Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30423
(837 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0198 - 2158139-2158334,2158517-2158641,2158736-2158789,215... 57 2e-08
03_02_0327 + 7481822-7481930,7482604-7482726,7482970-7483061,748... 56 3e-08
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 39 0.006
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 39 0.006
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 38 0.007
05_01_0037 - 256891-256998,257347-257502,257753-257824,258737-25... 38 0.010
03_06_0501 - 34380155-34380637,34380961-34381029,34382206-343822... 36 0.040
01_06_1343 - 36461476-36461961,36463355-36463519 36 0.040
01_01_0893 + 7043130-7043182,7043309-7043335,7043461-7043560,704... 36 0.040
05_01_0036 + 253734-253904,255216-255707 36 0.053
05_07_0127 - 27872803-27873238,27873842-27874059 35 0.070
09_06_0029 + 20336634-20336881,20337737-20338208 35 0.092
09_02_0222 + 5968232-5968467,5970811-5971187,5972216-5972256,597... 35 0.092
05_03_0286 - 11623575-11624063,11625098-11625262 34 0.12
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 34 0.12
01_06_0186 + 27294973-27295211,27295610-27296045 34 0.12
09_02_0464 - 9591139-9591571,9592601-9592818 34 0.16
10_06_0181 - 11532765-11533203,11536867-11537036 33 0.21
07_03_0473 - 18525712-18525858,18526049-18526162,18526442-185265... 33 0.21
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 33 0.28
06_03_0414 - 20548577-20549006,20553521-20553744 33 0.28
10_08_0165 + 15356748-15356811,15357113-15357186,15357311-153573... 32 0.49
06_03_1387 - 29820358-29821035 32 0.49
05_06_0082 - 25425050-25425479,25426551-25426783 32 0.49
04_04_0191 + 23468410-23468455,23468560-23468699,23469119-234692... 32 0.65
03_06_0637 - 35219212-35219754,35220405-35220587 32 0.65
07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703... 31 0.86
01_06_0712 + 31397167-31397402,31399823-31400252 31 0.86
12_02_1213 + 27058329-27058370,27058634-27058711,27058807-270589... 31 1.1
08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130... 31 1.1
02_04_0402 + 22618998-22619043,22619206-22619345,22620067-226201... 31 1.1
05_07_0205 - 28402436-28402505,28402604-28402681,28402789-284029... 31 1.5
02_01_0155 - 1080923-1081024,1081111-1081176,1081306-1081370,108... 31 1.5
01_05_0673 + 24183512-24183514,24183625-24183694,24184203-241842... 30 2.0
05_06_0080 + 25420371-25420423,25420681-25420780,25421742-254218... 29 3.5
03_05_0601 + 26039326-26039367,26039958-26040035,26040136-260403... 29 3.5
03_01_0365 - 2839190-2839251,2839637-2839694,2839946-2840032,284... 29 3.5
08_02_0076 + 11967606-11967905,11969125-11969223,11969813-119741... 29 4.6
03_06_0407 - 33714563-33714636,33714966-33715152,33715943-337160... 29 4.6
07_01_0926 - 7775536-7775616,7775695-7775787,7775903-7775965,777... 29 6.1
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 29 6.1
03_01_0647 + 4745788-4745907,4746510-4746591,4746847-4746958,474... 29 6.1
10_08_0179 + 15483854-15483968,15484196-15484302,15485211-154853... 28 8.0
10_06_0139 - 11139004-11139031,11139300-11141017,11141408-111414... 28 8.0
02_02_0028 + 6196453-6196512,6196936-6197320,6197843-6197925,619... 28 8.0
>10_01_0198 -
2158139-2158334,2158517-2158641,2158736-2158789,
2159038-2159342,2159677-2159860,2159908-2159999,
2161777-2161885
Length = 354
Score = 56.8 bits (131), Expect = 2e-08
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 22/100 (22%)
