Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30416
(740 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0240 + 15958110-15958305,15959586-15960763 36 0.045
01_06_0036 + 25786530-25786756,25788000-25788076,25788538-257886... 33 0.31
08_02_0996 - 23404595-23405596 32 0.55
11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679 31 0.73
08_02_0997 + 23409932-23410894 31 0.96
06_03_1338 - 29440373-29440534,29440993-29441083,29441799-294419... 31 0.96
09_04_0421 + 17417851-17418840 31 1.3
07_03_1218 + 24955627-24955631,24955883-24955937,24956015-249561... 30 1.7
09_04_0412 + 17369935-17370873 30 2.2
09_04_0411 + 17366559-17367497 30 2.2
05_03_0510 + 14864430-14864792,14865234-14865485,14865573-148656... 30 2.2
10_08_0004 + 14022511-14022670,14022740-14023049,14023193-140234... 29 2.9
07_01_0447 - 3377666-3378673 29 2.9
03_02_0423 + 8321076-8322164 29 2.9
01_01_0379 - 2956396-2957409 29 2.9
07_03_1465 - 26729872-26730909 29 3.9
04_01_0497 - 6522998-6523669,6523684-6523716 29 3.9
01_01_0378 - 2953514-2954341,2954388-2954504 29 3.9
11_06_0703 + 26444128-26446215,26446525-26447226 29 5.1
11_06_0388 + 23048576-23051546,23051830-23052371,23052444-230525... 29 5.1
11_01_0320 - 2406706-2406943,2407297-2407385,2407463-2408335,240... 29 5.1
03_05_0487 + 24838620-24838967,24840526-24840747,24840819-248411... 29 5.1
01_06_1559 + 38247463-38247499,38247711-38247747,38248181-382482... 29 5.1
11_06_0437 - 23533218-23536382 28 6.8
09_04_0417 + 17404433-17405392 28 6.8
07_03_1467 - 26736859-26736868,26737769-26738439 28 6.8
07_03_0776 + 21417476-21417691,21417775-21417855,21417941-214183... 28 6.8
06_03_1199 - 28339942-28340703 28 6.8
06_01_0782 - 5848381-5849394,5851143-5851255,5851337-5851440,585... 28 6.8
04_04_0052 + 22386553-22387506 28 6.8
01_01_0370 + 2895685-2895717,2895892-2896944 28 6.8
12_02_0885 + 23994354-23994584,23994987-23995342,23995549-239956... 28 9.0
08_01_0048 + 335868-336682,338382-340386 28 9.0
07_03_1469 - 26742772-26743848 28 9.0
04_04_1166 - 31427523-31428154,31428888-31429020 28 9.0
03_06_0249 + 32638112-32639140 28 9.0
02_05_0955 - 33056171-33057256 28 9.0
>09_04_0240 + 15958110-15958305,15959586-15960763
Length = 457
Score = 35.5 bits (78), Expect = 0.045
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +2
Query: 281 PPLGSLRFKAPQSPE-PWDGIRDATAEGNVCAQIDPVFAKSYVGDENCLFLNVYTP---- 445
P S RF AP+ W RD T GN A D V + DE + + V+ P
Sbjct: 52 PKAHSDRFGAPERVGGSWCATRDKTRSGNGVATKDVV-----IDDETGVSVRVFLPVDAA 106
Query: 446 ---STDGAFLPVMIWIHGGGFKWGPA 514
+ G LP+++++HGG F G A
Sbjct: 107 AAAAAAGRRLPLVVYVHGGAFCTGSA 132
>01_06_0036 +
25786530-25786756,25788000-25788076,25788538-25788625,
25788706-25788786,25788866-25788940,25789048-25789149,
25789589-25789726,25791559-25791585,25791696-25791786,
25792423-25792584
Length = 355
Score = 32.7 bits (71), Expect = 0.31
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +1
Query: 541 LVDRDVVVMTINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNIHHFGGNAGNLTI 720
L +R ++V I+YR N P+ + D Q I +V +NI +GG+ + +
Sbjct: 170 LAERGIIVACIDYR---------NFPQGTIGDMVSDASQGISYVCNNIASYGGDPNRIYL 220
Query: 721 FGESAG 738
G+SAG
Sbjct: 221 VGQSAG 226
