Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30423
(837 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 63 3e-10
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 43 3e-04
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 42 7e-04
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 40 0.002
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 40 0.002
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 40 0.002
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 40 0.003
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 40 0.003
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 39 0.004
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 39 0.005
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 39 0.005
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 37 0.020
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 36 0.036
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 36 0.036
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 36 0.047
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 36 0.047
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 35 0.062
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 35 0.062
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 35 0.062
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 35 0.082
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 35 0.082
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 34 0.11
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 34 0.11
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 34 0.14
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 32 0.44
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 32 0.44
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 32 0.58
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 32 0.58
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 31 0.77
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 31 0.77
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 31 0.77
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 31 1.0
U42832-3|AAA83573.2| 361|Caenorhabditis elegans Tetraspanin fam... 31 1.0
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 31 1.0
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 31 1.0
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 31 1.3
Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 30 1.8
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 30 1.8
Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 30 2.3
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 30 2.3
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 30 2.3
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 30 2.3
U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated p... 30 2.3
U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated p... 30 2.3
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 30 2.3
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 30 2.3
M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related... 30 2.3
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 30 2.3
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 30 2.3
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 29 3.1
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 29 3.1
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 29 4.1
AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal m... 29 4.1
AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal m... 29 4.1
AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal m... 29 4.1
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 29 5.4
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 29 5.4
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 29 5.4
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 29 5.4
AC024138-1|AAU05565.1| 319|Caenorhabditis elegans Hypothetical ... 29 5.4
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 28 7.2
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 28 7.2
U39471-1|AAA80132.4| 461|Caenorhabditis elegans Intestinal acid... 28 7.2
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 28 7.2
AC006708-19|AAF60423.3| 588|Caenorhabditis elegans Mtm (myotubu... 28 7.2
Z92812-3|CAB07282.2| 342|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 28 9.5
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 28 9.5
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 28 9.5
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 62.9 bits (146), Expect = 3e-10
Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGW----TVGCSVEVKLHKYKEGTQAQNTFFVE 208
K++VLGDS VGKTSL H IA G T+G +V + H+Y+ GT Q T +E
Sbjct: 10 KILVLGDSCVGKTSLCHCIAGGGEPPGGGRSFDSTIGATVVMAWHEYRAGTPEQRTELLE 69
Query: 209 LWDVGGSNGHRNTRDGF 259
LWD+GG HR F
Sbjct: 70 LWDIGGMVAHRQAAQVF 86
