Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30423
(837 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 2e-26
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 41 0.001
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 41 0.001
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 39 0.004
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.013
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 37 0.018
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.071
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 35 0.071
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 35 0.071
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 34 0.16
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 34 0.16
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_25441| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_52023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 33 0.38
SB_55465| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_49459| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_30948| Best HMM Match : NACHT (HMM E-Value=0.0023) 33 0.38
SB_15636| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_3097| Best HMM Match : NACHT (HMM E-Value=2e-10) 33 0.38
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 32 0.50
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 32 0.66
SB_56690| Best HMM Match : NACHT (HMM E-Value=0.015) 31 0.88
SB_52389| Best HMM Match : NACHT (HMM E-Value=2.1e-09) 31 0.88
SB_46341| Best HMM Match : UPF0079 (HMM E-Value=0.18) 31 0.88
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_37187| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_27098| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_4410| Best HMM Match : NACHT (HMM E-Value=0.014) 31 0.88
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 31 1.2
SB_17545| Best HMM Match : NACHT (HMM E-Value=6.7e-10) 31 1.2
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 31 1.5
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 31 1.5
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 31 1.5
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 31 1.5
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 31 1.5
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 31 1.5
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 30 2.0
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 30 2.0
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_48143| Best HMM Match : Sialidase (HMM E-Value=0.33) 30 2.7
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 29 3.5
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 29 3.5
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 29 3.5
SB_55554| Best HMM Match : AAA (HMM E-Value=0.022) 29 3.5
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 29 3.5
SB_6416| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10) 29 3.5
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08) 29 4.7
SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 29 4.7
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 29 4.7
SB_10432| Best HMM Match : OmpH (HMM E-Value=5.2) 29 6.2
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 29 6.2
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 29 6.2
SB_57152| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.1e-25) 28 8.2
SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 28 8.2
SB_16779| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 28 8.2
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 116 bits (279), Expect = 2e-26
Identities = 50/82 (60%), Positives = 61/82 (74%)
Frame = +2
Query: 20 MAAIEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 199
MAA+EKV++ V+GDSGVGKTSL HLI H + I S WT+GC+VEVKL+ YKEG TF
Sbjct: 1 MAAVEKVRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTF 60
Query: 200 FVELWDVGGSNGHRNTRDGFTN 265
F+E WD+GGS H N+R F N
Sbjct: 61 FLEFWDIGGSANHENSRSIFYN 82
Score = 67.3 bits (157), Expect = 1e-11
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 14/82 (17%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILN--QDSSNPTLQHVD------------VD 393
FY +G+ILVHDLTNRKS NL+KWLAE+LN +D + D D
Sbjct: 80 FYNGINGLILVHDLTNRKSFTNLRKWLAEVLNASKDLYGANNKQKDSWFGFTTDIIEEYD 139
Query: 394 PEQFLGSTQIPILVIGTKYDAA 459
PEQF G+ QIP++V+GTK D A
Sbjct: 140 PEQFAGN-QIPVIVVGTKLDQA 160
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +3
