Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30419
(496 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein. 89 2e-18
U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal prot... 89 2e-18
AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p pro... 89 2e-18
AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA... 89 2e-18
X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal prot... 87 9e-18
D10228-1|BAA01080.1| 761|Drosophila melanogaster Ets domain pro... 29 2.6
EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein. 28 8.0
EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein. 28 8.0
>U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein.
Length = 149
Score = 89.4 bits (212), Expect = 2e-18
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +2
Query: 113 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWT 253
NAGG HHHRIN DKYHPGYFGK+GMRNFH R+ F P +NLDKLW+
Sbjct: 35 NAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWS 81
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/88 (25%), Positives = 32/88 (36%)
Frame = +1
Query: 193 FPL*KEQEFLSSFELR*ALDIVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 372
F L ++ +F L +V + + K PVI++VK P +
Sbjct: 62 FHLRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPAR 121
Query: 373 PVIVXXXXXXXXXXXXXXDVGGACVLSA 456
PVIV GG C+LSA
Sbjct: 122 PVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal protein
RpL27a protein.
Length = 149
Score = 89.4 bits (212), Expect = 2e-18
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +2
Query: 113 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWT 253
NAGG HHHRIN DKYHPGYFGK+GMRNFH R+ F P +NLDKLW+
Sbjct: 35 NAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWS 81
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/88 (25%), Positives = 32/88 (36%)
Frame = +1
Query: 193 FPL*KEQEFLSSFELR*ALDIVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 372
F L ++ +F L +V + + K PVI++VK P +
Sbjct: 62 FHLRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPAR 121
Query: 373 PVIVXXXXXXXXXXXXXXDVGGACVLSA 456
PVIV GG C+LSA
Sbjct: 122 PVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p
protein.
Length = 149
Score = 89.4 bits (212), Expect = 2e-18
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +2
Query: 113 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWT 253
NAGG HHHRIN DKYHPGYFGK+GMRNFH R+ F P +NLDKLW+
Sbjct: 35 NAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWS 81
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/88 (25%), Positives = 32/88 (36%)
Frame = +1
Query: 193 FPL*KEQEFLSSFELR*ALDIVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 372
F L ++ +F L +V + + K PVI++VK P +
Sbjct: 62 FHLRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPAR 121
Query: 373 PVIVXXXXXXXXXXXXXXDVGGACVLSA 456
PVIV GG C+LSA
Sbjct: 122 PVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA
protein.
Length = 149
Score = 89.4 bits (212), Expect = 2e-18
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +2
Query: 113 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWT 253
NAGG HHHRIN DKYHPGYFGK+GMRNFH R+ F P +NLDKLW+
Sbjct: 35 NAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWS 81
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/88 (25%), Positives = 32/88 (36%)
Frame = +1
Query: 193 FPL*KEQEFLSSFELR*ALDIVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 372
F L ++ +F L +V + + K PVI++VK P +
Sbjct: 62 FHLRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPAR 121
Query: 373 PVIVXXXXXXXXXXXXXXDVGGACVLSA 456
PVIV GG C+LSA
Sbjct: 122 PVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal protein
L27a protein.
Length = 149
Score = 87.4 bits (207), Expect = 9e-18
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +2
Query: 113 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWT 253
N GG HHHRIN DKYHPGYFGK+GMRNFH R+ F P +NLDKLW+
Sbjct: 35 NLGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWS 81
Score = 32.7 bits (71), Expect = 0.28
Identities = 22/88 (25%), Positives = 33/88 (37%)
Frame = +1
Query: 193 FPL*KEQEFLSSFELR*ALDIVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 372
F L ++ +F L +V + + K PVI++VK P +
Sbjct: 62 FHLRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPAR 121
Query: 373 PVIVXXXXXXXXXXXXXXDVGGACVLSA 456
PVIV + GG C+LSA
Sbjct: 122 PVIVKAKYFSKKAEDKIKEAGGVCLLSA 149
>D10228-1|BAA01080.1| 761|Drosophila melanogaster Ets domain
protein protein.
Length = 761
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 309 RHQYCQSWILQVARQRQTPQTTCHSKSKVLLKIS 410
RH C+ + +A R+TP TC S+ + +L+ S
Sbjct: 710 RHSQCRWKAIAMAASRRTPSDTCSSRRRSVLRQS 743
>EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 119 GGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 217
GG+ +M++YH G G+R H+ N N
Sbjct: 410 GGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSN 442
>EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 119 GGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 217
GG+ +M++YH G G+R H+ N N
Sbjct: 410 GGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSN 442
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,553,896
Number of Sequences: 53049
Number of extensions: 401367
Number of successful extensions: 1376
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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