Score = 48.4 bits (110), Expect = 6e-06
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI-------LNQDSSNPTLQHVDVDPEQFLGS 414
F++ G ILVHDLTN++S+ NL WL + + S +P + VD E S
Sbjct: 86 FFEGAVGAILVHDLTNKRSEENLATWLTMLDGKPRGAAPKSSKDPAAVALKVDIE----S 141
Query: 415 TQIPILVIGTKYDAAEEK 468
IP+L++GTK D K
Sbjct: 142 CNIPVLIVGTKADLVPHK 159
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 570 GSTNSVKLTRFFDKVIERRYYSRVSPFSDKRRIPPYIMATSTP 698
GS NS+ L+RFFD ++R + ++ S P M + P
Sbjct: 178 GSANSITLSRFFDSCLDRTRRTSLNSSSSSFFTKPRSMTPNLP 220
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/74 (33%), Positives = 37/74 (50%)
Frame = +2
Query: 20 MAAIEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTF 199
M I+ VKVVV+G+SG GKT+L N P T+G + K+ + +G +
Sbjct: 1 MDTIKTVKVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIR--- 57
Query: 200 FVELWDVGGSNGHR 241
++LWD G R
Sbjct: 58 -LQLWDTAGQERFR 70
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSS 363
+Y+ THG+++V+D+TN +S N+++WL EI N S
Sbjct: 79 YYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDS 114
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K++++GDSGVGK+SL A N S + V+ K+ Q +++WD
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADN--TFSENYITTIGVDFKIRTMDINGQRVK---LQIWDT 66
Query: 221 GGSNGHR 241
G R
Sbjct: 67 AGQERFR 73
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
KV+V+GD GVGKTS+ HN + T+G +K+ E T +++WD+
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENT----VVHLQIWDI 68
Query: 221 GGSN 232
G +
Sbjct: 69 SGQD 72
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
KV+V+GD GVGKTS+ HN + T+G +K+ E T +++WD+
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENT----VVHLQIWDI 68
Query: 221 GGSN 232
G +
Sbjct: 69 SGQD 72
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQK-WLAEILNQDSSNPTLQHV----DVDPEQ 402
+Y HG++ V+D+TN KS NL+K WL EI N L V D+D E+
Sbjct: 75 YYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQER 128
Score = 31.9 bits (69), Expect = 0.58
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K+VV+GD GK+ + A N + T+G V+ KL K G ++ +ELWD
Sbjct: 8 KIVVVGDHNCGKSCILLRFAENSFRMDHISTLG--VDFKLKTIKLG---RDKIRLELWDT 62
Query: 221 GGSNGHRNTRDGF 259
G +R + +
Sbjct: 63 AGMERYRTIYNSY 75
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +2
Query: 35 KVKVVVLGDSGVGKTSLTH---LIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFV 205
K KVVVLGDSGVGKTS+ + AH +P+ + T+G S V + ++ +
Sbjct: 52 KAKVVVLGDSGVGKTSIIYRHRYGAHYRPVNA---TIGASF-VSFDVGADYRDREDVVRL 107
Query: 206 ELWDVGGSNGHR 241
++WD G R
Sbjct: 108 QVWDTAGQERFR 119
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHN--KPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 214
KVV +GDS VGKT H HN KP+ + T+G VK K ++LW
Sbjct: 204 KVVFVGDSAVGKTCFLHRFCHNRFKPLFNA--TIGVDFTVKTMK----IPPNRAIAMQLW 257
Query: 215 DVGGSNGHRN 244
D G R+
Sbjct: 258 DTAGQERFRS 267
Score = 27.9 bits (59), Expect = 9.5
Identities = 7/30 (23%), Positives = 21/30 (70%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+++ G++L+ D+T+ +S +N++ W+ +
Sbjct: 272 YFRKADGVVLMFDVTSEQSFLNVRNWIDSV 301
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +2
Query: 35 KVKVVVLGDSGVGKTSLTH---LIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFV 205
K KVVVLGDSGVGKTS+ + AH +P+ + T+G S V + ++ +
Sbjct: 52 KAKVVVLGDSGVGKTSIIYRHRYGAHYRPVNA---TIGASF-VSFDVGADYRDREDVVRL 107
Query: 206 ELWDVGG 226
++WD G
Sbjct: 108 QMWDTAG 114
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Frame = +2
Query: 38 VKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKE-----GTQAQNTFF 202
+K + LGDSGVGKTS H N TVG + K YK G + Q
Sbjct: 8 IKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRV-L 66
Query: 203 VELWDVGGSNGHRNTRDGFTNQRM 274
++LWD G R+ F M
Sbjct: 67 LQLWDTAGQERFRSLTTAFFRDAM 90
Score = 33.5 bits (73), Expect = 0.19
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
F++ G IL+ D+TN +S +N++ WL+++
Sbjct: 85 FFRDAMGFILIFDITNEQSFLNIRDWLSQL 114
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Frame = +2
Query: 38 VKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKE-----GTQAQNTFF 202
+K + LGDSGVGKTS H N TVG + K YK G + Q
Sbjct: 8 IKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRV-L 66
Query: 203 VELWDVGGSNGHRNTRDGFTNQRM 274
++LWD G R+ F M
Sbjct: 67 LQLWDTAGQERFRSLTTAFFRDAM 90
Score = 33.5 bits (73), Expect = 0.19
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
F++ G IL+ D+TN +S +N++ WL+++
Sbjct: 85 FFRDAMGFILIFDITNEQSFLNIRDWLSQL 114
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 36.7 bits (81), Expect = 0.020
Identities = 13/30 (43%), Positives = 25/30 (83%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ HGII+V+D+T++++ N+++WL EI
Sbjct: 80 YYRGAHGIIVVYDITDQETFNNVKQWLQEI 109
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K++++GDSGVGK+ L A + S T+G +++ + +G T +++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG----KTIKLQIWDT 67
