Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30426
(746 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g63160.1 68414.m07138 replication factor C 40 kDa, putative s... 146 1e-35
At1g77470.1 68414.m09021 replication factor C 36 kDA, putative s... 86 3e-17
At1g21690.2 68414.m02715 replication factor C 37 kDa, putative S... 83 1e-16
At1g21690.1 68414.m02714 replication factor C 37 kDa, putative S... 83 1e-16
At5g27740.1 68418.m03327 expressed protein 49 3e-06
At1g24290.1 68414.m03065 AAA-type ATPase family protein similar ... 48 9e-06
At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT d... 44 8e-05
At1g14460.1 68414.m01715 DNA polymerase-related weak similarity ... 39 0.003
At5g66130.1 68418.m08331 cell cycle checkpoint protein-related w... 39 0.004
At2g02480.1 68415.m00187 DNA polymerase-related weak similarity ... 38 0.005
At4g24790.1 68417.m03550 expressed protein ; expression supporte... 38 0.007
At5g45720.1 68418.m05621 hypothetical protein 35 0.066
At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identic... 34 0.087
At5g18370.1 68418.m02161 disease resistance protein (TIR-NBS-LRR... 33 0.20
At1g04730.1 68414.m00469 AAA-type ATPase family protein contains... 33 0.20
At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP1... 33 0.27
At5g46470.1 68418.m05723 disease resistance protein (TIR-NBS-LRR... 32 0.35
At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP1... 32 0.35
At3g04210.1 68416.m00445 disease resistance protein (TIR-NBS cla... 32 0.35
At1g01300.1 68414.m00046 aspartyl protease family protein contai... 32 0.35
At5g60340.1 68418.m07564 maoC-like dehydratase domain-containing... 32 0.46
At3g61820.1 68416.m06939 aspartyl protease family protein contai... 32 0.46
At4g18820.1 68417.m02778 expressed protein 31 0.61
At2g03270.1 68415.m00280 DNA-binding protein, putative similar t... 31 0.81
At1g77620.1 68414.m09037 expressed protein 31 0.81
At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR... 31 1.1
At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP1... 31 1.1
At3g44400.1 68416.m04770 disease resistance protein (TIR-NBS-LRR... 31 1.1
At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR... 31 1.1
At5g66005.2 68418.m08311 Expressed protein 30 1.4
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 30 1.4
At4g19500.1 68417.m02868 disease resistance protein (TIR-NBS-LRR... 30 1.9
At2g29940.1 68415.m03642 ABC transporter family protein similar ... 30 1.9
At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to R... 30 1.9
At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding ... 29 2.5
At5g50340.1 68418.m06235 DNA repair protein-related similar to R... 29 2.5
At5g22330.1 68418.m02605 TATA box-binding protein-interacting pr... 29 2.5
At5g17970.1 68418.m02108 disease resistance protein (TIR-NBS-LRR... 29 2.5
At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive eff... 29 2.5
At1g73170.1 68414.m08466 expressed protein 29 2.5
At1g63740.1 68414.m07213 disease resistance protein (TIR-NBS-LRR... 29 2.5
At1g63730.1 68414.m07212 disease resistance protein (TIR-NBS-LRR... 29 3.3
At5g38340.1 68418.m04627 disease resistance protein (TIR-NBS-LRR... 29 4.3
At4g24710.1 68417.m03536 AAA-type ATPase family protein similar ... 29 4.3
At3g28610.1 68416.m03571 AAA-type ATPase family protein contains... 29 4.3
At3g27730.1 68416.m03462 ATP-dependent DNA helicase, putative si... 29 4.3
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 29 4.3
At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR... 29 4.3
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 29 4.3
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 29 4.3
At5g61730.1 68418.m07746 ABC transporter family protein contains... 28 5.7
At5g61690.1 68418.m07740 ABC transporter family protein ABC tran... 28 5.7
At3g47730.1 68416.m05200 ABC transporter family protein AbcA, Di... 28 5.7
At1g33290.2 68414.m04118 sporulation protein-related isoform con... 28 5.7
At1g33290.1 68414.m04117 sporulation protein-related isoform con... 28 5.7
At1g16280.1 68414.m01949 DEAD/DEAH box helicase, putative simila... 28 5.7
At5g57480.1 68418.m07183 AAA-type ATPase family protein contains... 28 7.6
At5g06530.2 68418.m00737 ABC transporter family protein 28 7.6
At5g06530.1 68418.m00736 ABC transporter family protein 28 7.6
At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putati... 28 7.6
At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putati... 28 7.6
At4g25835.1 68417.m03716 AAA-type ATPase family protein contains... 28 7.6
At4g15236.1 68417.m02335 ABC transporter family protein similar ... 28 7.6
At3g10420.2 68416.m01250 sporulation protein-related similar to ... 28 7.6
At3g10420.1 68416.m01249 sporulation protein-related similar to ... 28 7.6
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains... 28 7.6
At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATP... 28 7.6