Frame = +2
Query: 35 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVK------LHKYKEGT----- 181
+V+V+V+GDSGVGK+SL HLI I P T+GC+V+VK +++ T
Sbjct: 27 QVRVLVVGDSGVGKSSLVHLILKGSAIARPPQTIGCAVDVKYIFIEVFPQFQHITYGSPG 86
Query: 182 -----------QAQNTFFVELWDVGGSNGHRNTRDGFTNQ 268
A+ FFVELWDV G ++ R F +Q
Sbjct: 87 SSSNSINSIKGDAERNFFVELWDVSGHERYKECRSLFYSQ 126
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGSTQIPILV 435
FY +G+I V+DL+ RK++ NL KW E+ + + L P G +P LV
Sbjct: 123 FYSQINGVIFVYDLSQRKTKTNLNKWAVEVAESGTFSAPLG--SGGP----GGLPVPYLV 176
Query: 436 IGTKYDAA 459
I K D A
Sbjct: 177 IANKVDIA 184
>03_02_0327 +
7481822-7481930,7482604-7482726,7482970-7483061,
7483144-7483285,7483625-7483929,7484120-7484173,
7484253-7484380,7484536-7484680,7484929-7484934
Length = 367
Score = 56.4 bits (130), Expect = 3e-08
Identities = 33/76 (43%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +2
Query: 65 GVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEG--------TQAQNTFFVELWDV 220
GVGK+SL HLI I P TVGC+V VK Y + Q FFVELWDV
Sbjct: 78 GVGKSSLVHLILKGSAIARPAQTVGCAVGVKHITYGSAGGSSNNIISDVQRNFFVELWDV 137
Query: 221 GGSNGHRNTRDGFTNQ 268
G +R R F Q
Sbjct: 138 SGHERYRTCRSIFYTQ 153
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGSTQIPILV 435
FY +G+I V+DL+ RK++ NL KW E+ + + L P G +P LV
Sbjct: 150 FYTQINGVIFVYDLSQRKTKTNLNKWAVEVAETGTFSAPLG--SGGP----GGLPVPYLV 203
Query: 436 IGTKYD 453
I K D
Sbjct: 204 IANKVD 209
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ HGII+V+D+T+++S N+++WL EI S N
Sbjct: 93 YYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDN 129
Score = 31.9 bits (69), Expect = 0.65
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K++++GDSGVGK+ L A + + S T+G V+ K+ + Q T +++WD
Sbjct: 26 KLLLIGDSGVGKSCLLLRFADDSYLDSYISTIG--VDFKIRTVE---QDGKTIKLQIWDT 80
Query: 221 GGSNGHRNTRDGF 259
G R +
Sbjct: 81 AGQERFRTITSSY 93
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ HGII+V+D+T+++S N+++WL EI S N
Sbjct: 77 YYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDN 113
Score = 31.9 bits (69), Expect = 0.65
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K++++GDSGVGK+ L A + + S T+G V+ K+ + Q T +++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYISTIG--VDFKIRTVE---QDGKTIKLQIWDT 64
Query: 221 GGSNGHRNTRDGF 259
G R +
Sbjct: 65 AGQERFRTITSSY 77
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ HGII+V+D+T+++S N+++WL EI S N
Sbjct: 77 YYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASEN 113
Score = 32.3 bits (70), Expect = 0.49
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K++++GDSGVGK+ L A + + S T+G V+ K+ + Q T +++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYISTIG--VDFKIRTVE---QDGKTIKLQIWDT 64
Query: 221 GGSNGHRNTRDGF 259
G R +
Sbjct: 65 AGQERFRTITSSY 77
>05_01_0037 -
256891-256998,257347-257502,257753-257824,258737-258784,
259071-259143,259237-259250
Length = 156
Score = 37.9 bits (84), Expect = 0.010
Identities = 14/30 (46%), Positives = 25/30 (83%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ HGII+V+D+T+ +S N+++WL+EI
Sbjct: 61 YYRGAHGIIIVYDVTDMESFNNVKQWLSEI 90
>03_06_0501 -
34380155-34380637,34380961-34381029,34382206-34382229,
34382622-34382786
Length = 246
Score = 35.9 bits (79), Expect = 0.040
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHV 384
+Y+ G +LV+D+T +++ N+Q+WL E+ + SN + V
Sbjct: 112 YYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMV 154
