Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30424
(807 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064590-1|AAH64590.1| 306|Homo sapiens Yip1 domain family, mem... 77 6e-14
BC013014-1|AAH13014.1| 316|Homo sapiens Yip1 domain family, mem... 77 1e-13
BC000056-1|AAH00056.1| 316|Homo sapiens YIPF2 protein protein. 77 1e-13
AF162672-1|AAM21161.1| 350|Homo sapiens natural killer cell-spe... 43 0.001
AK000946-1|BAA91439.1| 350|Homo sapiens protein ( Homo sapiens ... 43 0.002
CR533541-1|CAG38572.1| 315|Homo sapiens C6orf109 protein. 42 0.003
BC019297-1|AAH19297.1| 350|Homo sapiens Yip1 domain family, mem... 42 0.003
AL355802-9|CAI42626.1| 303|Homo sapiens RP3-337H4.3 protein. 42 0.003
AL355802-8|CAI42624.1| 225|Homo sapiens RP3-337H4.3 protein. 42 0.003
AL355802-7|CAI42623.1| 315|Homo sapiens RP3-337H4.3 protein. 42 0.003
AK022757-1|BAB14231.1| 350|Homo sapiens protein ( Homo sapiens ... 42 0.003
AK021655-1|BAB13866.1| 350|Homo sapiens protein ( Homo sapiens ... 42 0.003
AK021433-1|BAB13824.1| 280|Homo sapiens protein ( Homo sapiens ... 42 0.003
AB065543-1|BAC05788.1| 324|Homo sapiens seven transmembrane hel... 32 2.8
AB065452-1|BAC05714.1| 324|Homo sapiens seven transmembrane hel... 32 2.8
BC115737-1|AAI15738.1| 1272|Homo sapiens UPF2 regulator of nonse... 30 8.6
BC114964-1|AAI14965.1| 1272|Homo sapiens UPF2 regulator of nonse... 30 8.6
AY013249-1|AAG48509.1| 1272|Homo sapiens hUPF2 protein. 30 8.6
AL645617-1|CAI16755.1| 1272|Homo sapiens UPF2 regulator of nonse... 30 8.6
AL138898-4|CAH73458.1| 1272|Homo sapiens UPF2 regulator of nonse... 30 8.6
AF318574-1|AAG60689.1| 1272|Homo sapiens UPF2 protein. 30 8.6
AF301013-1|AAG33225.1| 1272|Homo sapiens regulator of nonsense t... 30 8.6
AB037829-1|BAA92646.1| 1298|Homo sapiens KIAA1408 protein protein. 30 8.6
>BC064590-1|AAH64590.1| 306|Homo sapiens Yip1 domain family, member
1 protein.
Length = 306
Score = 77.4 bits (182), Expect = 6e-14
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +2
Query: 509 QKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLIFTIAVSGNIA 688
Q +FDV T +V +RI S+LP +N+ I+ PDLYGP WI TL+F IA+SGN++
Sbjct: 83 QTFFDVDTYQVFDRIKGSLLPIP-GKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLS 141
Query: 689 SYLQNV-NKAVHWRYDFHLVSYAATA*YVTFGW 784
++L ++ K H+ +F VS AAT Y + W
Sbjct: 142 NFLIHLGEKTYHYVPEFRKVSIAATIIY-AYAW 173
>BC013014-1|AAH13014.1| 316|Homo sapiens Yip1 domain family, member
2 protein.
Length = 316
Score = 76.6 bits (180), Expect = 1e-13
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = +2
Query: 509 QKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLIFTIAVSGNIA 688
Q +FDV TS+V++RI S+LP+ N+ ++ +PDLYGP WI TL F +AV+GN+
Sbjct: 84 QSFFDVDTSQVLDRIKGSLLPRP-GHNFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLT 142
Query: 689 SYL-QNVNKAVHWRYDFHLVSYAATA*YVTFGW 784
L Q + ++H+ FH V+ A + Y + W
Sbjct: 143 LVLAQRRDPSIHYSPQFHKVTVAGISIY-CYAW 174
>BC000056-1|AAH00056.1| 316|Homo sapiens YIPF2 protein protein.
Length = 316
Score = 76.6 bits (180), Expect = 1e-13
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = +2
Query: 509 QKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLIFTIAVSGNIA 688
Q +FDV TS+V++RI S+LP+ N+ ++ +PDLYGP WI TL F +AV+GN+
Sbjct: 84 QSFFDVDTSQVLDRIKGSLLPRP-GHNFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLT 142
Query: 689 SYL-QNVNKAVHWRYDFHLVSYAATA*YVTFGW 784
L Q + ++H+ FH V+ A + Y + W
Sbjct: 143 LVLAQRRDPSIHYSPQFHKVTVAGISIY-CYAW 174
>AF162672-1|AAM21161.1| 350|Homo sapiens natural killer
cell-specific antigen KLIP1 protein.
