSS 210
Query: 660 GDLRSALNNLQSTAQGFGHISPDNVF 737
GD+R ALN LQST FG ++ + V+
Sbjct: 211 GDMRRALNILQSTNMAFGKVTEETVY 236
>BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 80.6 bits (190), Expect = 5e-15
Identities = 33/71 (46%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +2
Query: 50 KKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGK 229
K+Q +P+++K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GK
Sbjct: 7 KQQEQPAATKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGK 66
Query: 230 TTTIL-CLAQL 259
T+TIL C QL
Sbjct: 67 TSTILACAKQL 77
Score = 78.6 bits (185), Expect = 2e-14
Identities = 40/75 (53%), Positives = 49/75 (65%)
Frame = +1
Query: 274 FKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRT 453
F VLELNAS+DRGID++R I FA + G K+VILDEAD+MT AQ ALRR
Sbjct: 83 FGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRV 141
Query: 454 MELYSSTTRFALAAN 498
+E ++ TRF L N
Sbjct: 142 IEKFTENTRFCLICN 156
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/86 (32%), Positives = 50/86 (58%)
Frame = +3
Query: 480 FCISSQ***EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQ 659
FC+ +II +QSRC R+ L+ ++ ++ + +E + +E+G+ A+V +
Sbjct: 151 FCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKALVTLSS 210
Query: 660 GDLRSALNNLQSTAQGFGHISPDNVF 737
GD+R ALN LQST FG ++ + V+
Sbjct: 211 GDMRRALNILQSTNMAFGKVTEETVY 236
>AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 80.6 bits (190), Expect = 5e-15
Identities = 33/71 (46%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +2
Query: 50 KKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGK 229
K+Q +P+++K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GK
Sbjct: 7 KQQEQPAATKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGK 66
Query: 230 TTTIL-CLAQL 259
T+TIL C QL
Sbjct: 67 TSTILACAKQL 77
Score = 78.6 bits (185), Expect = 2e-14
Identities = 40/75 (53%), Positives = 49/75 (65%)
Frame = +1
Query: 274 FKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRT 453
F VLELNAS+DRGID++R I FA + G K+VILDEAD+MT AQ ALRR
Sbjct: 83 FGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRV 141
Query: 454 MELYSSTTRFALAAN 498
+E ++ TRF L N
Sbjct: 142 IEKFTENTRFCLICN 156
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/86 (32%), Positives = 50/86 (58%)
Frame = +3
Query: 480 FCISSQ***EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQ 659
FC+ +II +QSRC R+ L+ ++ ++ + +E + +E+G+ A+V +
Sbjct: 151 FCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKALVTLSS 210
Query: 660 GDLRSALNNLQSTAQGFGHISPDNVF 737
GD+R ALN LQST FG ++ + V+
Sbjct: 211 GDMRRALNILQSTNMAFGKVTEETVY 236
>AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5
isoform 1 variant protein.
Length = 351
Score = 80.6 bits (190), Expect = 5e-15
Identities = 33/71 (46%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +2
Query: 50 KKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGK 229
K+Q +P+++K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GK
Sbjct: 21 KQQEQPAATKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGK 80
Query: 230 TTTIL-CLAQL 259
T+TIL C QL
Sbjct: 81 TSTILACAKQL 91
Score = 78.6 bits (185), Expect = 2e-14
Identities = 40/75 (53%), Positives = 49/75 (65%)
Frame = +1
Query: 274 FKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRT 453
F VLELNAS+DRGID++R I FA + G K+VILDEAD+MT AQ ALRR
Sbjct: 97 FGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRV 155
Query: 454 MELYSSTTRFALAAN 498
+E ++ TRF L N
Sbjct: 156 IEKFTENTRFCLICN 170
Score = 59.3 bits (137), Expect = 1e-08
Identities = 28/86 (32%), Positives = 50/86 (58%)
Frame = +3
Query: 480 FCISSQ***EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQ 659
FC+ +II +QSRC R+ L+ ++ ++ + +E + +E+G+ A+V +
Sbjct: 165 FCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISEDGMKALVTLSS 224
Query: 660 GDLRSALNNLQSTAQGFGHISPDNVF 737
GD+R ALN LQST FG ++ + V+
Sbjct: 225 GDMRRALNILQSTNMAFGKVTEETVY 250
>L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-kDa
subunit protein.