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVG---CSVEVKLHKYK 172
K+V++GDSGVGK+++ N+ L T+G + +++H+Y+
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIHRYR 60
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 35.9 bits (79), Expect = 0.040
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K+V++GDSGVGK+++ N+ L T+G + + EG T ++WD
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQI-EG----KTIKAQIWDT 68
Query: 221 GGSNGHR 241
G +R
Sbjct: 69 AGQERYR 75
Score = 33.5 bits (73), Expect = 0.21
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ G +LV D+T R++ N+Q+WL E+ + +N
Sbjct: 81 YYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADAN 117
>01_01_0893 +
7043130-7043182,7043309-7043335,7043461-7043560,
7045110-7045256,7045342-7045422,7045509-7045654,
7046030-7046099
Length = 207
Score = 35.9 bits (79), Expect = 0.040
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +2
Query: 38 VKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWD 217
+KV++LGDSGVGKTSL + + K T+G KE F +++WD
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLT-----KEVQIDDRLFTLQIWD 63
Query: 218 VGG 226
G
Sbjct: 64 TAG 66
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGSTQIPILV 435
FY+ +LV+D+ KS L W E L Q S + DPE F P +V
Sbjct: 77 FYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPS--------DPENF------PFVV 122
Query: 436 IGTKYD 453
+G K D
Sbjct: 123 LGNKID 128
>05_01_0036 + 253734-253904,255216-255707
Length = 220
Score = 35.5 bits (78), Expect = 0.053
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVK-LHKYKEGTQAQNTFFVELWD 217
KVV++GDSGVGK++L N+ L T+G + LH + +AQ +WD
Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQ------IWD 69
Query: 218 VGGSNGHR 241
G +R
Sbjct: 70 TAGQERYR 77
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 35.1 bits (77), Expect = 0.070
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVK-LHKYKEGTQAQNTFFVELWD 217
KVV++GDSGVGK++L N+ L T+G + +H + +AQ +WD
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQ------IWD 67
Query: 218 VGGSNGHR 241
G +R
Sbjct: 68 TAGQERYR 75
Score = 28.7 bits (61), Expect = 6.1
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ G ++V+D+T + N+++W+ E+ + +N
Sbjct: 81 YYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDAN 117
>09_06_0029 + 20336634-20336881,20337737-20338208
Length = 239
Score = 34.7 bits (76), Expect = 0.092
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVK-LHKYKEGTQAQNTFFVELWD 217
KVVV+GDS VGKT L ++ L T+G + + L +++ +AQ +WD
Sbjct: 24 KVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQ------IWD 77
Query: 218 VGGSNGHR 241
G +R
Sbjct: 78 TAGQERYR 85
Score = 28.7 bits (61), Expect = 6.1
Identities = 9/30 (30%), Positives = 21/30 (70%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ G ++V+D+T R++ N+ +W+ E+
Sbjct: 91 YYRGALGAMVVYDITRRRTFENVARWVEEL 120
>09_02_0222 +
5968232-5968467,5970811-5971187,5972216-5972256,
5972808-5972843
Length = 229
Score = 34.7 bits (76), Expect = 0.092
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVK-LHKYKEGTQAQNTFFVELWD 217
KVV++GDS VGK+ L A N+ L T+G + + LH +AQ +WD
Sbjct: 20 KVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQ------IWD 73
Query: 218 VGGSNGHR 241
G +R
Sbjct: 74 TAGQERYR 81
Score = 33.1 bits (72), Expect = 0.28
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGSTQIPILV 435
+Y+ G +LV+D+T R+S ++ +WL E+ N + + + LG+ + V
Sbjct: 87 YYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSD--LGT----LRV 140