>08_02_0996 - 23404595-23405596
Length = 333
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 386 VFAKSYVGDENC-LFLNVYTPSTDGAFLPVMIWIHGGGF 499
V +K V D + L + +Y P G LPV+I+ HGG F
Sbjct: 71 VVSKDVVVDRSTGLAVRLYRPKHRGGRLPVLIYFHGGAF 109
>11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679
Length = 939
Score = 31.5 bits (68), Expect = 0.73
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 236 VREGLLR-FQGIPYAKPPLGSLRFKAPQSPEPWDGIRDATAEGN-VCAQIDPVFAKSY 403
V G+LR G+P A + SL PQ+ E W+ RD+ E + + ++ + + SY
Sbjct: 372 VSNGILRKCGGLPLAIITMASLLVNKPQTKEQWEKYRDSIVENDPIVNRMQKILSLSY 429
>08_02_0997 + 23409932-23410894
Length = 320
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +2
Query: 422 LFLNVYTPSTDGA---FLPVMIWIHGGGFKWGPA 514
L+ +Y P DG LPV++++HGGG G A
Sbjct: 56 LWARLYLPDLDGGERKLLPVVVYLHGGGLVVGSA 89
>06_03_1338 -
29440373-29440534,29440993-29441083,29441799-29441942,
29442094-29442159,29442589-29442729,29443077-29443178,
29443264-29443338,29443469-29443549,29443670-29443739,
29444063-29444139,29444392-29444660
Length = 425
Score = 31.1 bits (67), Expect = 0.96
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 541 LVDRDVVVMTINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNIHHFGGNAGNLTI 720
L +R ++V I+YR N P+ ++D Q I +V +NI +GG+ + +
Sbjct: 178 LAERGILVACIDYR---------NFPQGTIGDMVEDASQGIAFVCNNIASYGGDPERIYL 228
Query: 721 FGESAG 738
G+SAG
Sbjct: 229 VGQSAG 234
>09_04_0421 + 17417851-17418840
Length = 329
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Frame = +2
Query: 434 VYTPSTD----GAFLPVMIWIHGGGFKWGPA 514
+Y PST G LPV+++ HGGGF G A
Sbjct: 65 IYLPSTPASGYGRRLPVLVFFHGGGFCLGSA 95
>07_03_1218 +
24955627-24955631,24955883-24955937,24956015-24956131,
24957142-24957306,24957703-24957958,24957987-24958051
Length = 220
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +2
Query: 377 IDPVFAKSYVGDENCLFL-NVYTPSTD--GAFLPVMIWIHGGGFKWGPAIPTCM 529
+ V AK+ G + L L N +T D G LP + W GG GP + C+
Sbjct: 48 VGAVLAKNNPGKVSALILENTFTSILDMAGIMLPFLRWFIGGSSSKGPKLLNCV 101
>09_04_0412 + 17369935-17370873
Length = 312
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +2
Query: 386 VFAKSYVGDENC-LFLNVYTPSTD----GAFLPVMIWIHGGGF 499
V +K V D LF+ V+ P G LPV+++ HGGGF
Sbjct: 42 VVSKDVVLDAGTGLFVRVFLPKVQDQELGKKLPVLVYFHGGGF 84
>09_04_0411 + 17366559-17367497
Length = 312
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +2
Query: 386 VFAKSYVGDENC-LFLNVYTPSTD----GAFLPVMIWIHGGGF 499
V +K V D LF+ V+ P G LPV+++ HGGGF
Sbjct: 42 VVSKDVVLDAGTGLFVRVFLPKVQDQETGKKLPVLVYFHGGGF 84
>05_03_0510 +
14864430-14864792,14865234-14865485,14865573-14865671,
14865789-14866082,14866630-14867010
Length = 462
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Frame = +3
Query: 51 IKHLCNELNK---ILINNSGVNNEF---PTMISAVNEFL---DDLRGGRMSESPLVTVEQ 203
+K LC EL I++ G+N P + V F+ D L+G RM +SP+ ++
Sbjct: 114 LKELCEELRVSGGIILAPEGINGSICGTPEAVEKVLNFIQSDDRLKGLRMIQSPVTPEDE 173
Query: 204 GQLQGRIVNSPSG 242
G SP G
Sbjct: 174 AIHHGHTSQSPVG 186
>10_08_0004 +
14022511-14022670,14022740-14023049,14023193-14023414,
14023497-14023721,14024045-14024119,14024619-14024754,
14025124-14025251,14025337-14025419,14025505-14025626,
14025732-14025810,14026252-14026420,14026562-14026622,