Length = 356
Score = 50.8 bits (116), Expect = 5e-06
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Frame = +1
Query: 289 LELNASNDRGID--VVRNKIKMFAQ--QKVTLPPGRHKIVILDEADSMTDGAQQALRRTM 456
LE+N S+ D V++ +K AQ Q T K+V+L E D +T AQ ALRRTM
Sbjct: 93 LEVNPSDAGNSDRVVIQEMLKTVAQSQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTM 152
Query: 457 ELYSSTTRFALAANNSER 510
E Y ST R L N++ +
Sbjct: 153 EKYMSTCRLILCCNSTSK 170
Score = 45.6 bits (103), Expect = 2e-04
Identities = 16/52 (30%), Positives = 33/52 (63%)
Frame = +2
Query: 95 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 250
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCI 55
Score = 30.3 bits (65), Expect = 7.7
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 507 EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSAL 680
++I PI+SRC +R S I + +C KE L+ + + + +LR AL
Sbjct: 170 KVIPPIRSRCLAVRVPAPSIEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 50.8 bits (116), Expect = 5e-06
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Frame = +1
Query: 289 LELNASNDRGID--VVRNKIKMFAQ--QKVTLPPGRHKIVILDEADSMTDGAQQALRRTM 456
LE+N S+ D V++ +K AQ Q T K+V+L E D +T AQ ALRRTM
Sbjct: 93 LEVNPSDAGNSDRVVIQEMLKTVAQSQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTM 152
Query: 457 ELYSSTTRFALAANNSER 510
E Y ST R L N++ +
Sbjct: 153 EKYMSTCRLILCCNSTSK 170
Score = 45.6 bits (103), Expect = 2e-04
Identities = 16/52 (30%), Positives = 33/52 (63%)
Frame = +2
Query: 95 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 250
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCI 55
Score = 30.3 bits (65), Expect = 7.7
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 507 EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSAL 680
++I PI+SRC +R S I + +C KE L+ + + + +LR AL
Sbjct: 170 KVIPPIRSRCLAVRVPAPSIEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 50.8 bits (116), Expect = 5e-06
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Frame = +1
Query: 289 LELNASNDRGID--VVRNKIKMFAQ--QKVTLPPGRHKIVILDEADSMTDGAQQALRRTM 456
LE+N S+ D V++ +K AQ Q T K+V+L E D +T AQ ALRRTM
Sbjct: 93 LEVNPSDAGNSDRVVIQEMLKTVAQSQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTM 152
Query: 457 ELYSSTTRFALAANNSER 510
E Y ST R L N++ +
Sbjct: 153 EKYMSTCRLILCCNSTSK 170
Score = 45.6 bits (103), Expect = 2e-04
Identities = 16/52 (30%), Positives = 33/52 (63%)
Frame = +2
Query: 95 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 250
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCI 55
Score = 30.3 bits (65), Expect = 7.7
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 507 EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSAL 680
++I PI+SRC +R S I + +C KE L+ + + + +LR AL
Sbjct: 170 KVIPPIRSRCLAVRVPAPSIEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 50.8 bits (116), Expect = 5e-06
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Frame = +1
Query: 289 LELNASNDRGID--VVRNKIKMFAQ--QKVTLPPGRHKIVILDEADSMTDGAQQALRRTM 456
LE+N S+ D V++ +K AQ Q T K+V+L E D +T AQ ALRRTM
Sbjct: 93 LEVNPSDAGNSDRVVIQEMLKTVAQSQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTM 152
Query: 457 ELYSSTTRFALAANNSER 510
E Y ST R L N++ +
Sbjct: 153 EKYMSTCRLILCCNSTSK 170
Score = 45.6 bits (103), Expect = 2e-04
Identities = 16/52 (30%), Positives = 33/52 (63%)
Frame = +2
Query: 95 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 250
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCI 55
Score = 30.3 bits (65), Expect = 7.7
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 507 EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSAL 680
++I PI+SRC +R S I + +C KE L+ + + + +LR AL
Sbjct: 170 KVIPPIRSRCLAVRVPAPSIEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3
isoform 1 variant protein.