Query: 504 YSEQCGADEIFVTCHQARSLAPGSTNSVKLTRFFDKVIERRYYSRVS 644
+ E+ GAD I + C + L PG+ NS KL FFDKVIERR++S +S
Sbjct: 174 FVEEIGADVISIDCMNVKQLRPGTANSKKLINFFDKVIERRFHSSMS 220
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 40.7 bits (91), Expect = 0.001
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ HG+++V+D+T R+S NL KWL E+
Sbjct: 388 YYRGAHGVMIVYDITKRESYNNLHKWLMEV 417
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/64 (28%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI-LNQDSSNPTL--QHVDVDPEQFLGSTQIP 426
F++ G +LV DLT+ +S VN++ WL+++ + NP + ++D+D ++ + P
Sbjct: 186 FFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTHAYCENPDIGSPYIDIDVNEYRNGSVEP 245
Query: 427 ILVI 438
+L++
Sbjct: 246 LLLV 249
Score = 35.5 bits (78), Expect = 0.054
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Frame = +2
Query: 38 VKVVVLGDSGVGKTSLTHLI--AHNKPILSPGWTVGCSVEVK------LHKYKEGTQAQN 193
+K + LGDSGVGKTSL + +H P P T+G K L+ E +
Sbjct: 107 IKFLALGDSGVGKTSLLYQYTDSHFNPRFVP--TIGIDFREKRVVHHPLNPDGERSTRGQ 164
Query: 194 TFFVELWDVGGSNGHRNTRDGFTNQRM 274
++LWD G R+ F M
Sbjct: 165 RIHLQLWDTAGQERFRSLTTAFFRDAM 191
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
KVV +GDSGVGK+S H H++ P +T V+ ++ Q ++LWD
Sbjct: 898 KVVFIGDSGVGKSSFLHRFCHDQ--WKPSFTATIGVDFQIKTMNVNGQC---IAIQLWDT 952
Query: 221 GGSNGHRN 244
G R+
Sbjct: 953 AGQERFRS 960
Score = 29.5 bits (63), Expect = 3.5
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+++ GI++ +D+T S NL+KW+ +
Sbjct: 965 YFRKADGILIFYDVTAESSFTNLKKWMVSV 994
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 39.1 bits (87), Expect = 0.004
Identities = 14/30 (46%), Positives = 25/30 (83%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ THG+I+V+D+T+ + VN+++WL EI
Sbjct: 46 YYRGTHGVIVVYDVTSADTFVNVKRWLHEI 75
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 37.5 bits (83), Expect = 0.013
Identities = 14/30 (46%), Positives = 25/30 (83%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ HGII+V+D+T+++S N+++WL EI
Sbjct: 98 YYRGAHGIIVVYDVTDQESFNNVKQWLQEI 127
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 37.1 bits (82), Expect = 0.018
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ GI+LV+D+TN KS N+ KWL +I
Sbjct: 25 YYRGAMGIMLVYDVTNEKSFSNISKWLKKI 54
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 35.1 bits (77), Expect = 0.071
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPT 372
FY+ T G +LV+D+T+R+S L WL EI +D +P+
Sbjct: 10 FYKDTQGALLVYDVTSRESFEALDIWLDEI-KKDIGSPS 47
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 35.1 bits (77), Expect = 0.071
Identities = 26/77 (33%), Positives = 41/77 (53%)
Frame = +2
Query: 20 MAAIEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 199
MA+ K+KVV+ GD+ VGKTS + N+ +P T + E+ L + G+Q F
Sbjct: 1 MASERKLKVVLTGDNNVGKTSFLINLTQNELEGTP--TAFANYELGL---EVGSQ---KF 52
Query: 200 FVELWDVGGSNGHRNTR 250
++LWD G+ + R
Sbjct: 53 LLDLWDTEGTTEYDRLR 69
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 35.1 bits (77), Expect = 0.071
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPT 372
FY+ T G +LV+D+T+R+S L WL EI +D +P+
Sbjct: 5 FYKDTQGALLVYDVTSRESFEALDIWLDEI-KKDIGSPS 42
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/40 (32%), Positives = 29/40 (72%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTL 375
+Y+ G +LV+DLT +K+ ++++WL E+ ++ ++PT+
Sbjct: 81 YYRGAVGAVLVYDLTKQKTFQDVERWLLEV--REHADPTI 118
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K+V++GDSGVGK+SL N+ + T+G + + EG ++WD
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQV-EG----KIIKAQVWDT 68
Query: 221 GGSNGHR 241
G +R
Sbjct: 69 AGQERYR 75
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 33.9 bits (74), Expect = 0.16
Identities = 10/30 (33%), Positives = 22/30 (73%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ HGI+L++D+ ++ ++L +WL E+
Sbjct: 77 YYRSAHGIVLIYDVNESETFLHLSQWLEEV 106
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K++++GDSGVGK+SL L+ S + V+ K+ T T +++WD
Sbjct: 10 KLLLIGDSGVGKSSL--LLRFADDTFSNTYISTIGVDFKIRTL---TVDGKTIKLQIWDT 64
Query: 221 GGSNGHR 241
G R
Sbjct: 65 AGQERFR 71
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 33.5 bits (73), Expect = 0.22
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +2
Query: 38 VKVVVLGDSGVGKTSLTHLIAHNKPILSP--GWTVGCSVEVKLHKYKEGTQAQNTFFVEL 211
+K++++G+SGVGK+SL L+ P G T+G +VK EG +A+ + +
Sbjct: 9 LKILIVGESGVGKSSL--LLRFTDDTFDPDIGATIGVDFKVKTLTV-EGNKAK----LAI 61
Query: 212 WDVGGSNGHR 241
WD G R