Query: 221 GGSNGHRNTRDGF 259
G R +
Sbjct: 68 AGQERFRTITSSY 80
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 35.9 bits (79), Expect = 0.036
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ GI+LV+D+TN KS N+ KWL I
Sbjct: 78 YYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLI---AHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVEL 211
K++++GDSGVGKT + + A N +S T+G ++K + K G + + +++
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFIS---TIGIDFKIKTIELK-GKKIK----LQI 62
Query: 212 WDVGG 226
WD G
Sbjct: 63 WDTAG 67
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 35.9 bits (79), Expect = 0.036
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ GI+LV+D+TN KS N+ KWL I
Sbjct: 78 YYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLI---AHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVEL 211
K++++GDSGVGKT + + A N +S T+G ++K + K G + + +++
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFIS---TIGIDFKIKTIELK-GKKIK----LQI 62
Query: 212 WDVGG 226
WD G
Sbjct: 63 WDTAG 67
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 35.5 bits (78), Expect = 0.047
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +1
Query: 250 RWFYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
R +Y+ G +LV+D+T RKS V+L++WL+++
Sbjct: 73 RAYYRNALGALLVYDITCRKSFVHLEQWLSDL 104
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K V++GD GVGK++L L+ + P T VE YK+ + + +WD
Sbjct: 8 KYVIIGDGGVGKSNL--LLRFTDELFDPIHTTTLGVE---FGYKDLQIDKYKVRLRVWDT 62
Query: 221 GGSNGHRN 244
G R+
Sbjct: 63 CGQENFRS 70
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 35.5 bits (78), Expect = 0.047
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGSTQIPILV 435
+Y+ ++G++LV D+T+RKS ++ W+ EI + LG+T IL+
Sbjct: 81 YYRGSNGVLLVFDITDRKSFEKVKNWVLEI-----------------KTCLGNT-AEILI 122
Query: 436 IGTKYDAAEEKQRKNQ 483
+G K D EE+Q Q
Sbjct: 123 VGNKIDLEEERQVTRQ 138
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ GIILV+D+TN +S N++ W+ I +S+
Sbjct: 77 YYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASD 113
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ GIILV+D+TN +S N++ W+ I +S+
Sbjct: 77 YYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASD 113
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ GIILV+D+TN +S N++ W+ I +S+
Sbjct: 77 YYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASD 113
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 34.7 bits (76), Expect = 0.082
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
KVV++GDSGVGK++L N+ L T+G + EG T ++WD
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISV-EG----KTVKAQIWDT 67
Query: 221 GGSNGHR 241
G +R
Sbjct: 68 AGQERYR 74
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHV 384
+Y+ G +LV+D+ + N+++WL E+ + N + V
Sbjct: 80 YYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPV 122
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 34.7 bits (76), Expect = 0.082
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
KVV++GDSGVGK++L N+ L T+G + EG T ++WD
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV-EG----KTVKAQIWDT 67
Query: 221 GGSNGHR 241
G +R
Sbjct: 68 AGQERYR 74
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ G +LV+D+ + N+++WL E+ + N
Sbjct: 80 YYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQN 116
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
+++V+GDS VGK+SL K TVG ++ + + G + + ++LWD
Sbjct: 19 RLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVK----LQLWDT 74
Query: 221 GGSNGHRN-TRDGFTN 265
G R+ T+ + N
Sbjct: 75 AGQEKFRSITKSYYRN 90
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAE-ILNQDSSNPT 372
+Y+ + G++ ++D TNR+S +++ W+ E LN +P+
Sbjct: 87 YYRNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPS 126
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
KVV++G++GVGKT L I PG + V+ + K G + +++WD
Sbjct: 9 KVVLVGNAGVGKTCLVRKFTQG--IFPPGQSATIGVDFMIKTVKVG---NDKIKLQIWDT 63
Query: 221 GGSNGHRNTRDGF 259
G R+ +
Sbjct: 64 AGQERFRSITQSY 76
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ H I+LV+D++ + S L +WL EI
Sbjct: 76 YYRSAHAIVLVYDVSCQPSFDCLPEWLGEI 105
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K+V++GD GVGKT + + + G T+G +K +G + + +++WD
Sbjct: 12 KIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKT-LVVDGKRVK----LQIWDT 66
Query: 221 GGSNGHRNTRDGF 259
GG R +
Sbjct: 67 GGQERFRTITQSY 79
Score = 31.5 bits (68), Expect = 0.77
Identities = 10/30 (33%), Positives = 23/30 (76%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ +GI+L +D+T ++S +LQ+W+ ++
Sbjct: 79 YYRSANGIVLCYDITCKQSFGSLQRWIDDV 108
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +2
Query: 38 VKVVVLGDSGVGKTSL 85
+KV++LGDSGVGKTSL
Sbjct: 10 LKVIILGDSGVGKTSL 25
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like
protein.
Length = 70
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +2
Query: 38 VKVVVLGDSGVGKTSL 85
+KV++LGDSGVGKTSL
Sbjct: 10 LKVIILGDSGVGKTSL 25
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K+V++G+ GVGK++L N+ L T+G K+ EG + V++WD
Sbjct: 10 KIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISV-EGKAVK----VQIWDT 64
Query: 221 GGSNGHR 241
G R
Sbjct: 65 AGMERFR 71
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 31.9 bits (69), Expect = 0.58
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 44 VVVLGDSGVGKT-SLTHLIAHNKPILSPGWTVGCSVEVKL 160
VV+ G+SG GKT S HL++H + G T GCS E L
Sbjct: 257 VVISGESGSGKTESTNHLMSHLISLSQKGST-GCSTEQTL 295
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ G +LV+D+T+R+S +L+ WL ++
Sbjct: 75 YYRHAIGALLVYDITSRESFYHLEHWLTDL 104
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ ++LV+D+ NR S N + WL++I
Sbjct: 72 YYRDADALLLVYDIANRASFENCRNWLSQI 101
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ ++LV+D+ NR S N + WL++I
Sbjct: 72 YYRDADALLLVYDIANRASFENCRNWLSQI 101
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
+Y+ I+V+D+TN++S + W+ E+ Q S N
Sbjct: 88 YYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPN 124
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +1
Query: 250 RWFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTL 375
R +Y+ G ++V+D+T R + +L WLA+ + + N +
Sbjct: 78 RSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAI 119
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K +++GD GVGK+ L H K + T+G ++ + G + + +++WD
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEV-SGQKIK----LQIWDT 67
Query: 221 GGSNGHR 241
G R
Sbjct: 68 AGQERFR 74
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLI--AHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELW 214
+VV+LG G GKTS+ + +++P T+G ++E +H YK + + W
Sbjct: 371 RVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIET-IH-YK-------NYRLNFW 421
Query: 215 DVGG 226
DVGG
Sbjct: 422 DVGG 425
>U42832-3|AAA83573.2| 361|Caenorhabditis elegans Tetraspanin family
protein 16 protein.
Length = 361
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 280 ILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHV 384
IL +DL + S +++ W+ + +D NPT H+
Sbjct: 185 ILGYDLNSHVSSSDMEHWMKHSIKEDYGNPTAPHI 219
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ G+I V+D+T+R S L W+ E+
Sbjct: 53 YYRGAQGVICVYDVTSRSSFEKLNHWMQEV 82
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ G+I V+D+T+R S L W+ E+
Sbjct: 80 YYRGAQGVICVYDVTSRSSFEKLNHWMQEV 109
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 250 RWFYQPTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSN 366
R +Y+ G +LV+D+T R + +L WL + +SN
Sbjct: 73 RSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSN 111
>Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical
protein ZK858.5 protein.
Length = 409
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 394 PEQFLGSTQIPILVIGTKYDAAEEKQRKNQYRRLASSIVNNAVLTKY 534
PE F+ + + +L+IG YD+ K N+Y +L + NN K+
Sbjct: 34 PEAFVFFSTLGVLLIGWLYDSFMFKYEVNEYNQLINQSENNKEKEKW 80
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +2
Query: 26 AIEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFV 205
A++K K+V LG+ VGKTS+ ++ + T+G K Y E T +
Sbjct: 8 ALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKT-MYLE----DRTIRL 62
Query: 206 ELWDVGGSNGHRN 244
+LWD G R+
Sbjct: 63 QLWDTAGQERFRS 75
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K+V++GD GVGKT + + + G T+G +K +G + + +++WD
Sbjct: 12 KIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKT-LVVDGKRVK----LQIWDT 66
Query: 221 GG 226
G
Sbjct: 67 AG 68
>Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical
protein D2030.2b protein.
Length = 470
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 29 IEKVKVVVLGDSGVGKTSLTHLIA 100
+EK V+++G SGVGKT LT +A
Sbjct: 139 LEKSNVLLVGPSGVGKTFLTQTLA 162
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 29 IEKVKVVVLGDSGVGKTSLTHLIA 100
+EK V+++G SGVGKT LT +A
Sbjct: 255 LEKSNVLLVGPSGVGKTFLTQTLA 278
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ G IL++D+TN +S ++Q W +I
Sbjct: 91 YYRGAMGFILMYDITNEESFNSVQDWCTQI 120
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ G IL++D+TN +S ++Q W +I
Sbjct: 91 YYRGAMGFILMYDITNEESFNSVQDWCTQI 120
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K +++GD GVGK+ L H K + T+G ++ + G + + +++WD
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEV-SGQKIK----LQIWDT 67
Query: 221 GG 226
G
Sbjct: 68 AG 69
>U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated
protein 104, isoforma protein.
Length = 1584
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +1
Query: 265 PTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGSTQIPILVIG 441
PTHGI L+H R+ ++ + E+ +D + + PE + G + +L +G
Sbjct: 1082 PTHGIFLLHQGIQRRIKITICHEKGELKWKDCQELVVGRIRAGPE-WAGGDDVDVLSLG 1139
>U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated
protein 104, isoformb protein.
Length = 1628
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +1
Query: 265 PTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGSTQIPILVIG 441
PTHGI L+H R+ ++ + E+ +D + + PE + G + +L +G
Sbjct: 1129 PTHGIFLLHQGIQRRIKITICHEKGELKWKDCQELVVGRIRAGPE-WAGGDDVDVLSLG 1186
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ G IL++D+TN +S ++Q W +I
Sbjct: 91 YYRGAMGFILMYDITNEESFNSVQDWCTQI 120
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ G IL++D+TN +S ++Q W +I
Sbjct: 105 YYRGAMGFILMYDITNEESFNSVQDWCTQI 134
>M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related
protein protein.
Length = 1584
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +1
Query: 265 PTHGIILVHDLTNRKSQVNLQKWLAEILNQDSSNPTLQHVDVDPEQFLGSTQIPILVIG 441
PTHGI L+H R+ ++ + E+ +D + + PE + G + +L +G
Sbjct: 1082 PTHGIFLLHQGIQRRIKITICHEKGELKWKDCQELVVGRIRAGPE-WAGGDDVDVLSLG 1139
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +2
Query: 38 VKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWD 217
+K+VV+GD GKTS+ A S T+G + Q V++WD
Sbjct: 36 IKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQV----LVQVWD 91
Query: 218 VGGSN 232
+GG +
Sbjct: 92 IGGQS 96
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 277 IILVHDLTNRKSQVNLQKWLAEILNQDSSNPT 372
+ LV+D+TN KS N WL+ + S+ T
Sbjct: 112 VFLVYDVTNSKSFENAVDWLSVVKKNTKSSET 143
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 256 FYQPTHGIILVHDLTNRKSQVNLQKWLAEI 345
+Y+ G IL++D+TN +S ++Q W +I
Sbjct: 91 YYRGAMGFILMYDITNEESFNSVQDWCTQI 120
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLT 88
K+VV+GD GVGK+SLT
Sbjct: 19 KLVVIGDGGVGKSSLT 34
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLT 88
K+VV+GD GVGK+SLT
Sbjct: 19 KLVVIGDGGVGKSSLT 34
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +2
Query: 29 IEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVE 208
++K K+V LG+ VGKTSL ++ + T+G K Y E T ++
Sbjct: 8 LKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKT-MYLE----DRTVRLQ 62
Query: 209 LWDVGGSNGHRN 244
LWD G R+
Sbjct: 63 LWDTAGQERFRS 74
>AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform c protein.
Length = 565
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 44 VVVLGDSGVGKTSLTHLIAHNKP 112
+++ GDSG+GKTSL +IA P
Sbjct: 410 LLITGDSGIGKTSLMRVIADMWP 432
>AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform b protein.
Length = 626
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 44 VVVLGDSGVGKTSLTHLIAHNKP 112
+++ GDSG+GKTSL +IA P
Sbjct: 438 LLITGDSGIGKTSLMRVIADMWP 460
>AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform a protein.
Length = 598
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 44 VVVLGDSGVGKTSLTHLIAHNKP 112
+++ GDSG+GKTSL +IA P
Sbjct: 410 LLITGDSGIGKTSLMRVIADMWP 432
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +2
Query: 29 IEKVKVVVLGDSGVGKTSLT 88
+++ K+VVLG+ GVGK++LT
Sbjct: 1 MKEYKIVVLGNGGVGKSALT 20
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHN 106
K+VV+GD GVGK++LT + N
Sbjct: 5 KLVVVGDGGVGKSALTIQLIQN 26
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHN 106
K++++GDSGVGK+SL A N
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADN 33
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHN 106
K+VV+GD GVGK++LT + N
Sbjct: 8 KLVVVGDGGVGKSALTIQLIQN 29
>AC024138-1|AAU05565.1| 319|Caenorhabditis elegans Hypothetical
protein H08J11.2 protein.
Length = 319
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 439 RSLKSESVWNLRTVPDRRLHAVKLDSNCPDSIF 341
RSL S+ + RTV DRRL + L S PD F
Sbjct: 57 RSLTGSSLASPRTVVDRRLSNISLLSPTPDEDF 89
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/77 (29%), Positives = 30/77 (38%)
Frame = +2
Query: 29 IEKVKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVE 208
I K+V++GD G GKT T + H + VEV H T F
Sbjct: 7 IPTFKLVLVGDGGTGKT--TFVKRHLTGEFEKKYVATLGVEV--HPLVFHTNRGQIRF-N 61
Query: 209 LWDVGGSNGHRNTRDGF 259
+WD G RDG+
Sbjct: 62 VWDTAGQEKFGGLRDGY 78
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 29 IEKVKVVVLGDSGVGKTSLT 88
+ + KVVVLG GVGK++LT
Sbjct: 1 MREFKVVVLGSGGVGKSALT 20
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Frame = +2
Query: 38 VKVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKE-----GTQAQNTFF 202
+K + GD GVGKTS H N TVG + K Y+ G + Q
Sbjct: 8 IKFLAPGDPGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYESSRGGFGGRGQRV-L 66
Query: 203 VELWDVGG 226
+++WD G
Sbjct: 67 LQIWDTAG 74
>U39471-1|AAA80132.4| 461|Caenorhabditis elegans Intestinal acid
phosphatase protein4 protein.
Length = 461
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = -3
Query: 409 LRTVPDRRLHAVKLDSNCP--DSIFQRATSEDSL-DFFCSS 296
+ T+PD H + +D+ CP D+I+ A + D++ ++F SS
Sbjct: 165 IHTIPDAEDHLLSVDNYCPLQDTIWNLAKTTDTVSNYFNSS 205
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 35 KVKVVVLGDSGVGKTSLTHLIAHNK 109
K+K+VV+GD+ GKTSL L+A+ K
Sbjct: 4 KLKLVVVGDTYTGKTSL--LVAYTK 26
>AC006708-19|AAF60423.3| 588|Caenorhabditis elegans Mtm
(myotubularin) family protein 1 protein.
Length = 588
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 619 NVDTIRELVHFQIKDVFPRTSWLRQLLFLTTDHLNI*VQGFIIWIK 756
NVDT ++ V D + RT+ L L + D ++GFI+ I+
Sbjct: 366 NVDTEKQSVLIHCSDGWDRTAQLTSLAMIQLDSYYRTIEGFIVLIE 411
>Z92812-3|CAB07282.2| 342|Caenorhabditis elegans Hypothetical
protein T03E6.3 protein.
Length = 342
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 424 ESVWNLRTVPDRRLHAVKLDSNCPDS-IFQRATSEDSLD 311
E WN+R V R L ++D NC +S +F+ S + ++
Sbjct: 271 EMCWNIRKVILRELRNYQIDGNCEESRLFETLESLEYIE 309
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2
Query: 29 IEKVKVVVLGDSGVGKTSLT 88
+ + K+VVLG GVGK++LT
Sbjct: 1 MREYKIVVLGSGGVGKSALT 20
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 41 KVVVLGDSGVGKTSLTHLIAHNKPILSPGWTVGCSVEVKLHKYKEGTQAQNTFFVELWDV 220
K++++GDSGVGK+ L A + S T+G +++ + +G T +++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG----KTIKLQIWDT 67
Query: 221 GG 226
G
Sbjct: 68 AG 69
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 234 PFEPPTSQSSTKNVFWACVPSLYLCNLTSTEQPTVHP 124
PF+ PT+++ T + FW PS + ST PT+ P
Sbjct: 728 PFDLPTAETFTLSNFWLTTPSSAPSIVPST--PTISP 762
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,223,918
Number of Sequences: 27780
Number of extensions: 446529
Number of successful extensions: 1344
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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