Query: 436 IGTKYDAAEEKQRKNQY----RRLASSIVNNAVLT 528
+ T+ DA E +R+N + L S+ V NA +T
Sbjct: 141 VPTE-DAKEFAERENLFFMETSALESTNVENAFMT 174
>05_03_0286 - 11623575-11624063,11625098-11625262
Length = 217
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K+V++GDSGVGK+++ N L T+G K EG T ++WD
Sbjct: 14 KMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATK-SLQMEG----KTIKAQIWDT 68
Query: 221 GGSNGHR 241
G +R
Sbjct: 69 AGQERYR 75
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHV 384
+Y+ G +LV+D+T R+S N+ +WL E+ + S+ + V
Sbjct: 81 YYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMV 123
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNL-QKWLAEI 345
+Y+ HGIILV+D+T R+S NL W EI
Sbjct: 82 YYRGAHGIILVYDVTKRESFTNLADVWAKEI 112
>01_06_0186 + 27294973-27295211,27295610-27296045
Length = 224
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
KVV++GDSGVGK++L A ++ L T+G K + + ++WD
Sbjct: 21 KVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDD-----RLVKAQIWDT 75
Query: 221 GGSNGHR 241
G +R
Sbjct: 76 AGQERYR 82
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ G ++V+D+T R + N ++WL E+ + +N
Sbjct: 88 YYRGAVGALVVYDVTRRITFENAERWLKELRDHTDAN 124
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 33.9 bits (74), Expect = 0.16
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
KVV++GDSGVGK++L N+ L T+G VE + + ++WD
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIG--VEFATRSIRVDDKVVK---AQIWDT 68
Query: 221 GGSNGHR 241
G +R
Sbjct: 69 AGQERYR 75
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ G ++V+D+T + N+++WL E+ + +N
Sbjct: 81 YYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDAN 117
>10_06_0181 - 11532765-11533203,11536867-11537036
Length = 202
Score = 33.5 bits (73), Expect = 0.21
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Frame = +2
Query: 20 MAAIEKV----KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKL----HKYKE 175
MA EKV KVV++GDS VGK+ + A N+ + T+G + + HKY+
Sbjct: 1 MAGGEKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKYRA 60
Query: 176 GTQA 187
T A
Sbjct: 61 VTSA 64
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ G +LV+D+T R+S ++ +WL E+ N
Sbjct: 65 YYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKN 101
>07_03_0473 -
18525712-18525858,18526049-18526162,18526442-18526522,
18526787-18526865,18526902-18526996,18527092-18527170,
18527339-18527450,18527682-18527770,18527868-18527938,
18528846-18528962
Length = 327
Score = 33.5 bits (73), Expect = 0.21
Identities = 24/75 (32%), Positives = 36/75 (48%)
Frame = +2
Query: 20 MAAIEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 199
++A+ K K+V LGD VGKTS+ ++K + T+G K Y E T
Sbjct: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKT-MYLE----DRTV 58
Query: 200 FVELWDVGGSNGHRN 244
++LWD G R+
Sbjct: 59 RLQLWDTAGQERFRS 73
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNL-QKWLAEILNQDSSNPTLQ 378
+Y+ GIILV+D+T R+S NL + W EI + S+ ++
Sbjct: 92 YYRGAQGIILVYDVTKRESFTNLAEVWSKEIESHSSNKDCIK 133
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
KVV++GDSGVGK++L N+ L T+G + + +G + ++WD
Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQV-DGKVVK----AQIWDT 70
Query: 221 GGSNGHR 241
G +R
Sbjct: 71 AGQERYR 77
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTL 375
+Y+ G +LV+D+T + N+++WL E+ +D ++P +
Sbjct: 83 YYRGAVGALLVYDVTRHSTFENVERWLKEL--RDHTDPNI 120
>10_08_0165 +
15356748-15356811,15357113-15357186,15357311-15357394,