At1g63880.1 68414.m07234 disease resistance protein (TIR-NBS-LRR... 28 7.6
At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putati... 28 7.6
At1g15520.1 68414.m01867 ABC transporter family protein similar ... 28 7.6
At5g66910.1 68418.m08434 disease resistance protein (CC-NBS-LRR ... 27 10.0
At5g43470.2 68418.m05315 disease resistance protein (CC-NBS-LRR ... 27 10.0
At5g43470.1 68418.m05314 disease resistance protein (CC-NBS-LRR ... 27 10.0
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ... 27 10.0
At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR... 27 10.0
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 27 10.0
At1g72860.1 68414.m08427 disease resistance protein (TIR-NBS-LRR... 27 10.0
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 27 10.0
At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive eff... 27 10.0
At1g16760.1 68414.m02013 protein kinase family protein contains ... 27 10.0
>At1g63160.1 68414.m07138 replication factor C 40 kDa, putative
similar to SWISS-PROT:Q9WUK4 activator 1 40 kDa subunit
(Replication factor C 40 kDa subunit, A1 40 kDa subunit,
RF-C 40 kDa subunit, RFC40) [Mus musculus]
Length = 333
Score = 146 bits (354), Expect = 1e-35
Identities = 70/95 (73%), Positives = 82/95 (86%)
Frame = +1
Query: 226 KNDDYTMLSAALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILD 405
K L+ LLG ++K+AVLELNAS+DRGIDVVRNKIKMFAQ+KVTLPPGRHK+VILD
Sbjct: 61 KTTSILALAHELLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD 120
Query: 406 EADSMTDGAQQALRRTMELYSSTTRFALAANNSER 510
EADSMT GAQQALRRT+E+YS++TRFALA N S +
Sbjct: 121 EADSMTSGAQQALRRTIEIYSNSTRFALACNTSAK 155
Score = 104 bits (249), Expect = 7e-23
Identities = 45/80 (56%), Positives = 62/80 (77%)
Frame = +3
Query: 507 EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNN 686
+IIEPIQSRCA++R+SRLSD QIL +++ + E + Y EG+ A++FTA GD+R ALNN
Sbjct: 155 KIIEPIQSRCALVRFSRLSDQQILGRLLVVVAAEKVPYVPEGLEAIIFTADGDMRQALNN 214
Query: 687 LQSTAQGFGHISPDNVFKVC 746
LQ+T GF ++ +NVFKVC
Sbjct: 215 LQATFSGFSFVNQENVFKVC 234
Score = 88.6 bits (210), Expect = 4e-18
Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 4/66 (6%)
Frame = +2
Query: 68 SSSKST----NLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTT 235
SSS ST N PW+EKYRP DIVGNED VSRL V A+ GN PN+I++GPPG GKTT
Sbjct: 4 SSSTSTGDGYNEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 63
Query: 236 TILCLA 253
+IL LA
Sbjct: 64 SILALA 69
>At1g77470.1 68414.m09021 replication factor C 36 kDA, putative
similar to SWISS-PROT:P40937 activator 1 36 kDa subunit
(Replication factor C 36 kDa subunit, A1 36 kDa subunit,
RF-C 36 kDa subunit, RFC36) [Homo sapiens]
Length = 369
Score = 85.8 bits (203), Expect = 3e-17
Identities = 47/90 (52%), Positives = 64/90 (71%), Gaps = 3/90 (3%)
Frame = +1
Query: 241 TMLSAA--LLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQ-QKVTLPPGRHKIVILDEA 411
T+L+ A L G +++ +LELNAS+DRGIDVVR +I+ FA Q +L K+V+LDEA
Sbjct: 88 TILAVARKLYGPKYRNMILELNASDDRGIDVVRQQIQDFASTQSFSLGKSSVKLVLLDEA 147
Query: 412 DSMTDGAQQALRRTMELYSSTTRFALAANN 501
D+MT AQ ALRR +E Y+ +TRFAL N+
Sbjct: 148 DAMTKDAQFALRRVIEKYTKSTRFALIGNH 177
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = +2
Query: 65 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
P SK+T PW+EKYRPQ+ DD+ + D + + P++++ GPPG GKT+TIL
Sbjct: 33 PPQSKAT--PWVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTIL 90
Query: 245 CLAQ 256
+A+
Sbjct: 91 AVAR 94
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +3
Query: 507 EIIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNN 686
+II +QSRC R++ L + ++ + E L ++ G++A+V + GD+R ALN
Sbjct: 180 KIIPALQSRCTRFRFAPLDGVHMSQRLKHVIEAERLVVSDCGLAALVRLSNGDMRKALNI 239
Query: 687 LQST 698
LQST
Sbjct: 240 LQST 243
>At1g21690.2 68414.m02715 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 327
Score = 83.4 bits (197), Expect = 1e-16
Identities = 49/86 (56%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Frame = +1
Query: 274 FKDAVLELNASNDRGIDVVRNKIKMFAQQKVT-------LPPGRHKIVILDEADSMTDGA 432
+K VLELNAS+DRGI+VVR KIK FA V P KI+ILDEADSMT+ A
Sbjct: 60 YKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTEDA 119
Query: 433 QQALRRTMELYSSTTRFALAANNSER 510
Q ALRRTME YS TRF N R
Sbjct: 120 QNALRRTMETYSKVTRFFFICNYISR 145
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = +3
Query: 510 IIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNL 689
IIEP+ SRCA R+ LS+ + +++ ICN+E LS E +S + +QGDLR A+ L
Sbjct: 146 IIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYL 205
Query: 690 QSTAQGFG 713
QS + FG
Sbjct: 206 QSATRLFG 213
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 92 PWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLA-QLSSE 268
PW+EKYRP+ D+ E+ P+++ GPPG GKTTT L +A QL
Sbjct: 10 PWVEKYRPKQVKDVAHQEEV------------CPHMLFYGPPGTGKTTTALAIAHQLFGP 57
Query: 269 YLSKT 283
L K+
Sbjct: 58 ELYKS 62