Length = 350
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/52 (40%), Positives = 36/52 (69%)
Frame = +2
Query: 503 VLQKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLI 658
+L+ YFDV+ ++V R++ S++P K+ F +KI G +LYGP+ + LTL+
Sbjct: 117 ILRPYFDVEPAQVRSRLLESMIPIKMVN--FPQKIAG--ELYGPLMLVLTLV 164
>AK000946-1|BAA91439.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ10084 fis, clone HEMBA1002125. ).
Length = 350
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/52 (40%), Positives = 35/52 (67%)
Frame = +2
Query: 503 VLQKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLI 658
+L+ YFDV+ ++V R++ S++P KV F +KI G +LYGP+ + TL+
Sbjct: 117 ILRPYFDVEPAQVRSRLLESMIPIKVVN--FPQKIAG--ELYGPLMLVFTLV 164
>CR533541-1|CAG38572.1| 315|Homo sapiens C6orf109 protein.
Length = 315
Score = 41.5 bits (93), Expect = 0.003
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = +2
Query: 503 VLQKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLI 658
+L+ YFDV+ ++V R++ S++P K+ F +KI G +LYGP+ + TL+
Sbjct: 82 ILRPYFDVEPAQVRSRLLESMIPIKMVN--FPQKIAG--ELYGPLMLVFTLV 129
>BC019297-1|AAH19297.1| 350|Homo sapiens Yip1 domain family, member
3 protein.
Length = 350
Score = 41.5 bits (93), Expect = 0.003
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = +2
Query: 503 VLQKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLI 658
+L+ YFDV+ ++V R++ S++P K+ F +KI G +LYGP+ + TL+
Sbjct: 117 ILRPYFDVEPAQVRSRLLESMIPIKMVN--FPQKIAG--ELYGPLMLVFTLV 164
>AL355802-9|CAI42626.1| 303|Homo sapiens RP3-337H4.3 protein.
Length = 303
Score = 41.5 bits (93), Expect = 0.003
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = +2
Query: 503 VLQKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLI 658
+L+ YFDV+ ++V R++ S++P K+ F +KI G +LYGP+ + TL+
Sbjct: 160 ILRPYFDVEPAQVRSRLLESMIPIKMVN--FPQKIAG--ELYGPLMLVFTLV 207
>AL355802-8|CAI42624.1| 225|Homo sapiens RP3-337H4.3 protein.
Length = 225
Score = 41.5 bits (93), Expect = 0.003
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = +2
Query: 503 VLQKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLI 658
+L+ YFDV+ ++V R++ S++P K+ F +KI G +LYGP+ + TL+
Sbjct: 82 ILRPYFDVEPAQVRSRLLESMIPIKMVN--FPQKIAG--ELYGPLMLVFTLV 129
>AL355802-7|CAI42623.1| 315|Homo sapiens RP3-337H4.3 protein.
Length = 315
Score = 41.5 bits (93), Expect = 0.003
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = +2
Query: 503 VLQKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLI 658
+L+ YFDV+ ++V R++ S++P K+ F +KI G +LYGP+ + TL+
Sbjct: 82 ILRPYFDVEPAQVRSRLLESMIPIKMVN--FPQKIAG--ELYGPLMLVFTLV 129
>AK022757-1|BAB14231.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ12695 fis, clone NT2RP1000418. ).
Length = 350
Score = 41.5 bits (93), Expect = 0.003
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = +2
Query: 503 VLQKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLI 658
+L+ YFDV+ ++V R++ S++P K+ F +KI G +LYGP+ + TL+
Sbjct: 117 ILRPYFDVEPAQVRSRLLESMIPIKMVN--FPQKIAG--ELYGPLMLVFTLV 164
>AK021655-1|BAB13866.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ11593 fis, clone HEMBA1003803. ).
Length = 350
Score = 41.5 bits (93), Expect = 0.003
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = +2
Query: 503 VLQKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLI 658
+L+ YFDV+ ++V R++ S++P K+ F +KI G +LYGP+ + TL+
Sbjct: 117 ILRPYFDVEPAQVRSRLLESMIPIKMVN--FPQKIAG--ELYGPLMLVFTLV 164
>AK021433-1|BAB13824.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ11371 fis, clone HEMBA1000356, highly similar to
Homo sapiens mRNA; cDNA DKFZp566C243 (from clone
DKFZp566C243). ).