15357508-15357602,15357737-15357790,15357791-15357896,
15358236-15358277,15358585-15358674,15358788-15358984,
15359355-15359413,15360166-15362252
Length = 983
Score = 32.3 bits (70), Expect = 0.49
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +2
Query: 35 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 214
+VK+V+LGDSGVGK+ + + + TVG S + ++ T T E+W
Sbjct: 44 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDST----TVKFEIW 99
Query: 215 DVGG 226
D G
Sbjct: 100 DTAG 103
>06_03_1387 - 29820358-29821035
Length = 225
Score = 32.3 bits (70), Expect = 0.49
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
KVVV+GDS VGKT L ++ + T+G +E + + G + ++WD
Sbjct: 9 KVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIG--IEFQTRTVEIGGKRVK---AQIWDT 63
Query: 221 GGSNGHR 241
G +R
Sbjct: 64 AGQERYR 70
>05_06_0082 - 25425050-25425479,25426551-25426783
Length = 220
Score = 32.3 bits (70), Expect = 0.49
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
KVV++GDSGVGK++L N+ L T+G + + +G ++WD
Sbjct: 19 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQV-DG----KVIKAQIWDT 73
Query: 221 GGSNGHR 241
G +R
Sbjct: 74 AGQERYR 80
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/40 (32%), Positives = 27/40 (67%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTL 375
+Y+ G +LV+D+T R + N+ +WL E+ +D ++P++
Sbjct: 86 YYRGAVGALLVYDVTRRATFDNVGRWLREL--RDHTDPSI 123
>04_04_0191 +
23468410-23468455,23468560-23468699,23469119-23469201,
23469346-23469550,23469632-23469735,23470290-23470449
Length = 245
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 250 RWFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHV 384
R +Y+ G +LV+D+T R++ +L WL + ++N T+ V
Sbjct: 73 RSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLV 117
>03_06_0637 - 35219212-35219754,35220405-35220587
Length = 241
Score = 31.9 bits (69), Expect = 0.65
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKY 169
K+V++GDSGVGK++L N L T+G + +Y
Sbjct: 20 KIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQY 62
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ G +LV+D+T + N+++WL E+ + SN
Sbjct: 105 YYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSN 141
>07_03_1397 +
26269186-26269525,26269727-26269932,26270225-26270327,
26270570-26270577
Length = 218
Score = 31.5 bits (68), Expect = 0.86
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYK-EGTQAQNTFFVELWD 217
K+V+LGDS VGK++L A N+ + T+G VE + K +G + + ++WD
Sbjct: 16 KIVLLGDSSVGKSNLLARFARNEFYPNSKSTIG--VEFQTQKLVIDGKEIK----AQIWD 69
Query: 218 VGGSNGHR 241
G R
Sbjct: 70 TAGQERFR 77
>01_06_0712 + 31397167-31397402,31399823-31400252
Length = 221
Score = 31.5 bits (68), Expect = 0.86
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K V++GDSGVGK++L N+ L T+G + + +G + ++WD
Sbjct: 20 KTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQV-DGKVVK----AQIWDT 74
Query: 221 GGSNGHR 241
G +R
Sbjct: 75 AGQERYR 81
Score = 31.5 bits (68), Expect = 0.86
Identities = 13/40 (32%), Positives = 27/40 (67%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTL 375
+Y+ G +LV+D+T R + N+ +WL E+ +D ++P++
Sbjct: 87 YYRGAVGALLVYDVTRRATFDNVARWLKEL--RDHTDPSI 124
>12_02_1213 +
27058329-27058370,27058634-27058711,27058807-27058974,
27059834-27059882,27060084-27060157,27060692-27060785,
27060924-27061003,27061311-27061322
Length = 198
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGSTQIP 426