>At1g21690.1 68414.m02714 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 339
Score = 83.4 bits (197), Expect = 1e-16
Identities = 49/86 (56%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Frame = +1
Query: 274 FKDAVLELNASNDRGIDVVRNKIKMFAQQKVT-------LPPGRHKIVILDEADSMTDGA 432
+K VLELNAS+DRGI+VVR KIK FA V P KI+ILDEADSMT+ A
Sbjct: 72 YKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTEDA 131
Query: 433 QQALRRTMELYSSTTRFALAANNSER 510
Q ALRRTME YS TRF N R
Sbjct: 132 QNALRRTMETYSKVTRFFFICNYISR 157
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = +3
Query: 510 IIEPIQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNL 689
IIEP+ SRCA R+ LS+ + +++ ICN+E LS E +S + +QGDLR A+ L
Sbjct: 158 IIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYL 217
Query: 690 QSTAQGFG 713
QS + FG
Sbjct: 218 QSATRLFG 225
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +2
Query: 92 PWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLA-QLSSE 268
PW+EKYRP+ D+ E+ V L +T + P+++ GPPG GKTTT L +A QL
Sbjct: 10 PWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGP 69
Query: 269 YLSKT 283
L K+
Sbjct: 70 ELYKS 74
>At5g27740.1 68418.m03327 expressed protein
Length = 354
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 95 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 250
W++KYRP++ D ++ +ED +L + P+++ GP G GK T I+ L
Sbjct: 3 WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMAL 54
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +1
Query: 325 VVRNKIKMFAQQKVTLPPGR--HKIVILDEADSMTDGAQQALRRTMELYSSTTRFALAAN 498
+V+ IK A+ + G+ +K+++L+E D ++ AQ +LRRTME YSS+ R L N
Sbjct: 109 IVQEIIKEMAKNRPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCN 168
Query: 499 NSER 510
+S +
Sbjct: 169 SSSK 172
>At1g24290.1 68414.m03065 AAA-type ATPase family protein similar to
Werner helicase interacting protein [Homo sapiens]
GI:14349166; contains Pfam profiles PF00004: ATPase
family associated with various cellular activities
(AAA), PF00627: UBA/TS-N domain; contains
ATP/GTP-binding site motif A (P-loop)
Length = 525
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +2
Query: 50 KKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVF---AKTGNAPNIIIAGPPG 220
K+ SSS + P E+ RP+T DD+VG + +S ++ ++ P+I+ GPPG
Sbjct: 88 KRHKLSSSSHRQHQPLSERMRPRTLDDVVGQDHLLSPSSLLRSAVESNRLPSIVFWGPPG 147
Query: 221 VGKTTTILCLAQLSSE 268
GKT+ L S +
Sbjct: 148 TGKTSIAKSLINSSKD 163
>At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT
domain-containing protein contains Pfam profiles:
PF00533 BRCA1 C Terminus (BRCT) domain, PF00004 ATPase
family associated with various cellular activities (AAA)
Length = 956
Score = 44.4 bits (100), Expect = 8e-05
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 24/93 (25%)
Frame = +2
Query: 53 KQVKPSSSKS----TNLPWIEKYRPQTFDDIVGNEDTVSRL--------AVFAKTGNAPN 196
K+V P+ K+ T+LPW EKYRP+ ++IVGN+ V++L F TG+
Sbjct: 324 KKVPPAKGKNKIIETSLPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGK 383
Query: 197 ------------IIIAGPPGVGKTTTILCLAQL 259
++++G PG+GKTT+ ++Q+
Sbjct: 384 GKKLNDAGSKKAVLLSGTPGIGKTTSAKLVSQM 416
>At1g14460.1 68414.m01715 DNA polymerase-related weak similarity to
DNA polymerase III holoenzyme tau subunit [Thermus
thermophilus] GI:2583049
Length = 1116
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 101 EKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNI-IIAGPPGVGKTTTILCLA 253
+KY+P FD+++G V L K G ++ + GP G GKT+T L+
Sbjct: 426 QKYKPMFFDELIGQSIVVQSLMNAVKKGRVAHVYLFQGPRGTGKTSTARILS 477
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 522 IQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNLQ 692
IQSRC ++++ D I+ ++ +I + ENL + + + A G LR A L+
Sbjct: 587 IQSRCQKYIFNKVRDGDIVVRLRKIASDENLDVESQALDLIALNADGSLRDAETMLE 643
>At5g66130.1 68418.m08331 cell cycle checkpoint protein-related weak
similarity to cell cycle checkpoint protein RAD17 [Homo
sapiens] GI:4102916
Length = 599
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 8/64 (12%)
Frame = +2
Query: 74 SKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAV-------FAKTGNAPNI-IIAGPPGVGK 229
SK+T+L W++KYRP+T +++ ++ V + + F K G N+ ++ G GVGK
Sbjct: 87 SKNTDL-WVDKYRPRTLEELSVHKKKVDEVKLWFQESLDFLKNGLRNNVLLVTGQAGVGK 145
Query: 230 TTTI 241
+ TI
Sbjct: 146 SATI 149
>At2g02480.1 68415.m00187 DNA polymerase-related weak similarity to
DNA polymerase III holoenzyme tau subunit [Thermus
thermophilus] GI:2583049
Length = 1218
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 71 SSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGN-APNIIIAGPPGVGKTTT 238
S+ T + +KYRP F++++G V L K AP + GP G GKT+T
Sbjct: 443 STPETIRSFSQKYRPMFFEELIGQSIVVQSLMNAVKRSRIAPVYLFQGPRGTGKTST 499
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 522 IQSRCAVLRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNLQ 692
IQSRC + +L D+ I+ ++ +I + ENL + + A G LR A L+
Sbjct: 613 IQSRCQKFLFDKLKDSDIVVRLKKIASDENLDVDLHALDLIAMNADGSLRDAETMLE 669
>At4g24790.1 68417.m03550 expressed protein ; expression supported