Sbjct: 62 WDTAGQERFR 71
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ G+ILV+D +R++ L++WL E+
Sbjct: 77 YYRGAQGVILVYDTNSRETFDKLEEWLNEV 106
>SB_25441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +1
Query: 283 LVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGSTQIPILVIGTKYDAAE 462
L++D+ +K +K +AE +S TLQ +DP++ L T +P++ TK + A+
Sbjct: 319 LLNDIIIKKKYKTKEKKIAECTQTNSPANTLQLRTLDPDELLFQTLLPVI---TKRNTAD 375
Query: 463 EKQ 471
+++
Sbjct: 376 DEE 378
>SB_52023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +1
Query: 283 LVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGSTQIPILVIGTKYDAAE 462
L++D+ +K +K +AE +S TLQ +DP++ L T +P++ TK + A+
Sbjct: 44 LLNDIIIKKKYKTKEKKIAECTQTNSPANTLQLRTLDPDELLFQTLLPVI---TKRNTAD 100
Query: 463 EKQ 471
+++
Sbjct: 101 DEE 103
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 33.1 bits (72), Expect = 0.29
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 199
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG Q F
Sbjct: 759 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNQGGGVF 816
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 32.7 bits (71), Expect = 0.38
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGW--TVG---CSVEVKLHKYKEGTQAQNTFFV 205
KVV+LG++GVGKTSL + + N +PG T+G CS VK+ + + +T V
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENH--FTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGV 70
Query: 206 ELWDVGGSNGHR 241
E + N +R
Sbjct: 71 ERFRTVTKNYYR 82
>SB_55465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 32.7 bits (71), Expect = 0.38
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 199
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG Q F
Sbjct: 69 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNQGGGIF 126
>SB_49459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 32.7 bits (71), Expect = 0.38
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 199
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG Q F
Sbjct: 52 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNQGGGIF 109
>SB_30948| Best HMM Match : NACHT (HMM E-Value=0.0023)
Length = 180
Score = 32.7 bits (71), Expect = 0.38
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +2
Query: 32 EKVKVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNT 196
E KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG +
Sbjct: 66 EACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGVGI 125
Query: 197 F 199
F
Sbjct: 126 F 126
>SB_15636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1311
Score = 32.7 bits (71), Expect = 0.38
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 199
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG Q F
Sbjct: 308 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNQGGGIF 365
>SB_3097| Best HMM Match : NACHT (HMM E-Value=2e-10)
Length = 295
Score = 32.7 bits (71), Expect = 0.38
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +2
Query: 32 EKVKVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNT 196
E KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG +
Sbjct: 49 EACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGGGI 108
Query: 197 F 199
F
Sbjct: 109 F 109
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 32.7 bits (71), Expect = 0.38
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +2
Query: 32 EKVKVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNT 196
E KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG +
Sbjct: 615 EACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGGGI 674
Query: 197 F 199
F
Sbjct: 675 F 675
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 274 GIILVHDLTNRKSQVNLQKWLAEI 345
GI+LV+D+T RKS NLQ WL I
Sbjct: 58 GILLVYDITCRKSFDNLQFWLESI 81
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
+++++GDS VGK+SL + + TVG V++ + K + + +++WD
Sbjct: 15 RIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIK----LQIWDT 70
Query: 221 GGSNGHRN 244
G R+
Sbjct: 71 AGQERFRS 78
>SB_56690| Best HMM Match : NACHT (HMM E-Value=0.015)
Length = 180
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 199
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG + F
Sbjct: 69 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGGGIF 126
>SB_52389| Best HMM Match : NACHT (HMM E-Value=2.1e-09)
Length = 818
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 199
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG + F