+Y+ I+V+D+TN S +KW+ E+ Q + N T+ + + + + Q+P
Sbjct: 80 YYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPN-TIMALAGNKADMVEARQVP 135
>08_02_1318 -
26111031-26111276,26112139-26112427,26112936-26113036,
26113628-26113878,26114842-26114865,26115793-26116129
Length = 415
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
KVV++GDS VGK++L A N+ L T+G + + G + ++WD
Sbjct: 15 KVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDI-NGKDVK----AQIWDT 69
Query: 221 GGSNGHR 241
G R
Sbjct: 70 AGQERFR 76
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ G +LV+D++ R + N+ +WL E+
Sbjct: 82 YYRGAFGALLVYDISRRSTFDNVGRWLQEL 111
>02_04_0402 +
22618998-22619043,22619206-22619345,22620067-22620149,
22620234-22620438,22620524-22620592,22621099-22621188
Length = 210
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 250 RWFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTL 375
R +Y+ G +LV+D+T R++ +L WL + ++N T+
Sbjct: 73 RSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTV 114
>05_07_0205 -
28402436-28402505,28402604-28402681,28402789-28402968,
28403051-28403140,28403258-28403375,28403461-28403517,
28404155-28404224,28404317-28404319
Length = 221
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLT--HLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 214
K+V++GD G GKT+ HL + P T+G V++H T F W
Sbjct: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEP--TIG----VEVHPLDFTTNCGKIRFY-CW 67
Query: 215 DVGGSNGHRNTRDGF 259
D G RDG+
Sbjct: 68 DTAGQEKFGGLRDGY 82
>02_01_0155 -
1080923-1081024,1081111-1081176,1081306-1081370,
1081938-1082001,1082359-1082507,1082591-1082678,
1083757-1083855
Length = 210
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +1
Query: 259 YQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGSTQIPILVI 438
Y+ +L L ++ S N+ K +DS + ++ ++D PE + +PI+++
Sbjct: 75 YRGADVFLLAFSLISKASYENVSKKA-----RDSLSFSVNNIDWIPELKHYAPGVPIILV 129
Query: 439 GTKYDAAEEKQ 471
GTK D ++KQ
Sbjct: 130 GTKLDLRDDKQ 140
>01_05_0673 +
24183512-24183514,24183625-24183694,24184203-24184259,
24184348-24184465,24185044-24185133,24185209-24185388,
24185474-24185551,24185642-24185711
Length = 221
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLT--HLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 214
K+V++GD G GKT+ HL + P T+G V++H T F W
Sbjct: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEP--TIG----VEVHPLDFFTNCGKIRFY-CW 67
Query: 215 DVGGSNGHRNTRDGF 259
D G RDG+
Sbjct: 68 DTAGQEKFGGLRDGY 82
>05_06_0080 +
25420371-25420423,25420681-25420780,25421742-25421888,
25421959-25422039,25422147-25422296
Length = 176
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGSTQIPILV 435
FY+ +LV+D+ + KS NL W E L Q S + DP+ F P ++
Sbjct: 68 FYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPS--------DPDNF------PFVL 113
Query: 436 IGTKYD 453
+G K D
Sbjct: 114 LGNKVD 119
>03_05_0601 +
26039326-26039367,26039958-26040035,26040136-26040303,
26040994-26041042,26041502-26041575,26041940-26041948
Length = 139
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ I+V+D+TN S +KW+ E+ Q +S+
Sbjct: 80 YYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNSS 116
>03_01_0365 -
2839190-2839251,2839637-2839694,2839946-2840032,
2840117-2840206,2840575-2840650,2840877-2840971,
2841090-2841173,2841270-2841343,2841803-2841827
Length = 216
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +2
Query: 35 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 214
+ K+V+LGDSGVGK+ + + + TVG S + ++ T + E+W
Sbjct: 31 RAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVK----FEIW 86
Query: 215 DVGG 226
D G
Sbjct: 87 DTAG 90
>08_02_0076 +
11967606-11967905,11969125-11969223,11969813-11974124,
11974177-11974211
Length = 1581
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 44 VVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLH 163
+ ++GD G+GKT+L L+ +N + S + V V V +H
Sbjct: 285 LAIIGDGGIGKTTLAKLVFNNSTV-SKHFDVLLWVYVSVH 323
>03_06_0407 -
33714563-33714636,33714966-33715152,33715943-33716093,
33716520-33716632,33717022-33717085,33717180-33717391,
33717540-33717621,33717811-33717866,33718004-33718072,
33718524-33718772,33718873-33719049,33719556-33719702,
33719794-33719926,33720093-33720307
Length = 642
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 20 MAAIEKVKVVVLGDSGVGKTSLTHLIA 100
+A + V+VVV+GD G GK+SL +A
Sbjct: 10 LAGKQGVRVVVIGDPGTGKSSLVVSVA 36
>07_01_0926 -
7775536-7775616,7775695-7775787,7775903-7775965,
7776326-7776423,7776661-7776761,7776865-7776937,
7778575-7778647
Length = 193
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = +2
Query: 38 VKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWD 217
+K++++GDSGVGK+ L + S T+G +++ + +G + + +++WD
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEL-DGKRIK----LQIWD 70
Query: 218 VGGSNGHRNTRDGFTN 265
G R N
Sbjct: 71 TAGQERFRTITTDIRN 86
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = +2
Query: 38 VKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWD 217
+K++++GDSGVGK+ L + S T+G +++ + +G + + +++WD
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVEL-DGKRIK----LQIWD 70
Query: 218 VGGSNGHRNTRDGFTN 265
G R N
Sbjct: 71 TAGQERFRTITTDIRN 86
>03_01_0647 +
4745788-4745907,4746510-4746591,4746847-4746958,
4747607-4747697,4747805-4747969
Length = 189
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 20 MAAIEKVKVVVLGDSGVGKTSLTHLIAHNK 109
++A+ K K+V LGD VGKT++ ++K
Sbjct: 5 VSALAKYKLVFLGDQAVGKTAIITRFMYDK 34
>10_08_0179 +
15483854-15483968,15484196-15484302,15485211-15485304,
15485537-15485637,15486143-15486199,15486614-15486761,
15486982-15487049
Length = 229
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 259 YQPTHGIILVHDLTNRKSQVNLQKWLAEILNQD 357
+QP H + H L + + +L KWLA+ + +D
Sbjct: 79 FQPAHEDDIHHLLQGPQDEADLDKWLADFIPKD 111
>10_06_0139 -
11139004-11139031,11139300-11141017,11141408-11141477,
11142520-11143361
Length = 885
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/23 (56%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +2
Query: 32 EKVKVV-VLGDSGVGKTSLTHLI 97
+K+KVV V+G SG+GKT+L L+
Sbjct: 200 QKLKVVSVVGSSGIGKTTLAKLL 222
>02_02_0028 +
6196453-6196512,6196936-6197320,6197843-6197925,
6198060-6198183,6198404-6198523,6198595-6198755,
6198999-6199157,6199272-6199434,6199604-6199729,
6199775-6199900,6200400-6200764,6201204-6201404,
6201685-6201794,6201919-6202003,6202553-6202681,
6202763-6202868,6202984-6203072,6203172-6203474
Length = 964
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 50 VLGDSGVGKTSLTHLI-AHNKPILSPGWTVGCSVEVKLHKYKEG 178
VLG +G GKT+L +++ KP + G ++ +++K G
Sbjct: 677 VLGPNGAGKTTLINMLTGFTKPTSGTAYIEGMDIQFEMNKIYAG 720
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,603,316
Number of Sequences: 37544
Number of extensions: 474913
Number of successful extensions: 1323
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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