14026729-14026851,14027675-14027914,14028045-14028113,
14028353-14028429,14028527-14028593
Length = 781
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 538 FLVDRDVVVMTINYRCGALGFLSLNTPEVPGNAGIKDI 651
FL + ++ +NYR G+LGF +PGN G +D+
Sbjct: 556 FLYSQGYNLLVVNYR-GSLGFGEEALQSLPGNIGSQDV 592
>07_01_0447 - 3377666-3378673
Length = 335
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +2
Query: 383 PVFAKSYVGDENC-LFLNVYTPSTDGAF---LPVMIWIHGGGF 499
PV K V D L L +Y P+ G LPV+++ HGGGF
Sbjct: 49 PVQWKDVVYDAGRGLRLRMYAPANHGGEEGKLPVLVYFHGGGF 91
>03_02_0423 + 8321076-8322164
Length = 362
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 386 VFAKSYVGDENC-LFLNVYTPSTDGAF--LPVMIWIHGGGFKWGPAIPTC 526
V A+ V D ++ +Y P+ A +PV+++ HGGGF G A +C
Sbjct: 73 VIARDAVVDRATRVWARLYAPAAAAAAGRVPVVVYFHGGGFCVGSAAWSC 122
>01_01_0379 - 2956396-2957409
Length = 337
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 422 LFLNVYTPST--DGAFLPVMIWIHGGGFKWG 508
L L VY P T D LPV++ HGGG+ G
Sbjct: 64 LKLRVYRPPTAGDAERLPVLVCFHGGGYCLG 94
>07_03_1465 - 26729872-26730909
Length = 345
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +2
Query: 422 LFLNVYTPSTDGAF--LPVMIWIHGGGF 499
L+ V+ P T+ A LPV+++ HGGGF
Sbjct: 74 LWARVFCPPTNTAAVKLPVVVYFHGGGF 101
>04_01_0497 - 6522998-6523669,6523684-6523716
Length = 234
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = -3
Query: 267 IPWKRRRPS---RTGCLRSVPGXXXXXXXXXATRTSCHHEDHLGIRS 136
+ W+RRRPS G L SV G + R S ED+ G RS
Sbjct: 10 VAWRRRRPSDPVAAGSLTSVKGRAASILKPYSRRASDKEEDNCGGRS 56
>01_01_0378 - 2953514-2954341,2954388-2954504
Length = 314
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 12/76 (15%)
Frame = +2
Query: 308 APQSPEPWDGIRDATAEGNVCAQIDPVFAKSY---VGDE-NCLFLNVYTPST-------- 451
AP E + G+ ++G+V + V S+ V D + L + VYT T
Sbjct: 9 APHVVEDFYGVVKLLSDGSVVRGDESVLIPSWKDVVYDATHGLRVRVYTSRTAAAAAAGD 68
Query: 452 DGAFLPVMIWIHGGGF 499
DG LPV+++ HGGG+
Sbjct: 69 DGGKLPVLVYFHGGGY 84
>11_06_0703 + 26444128-26446215,26446525-26447226
Length = 929
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 338 CRPRVLEIVGP*IAKNPMGVSHMVFLGNVEGLP-GRAVYDPSLE 210
C R L ++ I K P G+ + FL ++EG P G Y+ ++
Sbjct: 634 CNLRRLGLLDTPINKVPKGIGRLQFLNDLEGFPIGSVTYNKKMQ 677
>11_06_0388 + 23048576-23051546,23051830-23052371,23052444-23052517,
23053006-23053090,23053281-23053367,23053585-23053657,
23053882-23053925,23054041-23054169,23054301-23054402,
23054529-23054585
Length = 1387
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 418 VFIADIGFREDW-IDLSTHVPFRRGIPDAVPGFWRLWGLKSQRTQ 287
V + + F+E+ + + R P+A PG WR+W +RT+
Sbjct: 1052 VILGMVSFQEEQSFEPQGMIKVERVEPNAAPGGWRIWPFSFKRTR 1096
>11_01_0320 -
2406706-2406943,2407297-2407385,2407463-2408335,
2408882-2409310
Length = 542
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +1
Query: 568 TINYRCGALGF-LSLNTP--EVPGNAGIKDIVQAIRWVKDNIHHFGGNAGNLTI 720
T +YRCG G +L TP +P + + +W + H GG G+ +
Sbjct: 212 TYHYRCGKAGDEFTLRTPPARLPVEFVVVGDLGQTKWTASTLSHIGGGGGDYDV 265
>03_05_0487 +
24838620-24838967,24840526-24840747,24840819-24841109,
24841316-24841513,24841641-24841705,24841788-24841874,
24841988-24842108,24842200-24842244,24842321-24842458,
24842571-24842643,24842723-24842799,24842882-24842989,