Length = 356
Score = 50.8 bits (116), Expect = 5e-06
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Frame = +1
Query: 289 LELNASNDRGID--VVRNKIKMFAQ--QKVTLPPGRHKIVILDEADSMTDGAQQALRRTM 456
LE+N S+ D V++ +K AQ Q T K+V+L E D +T AQ ALRRTM
Sbjct: 93 LEVNPSDAGNSDRVVIQEMLKTVAQSQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTM 152
Query: 457 ELYSSTTRFALAANNSER 510
E Y ST R L N++ +
Sbjct: 153 EKYMSTCRLILCCNSTSK 170
Score = 45.6 bits (103), Expect = 2e-04
Identities = 16/52 (30%), Positives = 33/52 (63%)
Frame = +2
Query: 95 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 250
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCI 55
>AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C
(activator 1) 3 (38kD) protein.
Length = 356
Score = 50.8 bits (116), Expect = 5e-06
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Frame = +1
Query: 289 LELNASNDRGID--VVRNKIKMFAQ--QKVTLPPGRHKIVILDEADSMTDGAQQALRRTM 456
LE+N S+ D V++ +K AQ Q T K+V+L E D +T AQ ALRRTM
Sbjct: 93 LEVNPSDAGNSDRVVIQEMLKTVAQSQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTM 152
Query: 457 ELYSSTTRFALAANNSER 510
E Y ST R L N++ +
Sbjct: 153 EKYMSTCRLILCCNSTSK 170
Score = 45.6 bits (103), Expect = 2e-04
Identities = 16/52 (30%), Positives = 33/52 (63%)
Frame = +2
Query: 95 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 250
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCI 55
Score = 30.3 bits (65), Expect = 7.7
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 507 EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSAL 680
++I PI+SRC +R S I + +C KE L+ + + + +LR AL
Sbjct: 170 KVIPPIRSRCLAVRVPAPSIEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein
protein.
Length = 670
Score = 42.7 bits (96), Expect = 0.001
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +2
Query: 80 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 235
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 236 TILCLAQ 256
T+ L++
Sbjct: 135 TLKILSK 141
>BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 42.7 bits (96), Expect = 0.001
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +2
Query: 80 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 235
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 236 TILCLAQ 256
T+ L++
Sbjct: 135 TLKILSK 141
>AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 42.7 bits (96), Expect = 0.001
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +2
Query: 80 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 235
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 236 TILCLAQ 256
T+ L++
Sbjct: 135 TLKILSK 141
>AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein.
Length = 670
Score = 42.7 bits (96), Expect = 0.001
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +2
Query: 80 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 235
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 236 TILCLAQ 256
T+ L++
Sbjct: 135 TLKILSK 141
>AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 42.7 bits (96), Expect = 0.001
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +2
Query: 80 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 235
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 236 TILCLAQ 256
T+ L++
Sbjct: 135 TLKILSK 141
>AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 42.7 bits (96), Expect = 0.001
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +2
Query: 80 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 235
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 236 TILCLAQ 256
T+ L++
Sbjct: 135 TLKILSK 141
>AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 42.7 bits (96), Expect = 0.001
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +2
Query: 80 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 235
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 236 TILCLAQ 256
T+ L++
Sbjct: 135 TLKILSK 141
>AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein.
Length = 670
Score = 42.7 bits (96), Expect = 0.001
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +2
Query: 80 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 235
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 236 TILCLAQ 256
T+ L++
Sbjct: 135 TLKILSK 141
>AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolog
protein.
Length = 681
Score = 42.7 bits (96), Expect = 0.001
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +2
Query: 80 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 235
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 86 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 145
Query: 236 TILCLAQ 256
T+ L++
Sbjct: 146 TLKILSK 152
>AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein
protein.
Length = 670
Score = 42.7 bits (96), Expect = 0.001
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +2
Query: 80 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 235
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 236 TILCLAQ 256
T+ L++
Sbjct: 135 TLKILSK 141
>AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint
protein RAD17 protein.