by MPSS
Length = 815
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 101 EKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNI-IIAGPPGVGKTTT 238
+K+RP++FD++VG E V L G ++ + GP G GKT+T
Sbjct: 243 QKFRPKSFDELVGQEVVVKCLLSTILRGRITSVYLFHGPRGTGKTST 289
>At5g45720.1 68418.m05621 hypothetical protein
Length = 900
Score = 34.7 bits (76), Expect = 0.066
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 62 KPSSSKST--NLPWIEKYRPQTFDDIVGNEDTVSRLA-VFAKTGNAPNIIIAGPPGVGKT 232
K SS K+T + + +KY P+TF D++G V L+ AK + GP G GKT
Sbjct: 332 KKSSRKNTRWHQSFTQKYAPRTFRDLLGQNLVVQALSNAIAKRRVGLLYVFHGPNGTGKT 391
Query: 233 T 235
+
Sbjct: 392 S 392
>At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identical
to heat shock protein 101 GI:6715468 GB:AAF26423 from
[Arabidopsis thaliana]
Length = 911
Score = 34.3 bits (75), Expect = 0.087
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Frame = +2
Query: 47 EKKQVKPSSSKSTNLPWIEKY------RPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIA 208
E K+V+ S+S TN ++ Y + D ++G ++ + R+ N ++
Sbjct: 148 EGKKVE-SASGDTNFQALKTYGRDLVEQAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLI 206
Query: 209 GPPGVGKTTTILCLAQ 256
G PGVGKT + LAQ
Sbjct: 207 GEPGVGKTAVVEGLAQ 222
>At5g18370.1 68418.m02161 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1210
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 107 YRP-QTFDDIVGNEDTVSRL--AVFAKTGNAPNIIIAGPPGVGKTTTILCLAQLSSE 268
Y P + FDD VG ++R+ + ++ + I I GPPG+GKTT L SE
Sbjct: 225 YTPSRDFDDYVGIRPHITRINSLLCLESSDVRMIGILGPPGIGKTTIARVLYDQISE 281
>At1g04730.1 68414.m00469 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 954
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +1
Query: 286 VLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMELY 465
V+E+NAS++R + +I Q R K +++DE D + A+ +++
Sbjct: 373 VVEINASDERSASAIETRILDVVQMNSVTADSRPKCLVIDEIDGALGDGKGAVDVILKMV 432
Query: 466 SSTTRFALAANNSE 507
+ + A N E
Sbjct: 433 LAERKHATGKENVE 446
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +2
Query: 95 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNA 190
W++KY P +F +++ +E T + ++ K +A
Sbjct: 234 WVDKYSPSSFTELLSDEQTNREVLLWLKQWDA 265
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 594 ICNKENLSYTEEGVSAVVFTAQGDLRSALNNLQ 692
ICN E + +SA+ + D+RS LN LQ
Sbjct: 511 ICNMEGMKARSFALSALAEYTECDIRSCLNTLQ 543
>At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 964
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 101 EKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQ 256
E R D ++G +D + R N +I G PGVGKT LAQ
Sbjct: 251 EMARRGKLDPVIGRDDEIRRCIQILCRRTKNNPVIIGEPGVGKTAIAEGLAQ 302
>At5g46470.1 68418.m05723 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1127
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +2
Query: 122 FDDIVGNEDTVSRLA--VFAKTGNAPNIIIAGPPGVGKTTTILCL-AQLSSEYLS 277
F+D+VG ED +++++ + ++ + I GP G+GKTT L ++LS ++ S
Sbjct: 184 FEDLVGIEDHITKMSSLLHLESEEVRMVGIWGPSGIGKTTIARALFSRLSCQFQS 238
>At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 968
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 110 RPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQ 256
R D ++G +D + R N ++ G PGVGKT LAQ
Sbjct: 249 REGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQ 297
>At3g04210.1 68416.m00445 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 531
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 122 FDDIVGNEDTVSRLA--VFAKTGNAPNIIIAGPPGVGKTTTILCLAQLSSE 268
F D+VG ED + +L ++ + I I GPPG+GKT+ L + S+
Sbjct: 237 FSDLVGMEDHMKKLERMLYLDLNDVRMIGIWGPPGIGKTSIARVLFRKHSD 287
>At1g01300.1 68414.m00046 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 485
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -1
Query: 548 PEYSTPRLYGFYYLSLL-LAANAKRVVLEYSSMVRLNAC*APSVMLSASSSITILCRP 378
P S P+L FYY+ LL ++ RV +S+ +L+ V++ + +S+T L RP
Sbjct: 319 PLLSNPKLDTFYYVGLLGISVGGTRVPGVTASLFKLDQIGNGGVIIDSGTSVTRLIRP 376
>At5g60340.1 68418.m07564 maoC-like dehydratase domain-containing
protein contains similarity to (R)-specific enoyl-CoA
hydratase PhaJ1 [Pseudomonas oleovorans]
gi|22506675|gb|AAM97601; contains Pfam domain PF01575:
MaoC like domain
Length = 337
Score = 31.9 bits (69), Expect = 0.46
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 191 PNIIIAGPPGVGKTTTILCLAQLSS 265
PN++I G PG GK+TT LA+ ++
Sbjct: 14 PNLLITGTPGTGKSTTASALAEATN 38
>At3g61820.1 68416.m06939 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 483
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -1
Query: 548 PEYSTPRLYGFYYLSLL-LAANAKRVVLEYSSMVRLNAC*APSVMLSASSSITILCRP 378
P + P+L FYYL LL ++ RV S +L+A V++ + +S+T L +P
Sbjct: 318 PLLTNPKLDTFYYLQLLGISVGGSRVPGVSESQFKLDATGNGGVIIDSGTSVTRLTQP 375
>At4g18820.1 68417.m02778 expressed protein
Length = 1111
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 101 EKYRPQTFDDIVGNEDTVSRLA-VFAKTGNAPNIIIAGPPGVGKTT 235
EKY P+TF D++G V L+ A+ + GP G GKT+