Length = 280
Score = 41.5 bits (93), Expect = 0.003
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = +2
Query: 503 VLQKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLI 658
+L+ YFDV+ ++V R++ S++P K+ F +KI G +LYGP+ + TL+
Sbjct: 117 ILRPYFDVEPAQVRSRLLESMIPIKMVN--FPQKIAG--ELYGPLMLVFTLV 164
>AB065543-1|BAC05788.1| 324|Homo sapiens seven transmembrane helix
receptor protein.
Length = 324
Score = 31.9 bits (69), Expect = 2.8
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = -1
Query: 516 YFCNT--LLSRSCDSTEVESLLLEQLRAFRQRSNFD*KYY-YYCIDLHVL 376
+FC+ LL+ SC T++ LLL L +F Q S F + Y+CI + VL
Sbjct: 177 FFCDIPPLLALSCTDTQINQLLLFALCSFIQTSTFVVIFISYFCILITVL 226
>AB065452-1|BAC05714.1| 324|Homo sapiens seven transmembrane helix
receptor protein.
Length = 324
Score = 31.9 bits (69), Expect = 2.8
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = -1
Query: 516 YFCNT--LLSRSCDSTEVESLLLEQLRAFRQRSNFD*KYY-YYCIDLHVL 376
+FC+ LL+ SC T++ LLL L +F Q S F + Y+CI + VL
Sbjct: 177 FFCDIPPLLALSCTDTQINQLLLFALCSFIQTSTFVVIFISYFCILITVL 226
>BC115737-1|AAI15738.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Frame = -1
Query: 534 LVCTSKYFCNTLLSRSCDSTEVESLLLEQLRAFRQRSNFD*KY-------YYYC 394
+ CT C L RS +S S+LLEQ+ +Q + D +Y YYYC
Sbjct: 702 MACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYC 755
>BC114964-1|AAI14965.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Frame = -1
Query: 534 LVCTSKYFCNTLLSRSCDSTEVESLLLEQLRAFRQRSNFD*KY-------YYYC 394
+ CT C L RS +S S+LLEQ+ +Q + D +Y YYYC
Sbjct: 702 MACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYC 755
>AY013249-1|AAG48509.1| 1272|Homo sapiens hUPF2 protein.
Length = 1272
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Frame = -1
Query: 534 LVCTSKYFCNTLLSRSCDSTEVESLLLEQLRAFRQRSNFD*KY-------YYYC 394
+ CT C L RS +S S+LLEQ+ +Q + D +Y YYYC
Sbjct: 702 MACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYC 755
>AL645617-1|CAI16755.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Frame = -1
Query: 534 LVCTSKYFCNTLLSRSCDSTEVESLLLEQLRAFRQRSNFD*KY-------YYYC 394
+ CT C L RS +S S+LLEQ+ +Q + D +Y YYYC
Sbjct: 702 MACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYC 755
>AL138898-4|CAH73458.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Frame = -1
Query: 534 LVCTSKYFCNTLLSRSCDSTEVESLLLEQLRAFRQRSNFD*KY-------YYYC 394
+ CT C L RS +S S+LLEQ+ +Q + D +Y YYYC
Sbjct: 702 MACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYC 755
>AF318574-1|AAG60689.1| 1272|Homo sapiens UPF2 protein.
Length = 1272
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Frame = -1
Query: 534 LVCTSKYFCNTLLSRSCDSTEVESLLLEQLRAFRQRSNFD*KY-------YYYC 394
+ CT C L RS +S S+LLEQ+ +Q + D +Y YYYC
Sbjct: 702 MACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYC 755
>AF301013-1|AAG33225.1| 1272|Homo sapiens regulator of nonsense
transcripts 2 protein.
Length = 1272
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Frame = -1
Query: 534 LVCTSKYFCNTLLSRSCDSTEVESLLLEQLRAFRQRSNFD*KY-------YYYC 394
+ CT C L RS +S S+LLEQ+ +Q + D +Y YYYC
Sbjct: 702 MACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYC 755
>AB037829-1|BAA92646.1| 1298|Homo sapiens KIAA1408 protein protein.
Length = 1298
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Frame = -1
Query: 534 LVCTSKYFCNTLLSRSCDSTEVESLLLEQLRAFRQRSNFD*KY-------YYYC 394
+ CT C L RS +S S+LLEQ+ +Q + D +Y YYYC
Sbjct: 728 MACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYC 781
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,971,105
Number of Sequences: 237096
Number of extensions: 2273067
Number of successful extensions: 4266
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4262
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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