Length = 670
Score = 42.7 bits (96), Expect = 0.001
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +2
Query: 80 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 235
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 236 TILCLAQ 256
T+ L++
Sbjct: 135 TLKILSK 141
>BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 39.5 bits (88), Expect = 0.013
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 92 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQLS 262
P + RP T D G V + L +T P++I+ GPPG GKTT +A S
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASNS 285
Query: 263 SEY 271
++
Sbjct: 286 KKH 288
>AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 445
Score = 39.5 bits (88), Expect = 0.013
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 92 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQLS 262
P + RP T D G V + L +T P++I+ GPPG GKTT +A S
Sbjct: 6 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASNS 65
Query: 263 SEY 271
++
Sbjct: 66 KKH 68
>AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 665
Score = 39.5 bits (88), Expect = 0.013
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 92 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQLS 262
P + RP T D G V + L +T P++I+ GPPG GKTT +A S
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASNS 285
Query: 263 SEY 271
++
Sbjct: 286 KKH 288
>AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 39.5 bits (88), Expect = 0.013
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 92 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQLS 262
P + RP T D G V + L +T P++I+ GPPG GKTT +A S
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASNS 285
Query: 263 SEY 271
++
Sbjct: 286 KKH 288
>AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 665
Score = 39.5 bits (88), Expect = 0.013
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 92 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQLS 262
P + RP T D G V + L +T P++I+ GPPG GKTT +A S
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASNS 285
Query: 263 SEY 271
++
Sbjct: 286 KKH 288
>AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL
protein.
Length = 445
Score = 39.5 bits (88), Expect = 0.013
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 92 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQLS 262
P + RP T D G V + L +T P++I+ GPPG GKTT +A S
Sbjct: 6 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASNS 65
Query: 263 SEY 271
++
Sbjct: 66 KKH 68
>AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 646
Score = 39.5 bits (88), Expect = 0.013
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 92 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQLS 262
P + RP T D G V + L +T P++I+ GPPG GKTT +A S
Sbjct: 207 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASNS 266
Query: 263 SEY 271
++
Sbjct: 267 KKH 269
>AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase
interacting protein protein.
Length = 665
Score = 36.7 bits (81), Expect = 0.088
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +2
Query: 92 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQLS 262
P + RP T D G V + L +T P++ + GPPG GKTT +A S
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLNLWGPPGCGKTTLAHIIASNS 285
Query: 263 SEY 271
++
Sbjct: 286 KKH 288
>AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility
associated gene 1 protein.
Length = 1844
Score = 35.1 bits (77), Expect = 0.27
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +2
Query: 59 VKPSSSKST---NLPWIEKYRPQTFDDIVGNEDTVSRLAVFAK 178
+K SSK + ++ W EKY+PQT +++GNE + +L + K
Sbjct: 1039 IKLDSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLK 1081
>AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens
cDNA FLJ12735 fis, clone NT2RP2000258, weakly similar to
ACTIVATOR 1 140 KD SUBUNIT. ).
Length = 801
Score = 35.1 bits (77), Expect = 0.27
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +2
Query: 59 VKPSSSKST---NLPWIEKYRPQTFDDIVGNEDTVSRLAVFAK 178
+K SSK + ++ W EKY+PQT +++GNE + +L + K
Sbjct: 636 IKLDSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLK 678
>AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 1844
Score = 35.1 bits (77), Expect = 0.27
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +2
Query: 59 VKPSSSKST---NLPWIEKYRPQTFDDIVGNEDTVSRLAVFAK 178
+K SSK + ++ W EKY+PQT +++GNE + +L + K
Sbjct: 1039 IKLDSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLK 1081
>AY072792-1|AAL68396.1| 994|Homo sapiens PAAD and NACHT-containing
protein 2 protein.
Length = 994
Score = 33.1 bits (72), Expect = 1.1
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 122 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLAQLSSE 268
F++ V E D + RL +TG P +II GP G+GKTT ++ L S+
Sbjct: 123 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMAWSD 174
>AK056688-1|BAB71254.1| 919|Homo sapiens protein ( Homo sapiens
cDNA FLJ32126 fis, clone PEBLM2000112, weakly similar to
Homo sapiens nucleotide-binding site protein 1 mRNA. ).
Length = 919
Score = 33.1 bits (72), Expect = 1.1
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 122 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLAQLSSE 268
F++ V E D + RL +TG P +II GP G+GKTT ++ L S+
Sbjct: 48 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMAWSD 99
>AF482706-1|AAL88672.1| 916|Homo sapiens ribonuclease inhibitor 2
protein.
Length = 916
Score = 33.1 bits (72), Expect = 1.1
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 122 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLAQLSSE 268
F++ V E D + RL +TG P +II GP G+GKTT ++ L S+
Sbjct: 45 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMAWSD 96
>AF479747-1|AAL87104.1| 994|Homo sapiens PYRIN-containing
APAF1-like protein 4 protein.
Length = 994
Score = 33.1 bits (72), Expect = 1.1
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 122 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLAQLSSE 268
F++ V E D + RL +TG P +II GP G+GKTT ++ L S+
Sbjct: 123 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMAWSD 174
>AF442488-1|AAL35293.1| 994|Homo sapiens NALP4 protein.
Length = 994
Score = 33.1 bits (72), Expect = 1.1
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 122 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLAQLSSE 268
F++ V E D + RL +TG P +II GP G+GKTT ++ L S+
Sbjct: 123 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMAWSD 174
>BC018184-1|AAH18184.1| 975|Homo sapiens CTF18, chromosome
transmission fidelity factor 18 homolog (S. cerevisiae)
protein.
Length = 975
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 283 AVLELNASNDRGIDVVRNKIKMFAQQKVTL-PPGRHKIVILDEAD 414
+V+E+NAS+DR +V R +I+ Q + L G+ +++DE D
Sbjct: 394 SVVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLVIDEID 438
>BC006437-1|AAH06437.1| 1016|Homo sapiens CHTF18 protein protein.
Length = 1016
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 283 AVLELNASNDRGIDVVRNKIKMFAQQKVTL-PPGRHKIVILDEAD 414
+V+E+NAS+DR +V R +I+ Q + L G+ +++DE D
Sbjct: 435 SVVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLVIDEID 479
>BC006278-1|AAH06278.2| 975|Homo sapiens CTF18, chromosome
transmission fidelity factor 18 homolog (S. cerevisiae)
protein.
Length = 975
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 283 AVLELNASNDRGIDVVRNKIKMFAQQKVTL-PPGRHKIVILDEAD 414
+V+E+NAS+DR +V R +I+ Q + L G+ +++DE D
Sbjct: 394 SVVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLVIDEID 438
>AL031033-2|CAB53056.1| 260|Homo sapiens protein ( Human DNA
sequence from clone LA16c-321D2 on chromosome 16
Contains a gene for a Ribosomal Large Subunit
Pseudouridine Synthase (EC ).
Length = 260
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 283 AVLELNASNDRGIDVVRNKIKMFAQQKVTL-PPGRHKIVILDEAD 414
+V+E+NAS+DR +V R +I+ Q + L G+ +++DE D
Sbjct: 116 SVVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLVIDEID 160
>AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with
holliday junction DNA helicase RUVB like protein.
Length = 1184
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 283 AVLELNASNDRGIDVVRNKIKMFAQQKVTL-PPGRHKIVILDEAD 414
+V+E+NAS+DR +V R +I+ Q + L G+ +++DE D
Sbjct: 589 SVVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLVIDEID 633
>Y18418-1|CAB46271.1| 456|Homo sapiens erythrocyte cytosolic
protein of 54 kDa, ECP-54 protein.
Length = 456
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQLSSEYLSKTPY 289
+++AGPPG GKT L +AQ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>DQ469310-1|ABF13334.1| 386|Homo sapiens RUVBL1-FK protein.
Length = 386
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQLSSEYLSKTPY 289
+++AGPPG GKT L +AQ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>BT007057-1|AAP35706.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQLSSEYLSKTPY 289
+++AGPPG GKT L +AQ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>BC012886-1|AAH12886.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQLSSEYLSKTPY 289
+++AGPPG GKT L +AQ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>BC002993-1|AAH02993.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQLSSEYLSKTPY 289
+++AGPPG GKT L +AQ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>AK222575-1|BAD96295.1| 456|Homo sapiens TATA binding protein
interacting protein 49 kDa variant protein.
Length = 456
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQLSSEYLSKTPY 289
+++AGPPG GKT L +AQ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>AK222563-1|BAD96283.1| 456|Homo sapiens TATA binding protein
interacting protein 49 kDa variant protein.
Length = 456
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQLSSEYLSKTPY 289
+++AGPPG GKT L +AQ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>AJ010058-1|CAA08986.1| 456|Homo sapiens Nuclear matrix protein
NMP238 protein.
Length = 456
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQLSSEYLSKTPY 289
+++AGPPG GKT L +AQ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>AF380344-1|AAM45570.1| 456|Homo sapiens pontin 52 protein.
Length = 456
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQLSSEYLSKTPY 289
+++AGPPG GKT L +AQ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>AF099084-1|AAD04427.1| 456|Homo sapiens Pontin52 protein.
Length = 456
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQLSSEYLSKTPY 289
+++AGPPG GKT L +AQ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>AF070735-1|AAC77819.1| 456|Homo sapiens RuvB-like protein RUVBL1
protein.
Length = 456
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQLSSEYLSKTPY 289
+++AGPPG GKT L +AQ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>AB012122-1|BAA28169.1| 456|Homo sapiens TIP49 protein.
Length = 456
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQLSSEYLSKTPY 289
+++AGPPG GKT L +AQ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>L24544-1|AAA70430.1| 993|Homo sapiens DNA helicase protein.
Length = 993
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 146 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
DT + AV II GPPG GKTTT++
Sbjct: 193 DTSQKEAVLFALSQKELAIIHGPPGTGKTTTVV 225
>BC025299-1|AAH25299.1| 868|Homo sapiens Unknown (protein for
IMAGE:4890919) protein.
Length = 868
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 146 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
DT + AV II GPPG GKTTT++
Sbjct: 193 DTSQKEAVLFALSQKELAIIHGPPGTGKTTTVV 225
>BC050576-1|AAH50576.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 185 NAPNIIIAGPPGVGKTTTILCLAQ-LSSEYLS 277
N P I+I GPP GKTT + L + L+S L+
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCKHLNSSLLT 87
>BC050326-1|AAH50326.1| 994|Homo sapiens NLR family, pyrin domain
containing 4 protein.
Length = 994
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 122 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLAQLSSE 268
F++ V E D + RL + G P +II GP G+GKTT ++ L S+
Sbjct: 123 FEEEVKQEECDHLDRLFAPKEAGKQPRTVIIQGPQGIGKTTLLMKLMMAWSD 174
>BC034776-1|AAH34776.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 185 NAPNIIIAGPPGVGKTTTILCLAQ-LSSEYLS 277
N P I+I GPP GKTT + L + L+S L+
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCKHLNSSLLT 87
>AL445645-1|CAH72109.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 185 NAPNIIIAGPPGVGKTTTILCLAQ-LSSEYLS 277
N P I+I GPP GKTT + L + L+S L+
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCKHLNSSLLT 87
>AL160165-5|CAH70535.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 185 NAPNIIIAGPPGVGKTTTILCLAQ-LSSEYLS 277
N P I+I GPP GKTT + L + L+S L+
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCKHLNSSLLT 87
>AK057266-1|BAB71402.1| 479|Homo sapiens protein ( Homo sapiens
cDNA FLJ32704 fis, clone TESTI2000591, weakly similar to
ADENYLATE KINASE, CHLOROPLAST (EC 2.7.4.3). ).
Length = 479
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 185 NAPNIIIAGPPGVGKTTTILCLAQ-LSSEYLS 277
N P I+I GPP GKTT + L + L+S L+
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCKHLNSSLLT 87
>L14754-1|AAA53082.1| 993|Homo sapiens DNA-binding protein protein.
Length = 993
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 146 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
DT + AV II GPPG GKTTT++
Sbjct: 193 DTSQKEAVSFALSQKELAIIHGPPGTGKTTTVV 225
>BC105090-1|AAI05091.1| 993|Homo sapiens immunoglobulin mu binding
protein 2 protein.
Length = 993
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 146 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
DT + AV II GPPG GKTTT++
Sbjct: 193 DTSQKEAVSFALSQKELAIIHGPPGTGKTTTVV 225
>BC105088-1|AAI05089.1| 993|Homo sapiens immunoglobulin mu binding
protein 2 protein.
Length = 993
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 146 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
DT + AV II GPPG GKTTT++
Sbjct: 193 DTSQKEAVSFALSQKELAIIHGPPGTGKTTTVV 225
>BC000290-1|AAH00290.1| 868|Homo sapiens IGHMBP2 protein protein.
Length = 868
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 146 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
DT + AV II GPPG GKTTT++
Sbjct: 193 DTSQKEAVSFALSQKELAIIHGPPGTGKTTTVV 225
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,245,909
Number of Sequences: 237096
Number of extensions: 2290956
Number of successful extensions: 5903
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 5477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5880
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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