Sbjct: 435 EKYTPKTFRDLLGQNLVVQALSNAVARRKLGLLYVFHGPNGTGKTS 480
>At2g03270.1 68415.m00280 DNA-binding protein, putative similar to
Swiss-Prot:Q60560 DNA-binding protein SMUBP-2
(Immunoglobulin MU binding protein 2) (SMUBP-2) (Insulin
II gene enhancer-binding protein)(RIPE3B-binding complex
3B2 P110 subunit) (RIP-1)[Mesocricetus auratus];
identical to putative helicase (atpc-2 gene) cDNA
NCBI_gi:11191230
Length = 639
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 92 PWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
P + K ++F N D + A+ + ++ GPPG GKTTT++
Sbjct: 173 PSVSKKDVKSFTPFNKNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVV 223
>At1g77620.1 68414.m09037 expressed protein
Length = 1151
Score = 31.1 bits (67), Expect = 0.81
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +2
Query: 53 KQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTV 154
++ SS + N W++KY+P++ ++ GN ++V
Sbjct: 299 RESNDSSGQPCNRLWVDKYQPRSASEVCGNTESV 332
>At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1193
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 176 KTGNAPNIIIAGPPGVGKTTTILCLAQLSSEYLSKTPY 289
++G+ I I GPPG+GKTT L SE T +
Sbjct: 210 ESGDVRMIGIVGPPGIGKTTIARALRDQISENFQLTAF 247
>At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP101,
putative similar to heat shock protein 101 GI:6715468
GB:AAF26423 from [Arabidopsis thaliana]
Length = 623
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 125 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAQ 256
D ++G + R+ N ++ G PGVGKT + LAQ
Sbjct: 144 DPVIGRHREIRRVIEVLSRRTKNNPVLIGEPGVGKTAVVEGLAQ 187
>At3g44400.1 68416.m04770 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1007
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 122 FDDIVGNEDTVSRLAVFAKTG--NAPNIIIAGPPGVGKTTTILCL 250
FDD VG + R + I I GPPG+GKTT C+
Sbjct: 210 FDDFVGMAAHMERTEQLLRLDLDEVRMIGILGPPGIGKTTIATCM 254
>At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 896
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 122 FDDIVGNEDTVSRLAVFAK--TGNAPNIIIAGPPGVGKTT 235
FDD++G D + ++ + I I GPPGVGKTT
Sbjct: 234 FDDLIGMGDHMEKMKPLLDIDSDEMKTIGIWGPPGVGKTT 273
>At5g66005.2 68418.m08311 Expressed protein
Length = 164
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 182 GNAPNIIIAGPPGVGKTTTIL 244
G +++ GPPGVGKTT I+
Sbjct: 3 GTGKCLLVTGPPGVGKTTLIM 23
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Frame = +2
Query: 71 SSKSTNLPWIEKYRPQT--------FDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVG 226
SS ++ +P +E+Y D +VG + + R+ N + G PGVG
Sbjct: 269 SSGNSKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERMVQILARRTKNNPCLIGEPGVG 328
Query: 227 KTTTILCLAQ 256
KT LAQ
Sbjct: 329 KTAIAEGLAQ 338
>At4g19500.1 68417.m02868 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein. A false
intron was added between exons 2 and 3 to circumvent a
frameshift caused by a sequencing error, as per Blake
Meyers (bcmeyers@vegmail.ucdavis.edu)
Length = 1308
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +2
Query: 122 FDDIVGNEDTVSRLAVFA--KTGNAPNIIIAGPPGVGKTTTILCL-AQLSSEY 271
F DIVG E + ++ K+ A + I+GP G+GKTT L ++LS ++
Sbjct: 180 FSDIVGIEAHLEAMSSILRLKSEKARMVGISGPSGIGKTTIAKALFSKLSPQF 232
>At2g29940.1 68415.m03642 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1426
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 200 IIAGPPGVGKTTTILCLAQLSSEYLSKT 283
++ GPPG GK+T +L LA + L KT
Sbjct: 190 LLLGPPGSGKSTLLLALAGKLDKSLKKT 217
>At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to RNA
helicase SDE3 [Arabidopsis thaliana] GI:13811296
Length = 1002
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 140 NEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 244
N + + + + AP +I GPPG GKT T++
Sbjct: 398 NAEQICSIEMVLGCKGAPPYVIHGPPGTGKTMTLV 432
>At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding
subunit / ClpC almost identical to ClpC GI:2921158 from
[Arabidopsis thaliana]; contains Pfam profile PF02861:
Clp amino terminal domain; contains Pfam profile
PF00004: ATPase, AAA family; contains Pfam profile
PF02151: UvrB/uvrC motif
Length = 929
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 8/69 (11%)
Frame = +2
Query: 74 SKSTNLPWIEKYRPQT--------FDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGK 229
S S +P +E+Y D +VG + + R+ N + G PGVGK
Sbjct: 249 SSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 308
Query: 230 TTTILCLAQ 256
T LAQ
Sbjct: 309 TAIAEGLAQ 317
>At5g50340.1 68418.m06235 DNA repair protein-related similar to RadA
[Pseudomonas aeruginosa] GI:1881700
Length = 491
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 182 GNAPN--IIIAGPPGVGKTTTILCLAQLSSE 268
G AP I+I G PG+GK+T +L +A + +E
Sbjct: 112 GLAPGSLILIGGDPGIGKSTLLLQIASIIAE 142
>At5g22330.1 68418.m02605 TATA box-binding protein-interacting
protein-related similar to TATA box-binding
protein-interacting protein SP:O35753 from [ Mus
musculus]
Length = 458