Sbjct: 246 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGGGIF 303
>SB_46341| Best HMM Match : UPF0079 (HMM E-Value=0.18)
Length = 156
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 199
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG + F
Sbjct: 69 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGGGIF 126
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWL 336
+Y G+I+ +D+TN+KS +L +WL
Sbjct: 76 YYHNADGVIVTYDITNKKSFESLPQWL 102
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K++++GD+ VGKT L + G T+G +K +G + + +++WD
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDV-DGEKVK----LQIWDT 63
Query: 221 GGSNGHRNTRDGF 259
G R+ +
Sbjct: 64 AGQERFRSITQSY 76
>SB_37187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 199
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG + F
Sbjct: 69 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGGGIF 126
>SB_27098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 199
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG + F
Sbjct: 33 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGGGIF 90
>SB_4410| Best HMM Match : NACHT (HMM E-Value=0.014)
Length = 127
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 199
KV++ GDSG GKT+LT +A + K +LS T V + +K + KEG + F
Sbjct: 16 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGGGIF 73
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVG 139
KVV++GDSGVGK++L N+ L T+G
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIG 45
>SB_17545| Best HMM Match : NACHT (HMM E-Value=6.7e-10)
Length = 321
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNTF 199
KV + GDSG GKT+LT +A + K +LS T V + +K + KEG Q F
Sbjct: 52 KVHLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNQGGGIF 109
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ G +LV+D+ S +NL KW+ E L Q +S+
Sbjct: 12 YYRGAMGAVLVYDIAKGTSFMNLNKWVEE-LRQHASD 47
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ G +LV+D+ + N+++WL E+ + SN
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN 38
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 32 EKVKVVVLGDSGVGKTSLTH 91
+++K+V+LG+SG GKTS H
Sbjct: 259 KRIKLVLLGESGAGKTSCAH 278
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K+V+ GD+ VGK+S + N+ + T+G ++K +G T+ ++LWD
Sbjct: 444 KIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKT-LVVDG----KTYALQLWDT 498
Query: 221 GGSNGHRN 244
G R+
Sbjct: 499 AGQERFRS 506
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 259 YQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
Y+ GI+LV+D+TN KS Q W+ I
Sbjct: 82 YEDDKGIMLVYDITNDKSFEKHQNWIRNI 110
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ G +LV+D+ S +NL KW+ E L Q +S+
Sbjct: 12 YYRGAMGAVLVYDIAKGTSFMNLNKWVEE-LRQHASD 47
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 274 GIILVHDLTNRKSQVNLQKWLAEI 345
GI+LV+D+T K+ N+ KWL I
Sbjct: 127 GIMLVYDITQEKTFDNISKWLRNI 150
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFF-VELWD 217
K++++GDS VGKT L + + K T+G +++ + F ++LWD
Sbjct: 48 KIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDF------WEKSLELNGEFVKLQLWD 101
Query: 218 VGGSNGHRNT 247
G R +
Sbjct: 102 TAGQERFRKS 111
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 32 EKVKVVVLGDSGVGKTSL 85
E++K V++GD GVGKTSL
Sbjct: 17 EQLKCVIVGDGGVGKTSL 34
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ +ILV D+TNR + ++ +WL + + N
Sbjct: 80 YYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKN 116
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
KV+V+GD GVGKTSL + TVG V ++ G + + ++ WD
Sbjct: 13 KVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDI-HGDRVK----LQCWDT 67
Query: 221 GGSNGHRNTRDGF 259
G R +
Sbjct: 68 AGQEKFRGITQSY 80
>SB_48143| Best HMM Match : Sialidase (HMM E-Value=0.33)
Length = 317
Score = 29.9 bits (64), Expect = 2.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 243 TQEMVLPTNAWNHIGARFDEQKKSSE 320
T E+++P N W H+ +D + K +E
Sbjct: 155 TTEVIVPANVWTHVAGVYDSKTKFAE 180
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVG 139
K+V++GDSGVGK++L N+ L T+G
Sbjct: 20 KIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIG 52
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAH 103
KV+V+GD GVGKTSL H
Sbjct: 673 KVLVIGDLGVGKTSLIKRYVH 693
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYK-EGTQAQNTFFVELWD 217
KV+VLGD VGK+SL ++ T+G V+ +H + +G + + ++LWD
Sbjct: 12 KVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIG--VDFFIHDFDLDGKKVK----LQLWD 65
Query: 218 VGGSNGHR 241
