Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30424
         (807 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125459-4|AAD12839.1|  287|Caenorhabditis elegans Hypothetical ...    81   1e-15
AF125459-3|AAX88817.1|  277|Caenorhabditis elegans Hypothetical ...    81   1e-15
AF125459-2|AAX88818.1|  414|Caenorhabditis elegans Hypothetical ...    81   1e-15
Z99277-2|CAB16487.1|  557|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr...    32   0.42 
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr...    32   0.42 
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr...    31   0.97 
Z31590-8|CAA83465.1|  812|Caenorhabditis elegans Hypothetical pr...    31   1.3  
AF518559-1|AAM97343.1|  793|Caenorhabditis elegans inositol poly...    31   1.3  
Z68214-4|CAA92447.1|  397|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical...    29   3.9  
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr...    28   9.0  
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr...    28   9.0  

>AF125459-4|AAD12839.1|  287|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7b protein.
          Length = 287

 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 33/84 (39%), Positives = 59/84 (70%)
 Frame = +2

Query: 509 QKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLIFTIAVSGNIA 688
           Q++FDV+T +V++R+++SV+P    RNY  + ++  PDL+GP W+S+TL+F I + GN+A
Sbjct: 80  QQFFDVETDQVIKRLLNSVIP--THRNYIQDFLQPIPDLWGPFWVSVTLVFAIGIFGNLA 137

Query: 689 SYLQNVNKAVHWRYDFHLVSYAAT 760
            +++N      +  DF +V+ A+T
Sbjct: 138 QFIENDGAKGTYGSDFRMVTSAST 161


>AF125459-3|AAX88817.1|  277|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7a protein.
          Length = 277

 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 33/84 (39%), Positives = 59/84 (70%)
 Frame = +2

Query: 509 QKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLIFTIAVSGNIA 688
           Q++FDV+T +V++R+++SV+P    RNY  + ++  PDL+GP W+S+TL+F I + GN+A
Sbjct: 70  QQFFDVETDQVIKRLLNSVIP--THRNYIQDFLQPIPDLWGPFWVSVTLVFAIGIFGNLA 127

Query: 689 SYLQNVNKAVHWRYDFHLVSYAAT 760
            +++N      +  DF +V+ A+T
Sbjct: 128 QFIENDGAKGTYGSDFRMVTSAST 151


>AF125459-2|AAX88818.1|  414|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7c protein.
          Length = 414

 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 33/84 (39%), Positives = 59/84 (70%)
 Frame = +2

Query: 509 QKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLIFTIAVSGNIA 688
           Q++FDV+T +V++R+++SV+P    RNY  + ++  PDL+GP W+S+TL+F I + GN+A
Sbjct: 70  QQFFDVETDQVIKRLLNSVIP--THRNYIQDFLQPIPDLWGPFWVSVTLVFAIGIFGNLA 127

Query: 689 SYLQNVNKAVHWRYDFHLVSYAAT 760
            +++N      +  DF +V+ A+T
Sbjct: 128 QFIENDGAKGTYGSDFRMVTSAST 151


>Z99277-2|CAB16487.1|  557|Caenorhabditis elegans Hypothetical
           protein Y53C12A.3 protein.
          Length = 557

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 21/52 (40%), Positives = 32/52 (61%)
 Frame = +2

Query: 503 VLQKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKPDLYGPIWISLTLI 658
           + + YFDV  +EV  R+I S +P+K S      +I+  PDLYGP  + LT++
Sbjct: 93  LFRPYFDVDPAEVRTRLIRSFIPRKPS------QIQVSPDLYGPTMLVLTMV 138


>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical protein
            T21E8.1b protein.
          Length = 1204

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 641  ISLTLIFTIAVSGNIASYLQNVNKAVHWR-YDFHLVSYAAT 760
            + +TL  T  ++G+ A+YL +  KAVH     FHL +Y AT
Sbjct: 900  VLMTLSMTANMAGSAAAYLPDYKKAVHAAGLIFHLFTYPAT 940


>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical protein
            T21E8.1a protein.
          Length = 1263