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQLSSEYLSKTPY 289
+++AGPPG GKT L ++Q E SK P+
Sbjct: 69 LLLAGPPGTGKTALALGISQ---ELGSKVPF 96
>At5g17970.1 68418.m02108 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 780
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +2
Query: 122 FDDIVGNEDTVSRL-AVFAKTGNAPNII-IAGPPGVGKTT-TILCLAQLSS 265
F+D++G E V+ L ++ N +I + GP G+GKTT T + QLSS
Sbjct: 187 FEDLLGLEAHVANLKSMLGLESNEVKMIGVWGPAGIGKTTITRILYNQLSS 237
>At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 818
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCL 250
++I GPPG GKT TIL +
Sbjct: 276 VLIQGPPGTGKTQTILSI 293
>At1g73170.1 68414.m08466 expressed protein
Length = 666
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/27 (48%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +2
Query: 194 NIIIAGPPGVGKTTTILCLAQ-LSSEY 271
++++ GPPGVGKTT I +A+ L ++Y
Sbjct: 199 SLLLIGPPGVGKTTMIREVARMLGNDY 225
>At1g63740.1 68414.m07213 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 992
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 122 FDDIVGNEDTVSRLAVFAKTGNAPNIIIAG---PPGVGKTTTILCLAQLSSEYLSKT 283
F+D+VG E + ++ N +I G P G+GKTT L L S+ T
Sbjct: 141 FEDMVGVETHLEKIQSLLHLDNDDEAMIVGIYGPAGIGKTTIARALHSLLSDRFQLT 197
>At1g63730.1 68414.m07212 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 966
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +2
Query: 122 FDDIVGNEDTVSRLAVFAKTGNAPNIIIAG---PPGVGKTTTILCL-AQLSSEY 271
F+D+VG E + ++ N +I G P G+GKTT L ++LSS +
Sbjct: 183 FEDMVGIEAHLQKMQSLLHLDNEDEAMIVGICGPSGIGKTTIARALHSRLSSSF 236
>At5g38340.1 68418.m04627 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1059
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +2
Query: 122 FDDIVGNEDTVSRL-AVFAKTGNAPNII-IAGPPGVGKTT 235
FDD++G E + ++ ++ + N +I I GP G+GKTT
Sbjct: 228 FDDLIGMEAHMEKMKSLLSLHSNEVKMIGIWGPSGIGKTT 267
>At4g24710.1 68417.m03536 AAA-type ATPase family protein similar to
HPV16 E1 protein binding protein [Homo sapiens]
gi|2232019|gb|AAB64095; contains Pfam domain, PF00004:
ATPase, AAA family ('A'TPases 'A'ssociated with diverse
cellular 'A'ctivities)
Length = 467
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQ-LSSEYLSKTPY 289
I++ GPPG GKT+ LAQ LS S+ P+
Sbjct: 205 ILLHGPPGTGKTSLCKALAQKLSIRCNSRYPH 236
>At3g28610.1 68416.m03571 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 473
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 13/76 (17%)
Frame = +2
Query: 71 SSKSTNLPWIEKYRPQTFDDIVGN----EDTVSRLAVF-------AKTGNA--PNIIIAG 211
SSK++ +I+ P TF+ + + E ++ LA F K G A ++ G
Sbjct: 184 SSKTSFWRYIDFEHPATFETLAMDPKKKEQILNDLAAFNNGKDYYKKIGKAWKRGYLLYG 243
Query: 212 PPGVGKTTTILCLAQL 259
PPG GK+T I +A L
Sbjct: 244 PPGTGKSTMIAAMANL 259
>At3g27730.1 68416.m03462 ATP-dependent DNA helicase, putative
similar to SP|P51979 ATP-dependent DNA helicase MER3 (EC
3.6.1.-) {Saccharomyces cerevisiae}; contains Pfam
profiles PF00270: DEAD/DEAH box helicase, PF02889: Sec63
domain
Length = 1113
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 194 NIIIAGPPGVGKTTTI-LCLAQLSSEYLSK 280
N+II+ P G GKT LC+ +L S+ +SK
Sbjct: 42 NMIISAPTGSGKTVLFELCILRLFSKSISK 71
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +2
Query: 170 FAKTGNAP--NIIIAGPPGVGKTTTI-LCLAQLSSEYL 274
F K G P +++ GPPG GKT C AQ ++ +L
Sbjct: 197 FEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFL 234
>At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1215
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 122 FDDIVGNEDTVSRLAVFAKTGNAPNIIIA--GPPGVGKTTTILCL-AQLSSEY 271
FD +VG + +L + + +I GPPG+GKTT + L QLSS +
Sbjct: 227 FDGLVGMGAHMEKLELLLCLDSCEVRMIGIWGPPGIGKTTIVRFLYNQLSSSF 279
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTILCLAQLS 262
I++ G PGVGKT+ IL L + S
Sbjct: 1748 ILLEGSPGVGKTSLILALGKYS 1769
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +2
Query: 170 FAKTGNAP--NIIIAGPPGVGKTTTI-LCLAQLSSEYL 274
F K G P +++ GPPG GKT C AQ ++ +L
Sbjct: 196 FEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFL 233
>At5g61730.1 68418.m07746 ABC transporter family protein contains
Pfam profile: PF00005 ABC transporter
Length = 940
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 203 IAGPPGVGKTTTILCLAQLS 262
+ GP G GKTTTI CL ++
Sbjct: 554 LLGPNGAGKTTTISCLTGIN 573
>At5g61690.1 68418.m07740 ABC transporter family protein ABC
transport protein, Dictyostelium discoideum, PIR:T18288
Length = 954
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 203 IAGPPGVGKTTTILCLAQLS 262
+ GP G GKTTTI CL ++
Sbjct: 540 LLGPNGAGKTTTISCLTGIN 559
>At3g47730.1 68416.m05200 ABC transporter family protein AbcA,
Dictyostelium discoideum, DDU66526
Length = 983
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 203 IAGPPGVGKTTTILCLAQL 259
+ GP G GKTTTI CL L
Sbjct: 562 LLGPNGAGKTTTINCLTGL 580
>At1g33290.2 68414.m04118 sporulation protein-related isoform
contains non-consensus AT-donor acceptor site at intron
6; similar to Stage III sporulation protein AA.
(Swiss-Prot:Q01367) [Bacillus subtilis]; similar to
SpoIIIAA (GI:1303904) [Bacillus subtilis]; similar to
stage III sporulation protein AA (GI:18145497)
[Clostridium perfringens str. 13]
Length = 303
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 194 NIIIAGPPGVGKTTTILCLAQLSSEYLSK 280
+I+ G PGVGKTT + +A++ S+ K
Sbjct: 166 SILFVGRPGVGKTTVLREIARVLSDEFQK 194
>At1g33290.1 68414.m04117 sporulation protein-related isoform
contains non-consensus AT-donor acceptor site at intron
6; similar to Stage III sporulation protein AA.
(Swiss-Prot:Q01367) [Bacillus subtilis]; similar to
SpoIIIAA (GI:1303904) [Bacillus subtilis]; similar to
stage III sporulation protein AA (GI:18145497)
[Clostridium perfringens str. 13]
Length = 379
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 194 NIIIAGPPGVGKTTTILCLAQLSSEYLSK 280
+I+ G PGVGKTT + +A++ S+ K
Sbjct: 166 SILFVGRPGVGKTTVLREIARVLSDEFQK 194
>At1g16280.1 68414.m01949 DEAD/DEAH box helicase, putative similar
to gb|L13612 DEAD-box protein (dbp45A) from Drosophila
melanogaster and is a member of PF|00270 DEAD/DEAH box
helicase family
Length = 491
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +1
Query: 337 KIKMFAQQKVTLPP--GRHKIVILDEADSMTD-GAQQALR 447
+IK+ + +PP R K ++LDEAD + D G Q LR
Sbjct: 186 RIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELR 225
>At5g57480.1 68418.m07183 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 520
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 110 RPQTFDDIVGNEDTVSRLAVFAKTGNA--PNIIIAGPPGVGKTTTILCLA 253
+ Q DD+ +D + KTG A ++ GPPG GK++ I +A
Sbjct: 212 KQQIMDDL---KDFAEGQVFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
>At5g06530.2 68418.m00737 ABC transporter family protein
Length = 691
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 47 EKKQVKPSSSKSTNLPWIEKYRPQTFDDIVGN-EDTVSRLAVFAKTGNA-PNIIIA--GP 214
E + KP LP K+R T+ ++ +V + + +G+ P ++A GP
Sbjct: 139 EAGKKKPKFQAEPTLPIFLKFRDVTYKVVIKKLTSSVEKEILTGISGSVNPGEVLALMGP 198
Query: 215 PGVGKTTTILCLA 253
G GKTT + LA
Sbjct: 199 SGSGKTTLLSLLA 211
>At5g06530.1 68418.m00736 ABC transporter family protein
Length = 751
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 47 EKKQVKPSSSKSTNLPWIEKYRPQTFDDIVGN-EDTVSRLAVFAKTGNA-PNIIIA--GP 214
E + KP LP K+R T+ ++ +V + + +G+ P ++A GP
Sbjct: 139 EAGKKKPKFQAEPTLPIFLKFRDVTYKVVIKKLTSSVEKEILTGISGSVNPGEVLALMGP 198
Query: 215 PGVGKTTTILCLA 253
G GKTT + LA
Sbjct: 199 SGSGKTTLLSLLA 211
>At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 271 SFKDAVLELNASNDRGID-VVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQ 438
S + L LN +ND I+ ++ +I + + + G+H +VIL + S D ++
Sbjct: 230 SMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALRE 286
>At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 271 SFKDAVLELNASNDRGID-VVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQ 438
S + L LN +ND I+ ++ +I + + + G+H +VIL + S D ++
Sbjct: 230 SMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALRE 286
>At4g25835.1 68417.m03716 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 506
Score = 27.9 bits (59), Expect = 7.6
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Frame = +2
Query: 71 SSKSTNLPW--IEKYRPQTFD----DIVGNEDTVSRLAVFA-------KTGNA--PNIII 205
S S LPW + P TFD D V + + L FA +TG A ++
Sbjct: 183 SLDSRGLPWESVPFKHPSTFDTLAMDPVKKQQIMEDLKDFAECQSFYERTGRAWKRGYLL 242
Query: 206 AGPPGVGKTTTILCLA 253
GPPG GK++ I +A
Sbjct: 243 YGPPGTGKSSMIAAMA 258
>At4g15236.1 68417.m02335 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1388
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 200 IIAGPPGVGKTTTILCLA 253
++ GPPG GKTT +L L+
Sbjct: 166 LLLGPPGCGKTTLLLALS 183
>At3g10420.2 68416.m01250 sporulation protein-related similar to
hypothetical proteins: GB:P51281 [Chloroplast Porphyra
purpurea], GB:BAA16982 [Synechocystis sp], GB:P49540
[Odontella sinensis], GB:AAB82669 [Chloroplast Cyanidium
caldarium]; similar to stage III sporulation protein AA
(GI:18145497) [Clostridium perfringens str. 13]; similar
to stage III sporulation protein AA (mutants block
sporulation after engulfment) (GI:22777578)
[Oceanobacillus iheyensis]
Length = 684
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 194 NIIIAGPPGVGKTTTILCLAQLSSE 268
+I++ G PGVGKTT I +A++ ++
Sbjct: 215 SILVIGSPGVGKTTLIREIARMLAD 239
>At3g10420.1 68416.m01249 sporulation protein-related similar to
hypothetical proteins: GB:P51281 [Chloroplast Porphyra
purpurea], GB:BAA16982 [Synechocystis sp], GB:P49540
[Odontella sinensis], GB:AAB82669 [Chloroplast Cyanidium
caldarium]; similar to stage III sporulation protein AA
(GI:18145497) [Clostridium perfringens str. 13]; similar
to stage III sporulation protein AA (mutants block
sporulation after engulfment) (GI:22777578)
[Oceanobacillus iheyensis]
Length = 547
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 194 NIIIAGPPGVGKTTTILCLAQLSSE 268
+I++ G PGVGKTT I +A++ ++
Sbjct: 215 SILVIGSPGVGKTTLIREIARMLAD 239
>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 603
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 152 VSRLAVFAKTGNAP--NIIIAGPPGVGKTT 235