G +R
Sbjct: 66 TAGEEKYR 73
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -1
Query: 189 WACVPSLYLCNLTSTEQPTVHPGDKMGLLCAI 94
W C +CNLT QPT DKM L C+I
Sbjct: 35 WKCRNGSTICNLTKEFQPTDKDPDKM-LRCSI 65
>SB_55554| Best HMM Match : AAA (HMM E-Value=0.022)
Length = 1681
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2
Query: 44 VVVLGDSGVGKTSLTHLIA 100
VVVLGD+G GKT+L H ++
Sbjct: 270 VVVLGDAGSGKTTLLHALS 288
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ I+V+D+TN+ + + W+ E+ Q S N
Sbjct: 90 YYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPN 126
>SB_6416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -1
Query: 189 WACVPSLYLCNLTSTEQPTVHPGDKMGLLCAI 94
W C +CNLT QPT DKM L C+I
Sbjct: 35 WKCRNGSTICNLTKEFQPTDKDPDKM-LRCSI 65
>SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10)
Length = 280
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 44 VVVLGDSGVGKTSLTHLIAHNKPILS 121
+V+ G+SG GKT T LI H+ LS
Sbjct: 235 IVISGESGSGKTESTKLIVHHLTALS 260
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +2
Query: 38 VKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWD 217
+K++++G GKT+L H + + T G S+E + K+ + F ++WD
Sbjct: 552 MKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISME-EFRLKKDFLHRE--FIFKIWD 608
Query: 218 VGGSNGHRNTRDGF 259
GG + T F
Sbjct: 609 FGGQEDYYATHQCF 622
>SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)
Length = 1555
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = +2
Query: 32 EKVKVVVLGDSGVGKTSLTHLIAHN--KPILSPGWT---VGCSVEVKLHKYKEGTQAQNT 196
E KV++ GDS GKT+LT +A + K +LS T V + +K + KEG +
Sbjct: 303 EACKVLLEGDSVAGKTTLTKKLASDWAKGVLSGSSTFPEVELLLVLKCSEMKEGNEGVGI 362
Query: 197 F 199
F
Sbjct: 363 F 363
>SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 304 RKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGST 417
R S +L W + + + PT QH+ V PE L S+
Sbjct: 570 RDSHTSLDDWKKSVKRGNRALPTPQHLIVSPEDILASS 607
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/17 (64%), Positives = 16/17 (94%)
Frame = +2
Query: 38 VKVVVLGDSGVGKTSLT 88
VKVV++G+ GVGK++LT
Sbjct: 862 VKVVIIGEDGVGKSALT 878
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 35 KVKVVVLGDSGVGKTSLTHLIAHNKPILSPGW--TVGCSVEVKLHKYKEGTQA 187
+ KV+V GDS VGK++L + + + TVG V VKL E T +
Sbjct: 5 RAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNIPETTDS 57
>SB_10432| Best HMM Match : OmpH (HMM E-Value=5.2)
Length = 393
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWTV--GCSVEV-KLHKYKEGTQAQNTF 199
KV++ GDSG GKT+LT +A + K +LS T G + V K + KEG + F
Sbjct: 318 KVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEGELLLVWKCSEMKEGNEVVGIF 375
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 274 GIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTL 375
GI+LV+D+T S ++ +WL I +D+++P +
Sbjct: 4 GILLVYDITTEDSFKHISQWLQNI--EDNASPNV 35
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 29 IEKVKVVVLGDSGVGKTSLT 88
+++ KVVVLG GVGK++LT
Sbjct: 1 MKEYKVVVLGSGGVGKSALT 20
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 29 IEKVKVVVLGDSGVGKTSLT 88
+++ KVVVLG GVGK++LT
Sbjct: 1 MKEYKVVVLGSGGVGKSALT 20
>SB_57152| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.1e-25)
Length = 316
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -2
Query: 434 TKIGICVEPKNCS--GSTSTCCKVGFELS*FNI 342
T + +C +PKNC G C VGF+ F +
Sbjct: 18 TPLSVCTKPKNCENCGFEKYCIVVGFDSDFFGL 50
>SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1627
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 44 VVVLGDSGVGKTSLTHLIAHNKPILSPGWT 133
+V+ GDSG GKTSL + A L P WT
Sbjct: 386 LVLYGDSGCGKTSLVAMTAK----LVPSWT 411
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2
Query: 29 IEKVKVVVLGDSGVGKTSLT 88
+ ++VVVLG GVGK++LT
Sbjct: 14 VRSLRVVVLGQDGVGKSALT 33
>SB_16779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 29 IEKVKVVVLGDSGVGKTSLTHLIA 100
++ V+V+V+G GVGKT + + +A
Sbjct: 12 VKAVRVMVMGQDGVGKTDIRYTLA 35
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 250 RWFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
R +Y+ G +LV+D+++R++ +L WL + S N
Sbjct: 162 RSYYRGAAGALLVYDISSRETFNSLTNWLTDARTLASPN 200
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,611,253
Number of Sequences: 59808
Number of extensions: 582721
Number of successful extensions: 1691
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1691
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2359470773
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -