Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30419
(496 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4; Bilateria|... 97 3e-19
UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204; Euka... 94 2e-18
UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2; Ost... 89 4e-17
UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56; Euk... 89 7e-17
UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3; Eukary... 84 2e-15
UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3; Eukary... 58 1e-07
UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole ge... 55 1e-06
UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1; ... 53 3e-06
UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1; Enceph... 42 0.006
UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1; ... 42 0.010
UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiel... 41 0.018
UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102... 40 0.040
UniRef50_A4ANL3 Cluster: Putative lipoprotein; n=1; Flavobacteri... 34 2.0
UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse t... 33 3.5
UniRef50_Q232P0 Cluster: MHCK/EF2 kinase domain family protein; ... 32 6.1
UniRef50_A7RPS0 Cluster: Predicted protein; n=1; Nematostella ve... 32 8.1
>UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4;
Bilateria|Rep: Ribosomal protein L27a - Ascaris suum
(Pig roundworm) (Ascaris lumbricoides)
Length = 133
Score = 96.7 bits (230), Expect = 3e-19
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +2
Query: 113 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWT 253
NAGG+HHHRIN DKYHPGYFGK+GMRNFH RKN +CP +NLDKLW+
Sbjct: 20 NAGGQHHHRINFDKYHPGYFGKVGMRNFHVRKNGLYCPTVNLDKLWS 66
Score = 49.6 bits (113), Expect = 4e-05
Identities = 29/68 (42%), Positives = 34/68 (50%)
Frame = +1
Query: 253 IVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDV 432
+VSE+TR YA D K PVI++VKA PKQPVIV V
Sbjct: 67 LVSEKTRTTYAEKKD-KAPVIDVVKAGYFKVLGKGLLPKQPVIVKAKFFSRTAEQKIKGV 125
Query: 433 GGACVLSA 456
GGAC+L A
Sbjct: 126 GGACILVA 133
>UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204;
Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens
(Human)
Length = 148
Score = 93.9 bits (223), Expect = 2e-18
Identities = 34/47 (72%), Positives = 43/47 (91%)
Frame = +2
Query: 113 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWT 253
NAGG HHHRIN DKYHPGYFGK+GM+++H ++N++FCP +NLDKLWT
Sbjct: 34 NAGGLHHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLDKLWT 80
Score = 50.4 bits (115), Expect = 2e-05
Identities = 30/88 (34%), Positives = 40/88 (45%)
Frame = +1
Query: 193 FPL*KEQEFLSSFELR*ALDIVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 372
+ L + Q F + L +VSEQTR+ A G P+I++V++ PKQ
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120
Query: 373 PVIVXXXXXXXXXXXXXXDVGGACVLSA 456
PVIV VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2;
Ostreococcus|Rep: 60s ribosomal protein L15/L27 -
Ostreococcus tauri
Length = 198
Score = 89.4 bits (212), Expect = 4e-17
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = +2
Query: 116 AGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWT 253
AGG+HHHRI MDKYHPGYFGK+GMR+FH KN+ CP +N+DKLWT
Sbjct: 86 AGGQHHHRIMMDKYHPGYFGKVGMRHFHKLKNQTVCPTINIDKLWT 131
>UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56;
Eukaryota|Rep: 60S ribosomal protein L27a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 88.6 bits (210), Expect = 7e-17
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = +2
Query: 113 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWT 253
NAGG HHHRI DKYHPGYFGK+GMR FH +NK FCP++NLDKLW+
Sbjct: 34 NAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFFCPIVNLDKLWS 80
>UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3;
Eukaryota|Rep: 60S ribosomal protein L27a - Tetrahymena
thermophila
Length = 149
Score = 83.8 bits (198), Expect = 2e-15
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +2
Query: 116 AGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWT 253
AGG HHHRI M+K+HPGY+GKLGMR FH +KN CPV+N+DKLW+
Sbjct: 37 AGGMHHHRILMEKWHPGYYGKLGMRTFHLKKNPLHCPVVNIDKLWS 82
Score = 45.2 bits (102), Expect = 8e-04
Identities = 27/68 (39%), Positives = 33/68 (48%)
Frame = +1
Query: 253 IVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDV 432
+VS+ TR KYA KVPVI++ KA P QPV+V V
Sbjct: 83 LVSDATRQKYAEDKK-KVPVIDVTKAGFFKVLGKGRLPNQPVVVKAKYFSKTAERRIVAV 141
Query: 433 GGACVLSA 456
GGACVL+A
Sbjct: 142 GGACVLTA 149
>UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3;
Eukaryota|Rep: 60S ribosomal protein L27A - Guillardia
theta (Cryptomonas phi)
Length = 144
Score = 57.6 bits (133), Expect = 1e-07
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +2
Query: 113 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKL 247
N+GG+HHH+I +KYH +FGK GMR + K NF +NLDK+
Sbjct: 34 NSGGQHHHKIFFEKYHKKHFGKTGMRYYRKLKQNNFNKSINLDKI 78
>UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole
genome shotgun sequence; n=3; Vitis vinifera|Rep:
Chromosome chr12 scaffold_159, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 151
Score = 54.8 bits (126), Expect = 1e-06
Identities = 20/35 (57%), Positives = 29/35 (82%)
Frame = +2
Query: 149 DKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWT 253
DK+HPG FGK+GMR+FH + K CP++++DKLW+
Sbjct: 28 DKHHPGNFGKVGMRHFHKLRIKLHCPIVHIDKLWS 62
>UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 187
Score = 53.2 bits (122), Expect = 3e-06
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +2
Query: 122 GEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWT 253
G ++ + YFGK+GMR+FH +N +F PV+NLDKLWT
Sbjct: 77 GSQEMEVDREIGRDSYFGKVGMRHFHLTRNSSFRPVVNLDKLWT 120
Score = 40.3 bits (90), Expect = 0.023
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 116 AGGEHHHRINMDKYHP 163
AGG+HHHR NMDKYHP
Sbjct: 35 AGGQHHHRTNMDKYHP 50
>UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L27a
- Encephalitozoon cuniculi
Length = 147
Score = 42.3 bits (95), Expect = 0.006
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 116 AGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLW 250
AGG H + ++HP Y GK GMR +H ++N ++ ++ +LW
Sbjct: 35 AGGFSHMKTFFTRFHPDYHGKRGMRVYHRKENSDYARPISSARLW 79
>UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1;
n=1; Arabidopsis thaliana|Rep: Putative 60S ribosomal
protein L27a-1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 104
Score = 41.5 bits (93), Expect = 0.010
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +2
Query: 131 HHRINMDKYHPGYFGK--LGMRNFHFRKNKNFCPVLNLDKLWT 253
H R + PG G +GMR FH +NK +C ++NLDKLW+
Sbjct: 19 HGRFGKHRKLPGSRGNAGVGMRYFHKLRNKFYCQIVNLDKLWS 61
>UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 40.7 bits (91), Expect = 0.018
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 116 AGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 217
+GG+HHH+I ++Y YF K GMR ++ K N
Sbjct: 35 SGGQHHHKIIFERYRETYFRKTGMRIYNLEKTLN 68
>UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102C;
n=2; Saccharomycetaceae|Rep: Putative uncharacterized
protein YGL102C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 142
Score = 39.5 bits (88), Expect = 0.040
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -1
Query: 253 CPKLI*VQNWTEILVLSKVEISHTKFAKVSRMVLVHVD 140
CP+ + VQ+W + L VE+SHT +++ MV +HV+
Sbjct: 73 CPQFVQVQDWLPEMSLLLVEVSHTNLTEITWMVFIHVN 110
>UniRef50_A4ANL3 Cluster: Putative lipoprotein; n=1;
Flavobacteriales bacterium HTCC2170|Rep: Putative
lipoprotein - Flavobacteriales bacterium HTCC2170
Length = 535
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -3
Query: 446 TQAPPTSLIFFSADFEKNFAFTMTGCLGSLPL 351
T A SL FFS D + N A T GCLG+ P+
Sbjct: 306 TDAEGNSLYFFSLDTKDNSACTSAGCLGAWPV 337
>UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse
transcriptase; n=1; Arabidopsis thaliana|Rep: Putative
non-LTR retroelement reverse transcriptase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1044
Score = 33.1 bits (72), Expect = 3.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 148 GQVPSWILWQTWYEKFPL*KEQEFLSSFEL 237
GQ+P WILW W + L EQ+ +SS +L
Sbjct: 842 GQLPIWILWNLWNCRNKLIFEQKHISSMDL 871
>UniRef50_Q232P0 Cluster: MHCK/EF2 kinase domain family protein;
n=1; Tetrahymena thermophila SB210|Rep: MHCK/EF2 kinase
domain family protein - Tetrahymena thermophila SB210
Length = 842
Score = 32.3 bits (70), Expect = 6.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 304 PCHLEQMHTSASSVQRLCPKLI*VQNWTEILVLSKVEIS 188
PCH ++ HT+A CPK + ++ E L +E+S
Sbjct: 184 PCHGKKYHTTADDYPEGCPKGVNIEGLIETLAKRNIELS 222
>UniRef50_A7RPS0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 306
Score = 31.9 bits (69), Expect = 8.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -3
Query: 221 RNSCSF*SGNFSYQVCQSIQDGTCPC*FCDGAHHQHYHDLLDAYGA 84
R+SC + F +C+S T PC D H +H DL+D GA
Sbjct: 108 RSSCQ--ARCFMNNLCRSYNYNTTPCQLSDSDHLEHPSDLVDKPGA 151
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,273,573
Number of Sequences: 1657284
Number of extensions: 7885684
Number of successful extensions: 19134
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19125
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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