+ A F K G +P I++ GPPG KTT
Sbjct: 306 IKHSAAFVKMGISPMRGILLHGPPGCSKTT 335
>At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATPase
B subunit / vacuolar proton pump B subunit / V-ATPase 57
kDa subunit identical to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}
Length = 486
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 271 SFKDAVLELNASNDRGID-VVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQ 438
S + L LN +ND I+ ++ +I + + + G+H +VIL + S D ++
Sbjct: 229 SMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALRE 285
>At1g63880.1 68414.m07234 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1017
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 122 FDDIVGNEDTVSRLAVFAKTGNAPN--IIIAGPPGVGKTTTILCLAQLSSE 268
FD +VG E + + N + IAGP G+GKTT L L S+
Sbjct: 184 FDGMVGIEAHLREIKSLLDLDNVEVKIVAIAGPAGIGKTTIARALYGLLSK 234
>At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 330
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 271 SFKDAVLELNASNDRGID-VVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQ 438
S + L LN +ND I+ ++ +I + + + G+H +VIL + S D ++
Sbjct: 230 SMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALRE 286
>At1g15520.1 68414.m01867 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1423
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 200 IIAGPPGVGKTTTILCLAQLSSEYLSKT 283
++ GPP GKTT +L LA + L +T
Sbjct: 184 LLLGPPSSGKTTLLLALAGKLDQELKQT 211
>At5g66910.1 68418.m08434 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 815
Score = 27.5 bits (58), Expect = 10.0
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +2
Query: 197 IIIAGPPGVGKTTTI 241
++++GPPG GKTT +
Sbjct: 192 VVVSGPPGCGKTTLV 206
>At5g43470.2 68418.m05315 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein. Closest
Col-0 homolog to RPP8
Length = 908
Score = 27.5 bits (58), Expect = 10.0
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 101 EKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNII-IAGPPGVGKTT 235
+ Y + D+VG E +V L + ++ IAG G+GKTT
Sbjct: 155 QTYPDSSESDLVGVEQSVKELVGHLVENDVHQVVSIAGMGGIGKTT 200
>At5g43470.1 68418.m05314 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein. Closest
Col-0 homolog to RPP8
Length = 908
Score = 27.5 bits (58), Expect = 10.0
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 101 EKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNII-IAGPPGVGKTT 235
+ Y + D+VG E +V L + ++ IAG G+GKTT
Sbjct: 155 QTYPDSSESDLVGVEQSVKELVGHLVENDVHQVVSIAGMGGIGKTT 200
>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
contains Pfam profile: ATPase family PF00004
gene_id:K17E7.100 contains Pfam profile: ATPase family
PF00004
Length = 533
Score = 27.5 bits (58), Expect = 10.0
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 116 QTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLA 253
+ D VG +D R+ K G ++ GPPG GK++ + +A
Sbjct: 225 EDLDRFVGRKDFYKRVGKAWKRG----YLLYGPPGTGKSSLVAAMA 266
>At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1095
Score = 27.5 bits (58), Expect = 10.0
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 122 FDDIVGNEDTVSRL-AVFAKTGNAPNII-IAGPPGVGKTT 235
F+D+VG E ++++ ++ I+ I GP GVGKTT
Sbjct: 181 FNDLVGMEAHIAKMESLLCLESQGVRIVGIWGPAGVGKTT 220
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 27.5 bits (58), Expect = 10.0
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 122 FDDIVGNEDTVSRLAVFA--KTGNAPNIIIAGPPGVGKTT 235
FD+ G ED + L++ ++ + I GP G+GKTT
Sbjct: 178 FDEFFGIEDHIKELSLLLCLESEEVRMVGIWGPTGIGKTT 217
>At1g72860.1 68414.m08427 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1163
Score = 27.5 bits (58), Expect = 10.0
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 110 RPQTFDDIVGNEDTVSRLAVFAK--TGNAPNII-IAGPPGVGKTTTILCL 250
+P F DIVG + RL+ + N +I I G G+GKTT CL
Sbjct: 177 QPVDFSDIVGMNAHMERLSPLLSMDSENEVRMIGIWGMGGIGKTTIAKCL 226
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 27.5 bits (58), Expect = 10.0
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 304 SNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADS-MTDGAQQALRRTMELYSSTTR 480
+++ G D +R+ + +Q V P I+DE DS + D + L + E + R
Sbjct: 892 NSELGFDYLRDNLTSNREQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEANENAAR 951
Query: 481 FALAANNSE 507
+ +AA +E
Sbjct: 952 YPVAAKVAE 960
>At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1939
Score = 27.5 bits (58), Expect = 10.0
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 200 IIAGPPGVGKTTTILCL 250
+I GPPG GKT TI+ +
Sbjct: 1128 LIQGPPGTGKTRTIVAI 1144
>At1g16760.1 68414.m02013 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 758
Score = 27.5 bits (58), Expect = 10.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 400 LDEADSMTDGAQQALRRTMELYSSTTRFALAANN 501
L++ ++ + L++TM++YSS R AL A N
Sbjct: 322 LNDVEAQMKRLRLELKQTMDMYSSACREALTARN 355
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,432,426
Number of Sequences: 28952
Number of extensions: 315365
Number of successful extensions: 1206
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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