BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30418
(738 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 24 1.3
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 24 1.3
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 2.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 2.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 2.3
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 2.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 2.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 2.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 2.3
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 2.3
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 2.3
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 4.0
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 4.0
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 4.0
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 4.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 5.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 6.9
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 9.1
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 9.1
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 9.1
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 9.1
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 9.1
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 9.1
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 9.1
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 9.1
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 9.1
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 9.1
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 9.1
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 9.1
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 9.1
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 9.1
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 9.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 9.1
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 9.1
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 9.1
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 9.1
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 9.1
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 9.1
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 9.1
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 9.1
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 9.1
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 9.1
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 9.1
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 9.1
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 9.1
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 9.1
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 9.1
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 9.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 9.1
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 291 CNGFLVTLSVLCLLRHFLEFP 353
C G + T++V CLL H + P
Sbjct: 524 CLGIVATMAVACLLFHHRDTP 544
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 291 CNGFLVTLSVLCLLRHFLEFP 353
C G + T++V CLL H + P
Sbjct: 614 CLGIVATMAVACLLFHHRDTP 634
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 654 GHCKHKEQFYESSRVQSREKLEHYDQH 574
GH + Q +SSR Q REK++ +++
Sbjct: 372 GHATNLIQSLDSSRRQYREKVKQVEEY 398
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -1
Query: 630 FYESSRVQSR-EKLEHYDQHHYNEEYSCSCKR 538
F +S SR E L H D++ Y + SC R
Sbjct: 224 FQRTSSCHSRYEDLRHEDRNSYRNDGERSCSR 255
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 663 LKRGHCKHKEQFYESSRVQSREKLEHYDQHHYNEEYSCSCKR 538
+K+ + K+ S+ ++SR + HY+ E SCS R
Sbjct: 200 IKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCSRDR 241
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 663 LKRGHCKHKEQFYESSRVQSREKLEHYDQHHYNEEYSCSCKR 538
+K+ + K+ S+ ++SR + HY+ E SCS R
Sbjct: 200 IKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCSRDR 241
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 663 LKRGHCKHKEQFYESSRVQSREKLEHYDQHHYNEEYSCSCKR 538
+K+ + K+ S+ ++SR + HY+ E SCS R
Sbjct: 200 IKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCSRDR 241
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 663 LKRGHCKHKEQFYESSRVQSREKLEHYDQHHYNEEYSCSCKR 538
+K+ + K+ S+ ++SR + HY+ E SCS R
Sbjct: 200 IKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCSRDR 241
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 663 LKRGHCKHKEQFYESSRVQSREKLEHYDQHHYNEEYSCSCKR 538
+K+ + K+ S+ ++SR + HY+ E SCS R
Sbjct: 189 IKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCSRDR 230
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 663 LKRGHCKHKEQFYESSRVQSREKLEHYDQHHYNEEYSCSCKR 538
+K+ + K+ S+ ++SR + HY+ E SCS R
Sbjct: 200 IKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSRERSCSRDR 241
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 382 QIPRFRHIG 390
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 654 GHCKHKEQFYESSRVQSREKLEHYDQH 574
GH + Q +SSR Q REK++ +++
Sbjct: 340 GHATNLIQSLDSSRRQYREKVKQVEEY 366
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 487 IQNLWISGHFFIGNLYTSFTAAT 555
I+N+W+ FF+ + F AT
Sbjct: 90 IKNIWVPDTFFVNEKQSYFHIAT 112
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 487 IQNLWISGHFFIGNLYTSFTAAT 555
I+N+W+ FF+ + F AT
Sbjct: 90 IKNIWVPDTFFVNEKQSYFHIAT 112
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 4.0
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -1
Query: 588 HYDQHHYNEEYSCSCKR 538
+Y+ ++YN Y+ +CK+
Sbjct: 337 NYNNNNYNNNYNNNCKK 353
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 487 IQNLWISGHFFIGNLYTSFTAAT 555
I+N+W+ FF+ + F AT
Sbjct: 29 IKNIWVPDTFFVNEKQSYFHIAT 51
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 224 KSYVSKLLTLNREGLKAVEVVNQDCSS 144
+++V L N LKA +VV CSS
Sbjct: 33 EAFVDVTLACNEASLKAHKVVLSACSS 59
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 647 QCPRFRHLGRINSGGL 694
QCPRFR L + G+
Sbjct: 567 QCPRFRKLDSPSDSGI 582
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 137 QIPRFRHIG 145
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 137 QIPRFRHIG 145
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 137 QIPRFRHIG 145
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 137 QIPRFRHIG 145
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 137 QIPRFRHIG 145
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 137 QIPRFRHIG 145
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 148 QIPRFRHIG 156
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 148 QIPRFRHIG 156
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 148 QIPRFRHIG 156
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 148 QIPRFRHIG 156
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 140 QIPRFRHIG 148
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 140 QIPRFRHIG 148
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 140 QIPRFRHIG 148
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 140 QIPRFRHIG 148
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 145 QIPRFRHIG 153
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 146 QIPRFRHIG 154
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 146 QIPRFRHIG 154
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 146 QIPRFRHIG 154
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 146 QIPRFRHIG 154
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 146 QIPRFRHIG 154
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 146 QIPRFRHIG 154
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 146 QIPRFRHIG 154
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 146 QIPRFRHIG 154
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 141 QIPRFRHIG 149
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 143 QIPRFRHIG 151
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 143 QIPRFRHIG 151
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 143 QIPRFRHIG 151
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 143 QIPRFRHIG 151
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 149 QIPRFRHIG 157
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 369 QIPRFRHIG 377
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 371 QIPRFRHIG 379
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 388 QIPRFRHIG 396
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 647 QCPRFRHLG 673
Q PRFRH+G
Sbjct: 373 QIPRFRHIG 381
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,741
Number of Sequences: 438
Number of extensions: 3651
Number of successful extensions: 51
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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