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 641  ISLTLIFTIAVSGNIASYLQNVNKAVHWR-YDFHLVSYAAT 760
            + +TL  T  ++G+ A+YL +  KAVH     FHL +Y AT
Sbjct: 959  VLMTLSMTANMAGSAAAYLPDYKKAVHAAGLIFHLFTYPAT 999


>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical protein
            T21E8.2 protein.
          Length = 1263

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 650  TLIFTIAVSGNIASYLQNVNKAVHWR-YDFHLVSYAAT 760
            TL  T  ++G+ A+YL +  KAVH     FHL +Y AT
Sbjct: 962  TLSMTANMAGSAAAYLPDYKKAVHAAGLIFHLFTYPAT 999


>Z31590-8|CAA83465.1|  812|Caenorhabditis elegans Hypothetical
           protein R01H10.7 protein.
          Length = 812

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = +2

Query: 446 SCSRSRDSTSVESQLLDNRVLQKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKP 619
           SC   +D T + S L   RVL++     T++V E ++SS+  + V R    + + GKP
Sbjct: 728 SCKSGKDRTGMASTLEQGRVLRETCGFNTAQVSE-VVSSLRKEGVRRENCRKNV-GKP 783


>AF518559-1|AAM97343.1|  793|Caenorhabditis elegans inositol
           polyphosphate-4-phosphataseprotein.
          Length = 793

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = +2

Query: 446 SCSRSRDSTSVESQLLDNRVLQKYFDVQTSEVVERIISSVLPQKVSRNYFDEKIKGKP 619
           SC   +D T + S L   RVL++     T++V E ++SS+  + V R    + + GKP
Sbjct: 709 SCKSGKDRTGMASTLEQGRVLRETCGFNTAQVSE-VVSSLRKEGVRRENCRKNV-GKP 764


>Z68214-4|CAA92447.1|  397|Caenorhabditis elegans Hypothetical
           protein C10C5.4 protein.
          Length = 397

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -3

Query: 382 CTASTSIRAVRSL-CSGE*SWKFNNSPVWTLDMMTGHLECFRKIFYEKNEIKQI 224
           C     + A R+L   G   WK     VW  D  TGH+    K F E NE K++
Sbjct: 111 CLGVQHVEAFRNLFAKGAKQWKRTIHVVWGPDEETGHINGM-KGFVETNEFKKL 163


>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.17 protein.
          Length = 1232

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = -3

Query: 325 WKFNNSPVWTLDMMTGHLECFRKIFYEKNE--IKQILEKFTVQYWLVKMLTSYIKFQ 161
           W++N +  W LD   GH      + +  N   I    E  +++ W ++  TS   F+
Sbjct: 234 WRYNETKAWELDSCRGHYNNVSSVIFHPNADLILSNSEDKSIRVWDMQKRTSLHVFR 290


>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical protein
            C05A9.1 protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 641  ISLTLIFTIAVSGNIASYLQNVNKAVHWR-YDFHLVSYAATA*Y 769
            + +TL  T + +G+  +YL +  KA+H     FHL +Y A   Y
Sbjct: 979  VLMTLSMTASYAGSAVAYLPDHRKAIHAAGLIFHLFTYPAIMPY 1022


>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical protein
            T21E8.3 protein.
          Length = 1243

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 647  LTLIFTIAVSGNIASYLQNVNKAVHWR-YDFHLVSYAAT 760
            +TL +T  ++G+  SY+ +  KA+H     F+L +Y AT
Sbjct: 947  ITLSYTSNMAGSAISYMPDFRKAIHSAGLIFNLFTYPAT 985


>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical protein
            T21E8.3 protein.
          Length = 1243

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 647  LTLIFTIAVSGNIASYLQNVNKAVHWR-YDFHLVSYAAT 760
            +TL +T  ++G+  SY+ +  KA+H     F+L +Y AT
Sbjct: 947  ITLSYTSNMAGSAISYMPDFRKAIHSAGLIFNLFTYPAT 985


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,105,451
Number of Sequences: 27780
Number of extensions: 377489
Number of successful extensions: 967
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)