24843108-24843224,24843524-24843679,24843780-24843881,
24844036-24844161,24844237-24844314,24844390-24844485,
24844592-24844707,24844781-24844850,24844930-24844983,
24845062-24845205,24845297-24845596,24845780-24846202,
24846316-24846429
Length = 1222
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 219 RIVNSPSGKAFYVSKEYHMRNPHW-VLCDLRPHNLQNPGTASGMPRRKGTCVLKSIQSSR 395
R +NSP G+ ++K + N HW ++C G A G+ + V ++ S+
Sbjct: 520 RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPE----GQACGLVKNLALMVYITVGSAA 575
Query: 396 NPM 404
NP+
Sbjct: 576 NPI 578
>01_06_1559 +
38247463-38247499,38247711-38247747,38248181-38248276,
38248671-38248788,38248844-38248878,38249173-38249452,
38249701-38249820,38250369-38250620
Length = 324
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +2
Query: 164 WQDVRVASSHSGARAAPGTDRK---QPVREGLLRFQGIPYAKP 283
W V +H+ +R++ + +K +RE +LR G+P+ P
Sbjct: 74 WAQEAVVQAHAASRSSVCSSKKWVRNTIRESILRRYGLPFVSP 116
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 338 CRPRVLEIVGP*IAKNPMGVSHMVFLGNVEGLP 240
C R L I G I + PMG+ + FL ++EG P
Sbjct: 665 CSLRRLGIDGTPINEVPMGIGGLKFLNDLEGFP 697
>09_04_0417 + 17404433-17405392
Length = 319
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +2
Query: 302 FKAPQSPEPWDGIRDATAEGNVCAQIDPVFAKSYVGDENCLFLNVYTPSTDGAFLPVMIW 481
F +P +DG T++ V V A+ Y+ D L P LP++++
Sbjct: 27 FGTETTPAGFDGATGVTSKDVVIDDATGVSARLYIPD-----LPASGPGHHRKKLPIVVY 81
Query: 482 IHGGG 496
HGGG
Sbjct: 82 FHGGG 86
>07_03_1467 - 26736859-26736868,26737769-26738439
Length = 226
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Frame = +2
Query: 422 LFLNVYTPSTDGAF----LPVMIWIHGGGF 499
L+ V++P++ A LPV+++ HGGGF
Sbjct: 83 LWARVFSPASSSAVESPPLPVVVYFHGGGF 112
>07_03_0776 +
21417476-21417691,21417775-21417855,21417941-21418342,
21418457-21418621,21418729-21419460,21419542-21419748
Length = 600
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 308 APQSPEPWDGIRDATAEGNVCAQIDPVFAK 397
AP+ P P+DG D + G + ID VF K
Sbjct: 565 APEPPYPFDGETDMSVGGGLAELIDWVFDK 594
>06_03_1199 - 28339942-28340703
Length = 253
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -2
Query: 376 LSTHVPFRRGIPDAVPGFWRLWGLKSQRTQWGFRI-WYSLET*KAFPDGLFTIRPWSCPC 200
L HV +RG+PD G W L L T+ + WY++ + G+ ++R +
Sbjct: 144 LELHVQCKRGLPDEDAGVWSL-ELPPATTELELGLYWYAVRPPRVRGPGVTSLRWLALDG 202
Query: 199 STVTRGDSDIL 167
TV R SD L
Sbjct: 203 LTVLR-PSDFL 212
>06_01_0782 -
5848381-5849394,5851143-5851255,5851337-5851440,
5851584-5851660,5851740-5852132,5852267-5852482,
5852826-5852923,5853503-5853637,5853745-5853811,
5853999-5854094,5854555-5854683
Length = 813
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +2
Query: 464 LPVMIWIHGGGFKWG-PAIPT 523
LPV+++ HGGGF G PA P+
Sbjct: 563 LPVVVYFHGGGFVTGSPARPS 583
>04_04_0052 + 22386553-22387506
Length = 317
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = +2
Query: 455 GAFLPVMIWIHGGGFKWG----PAIPTCMDQI 538
G LPV+++ HGGGF G PA C++ +
Sbjct: 73 GERLPVVVYFHGGGFVIGSAASPAYHRCLNDL 104
>01_01_0370 + 2895685-2895717,2895892-2896944
Length = 361
Score = 28.3 bits (60), Expect = 6.8
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 452 DGAFLPVMIWIHGGGF 499
DG LPV+++ HGGG+
Sbjct: 98 DGGKLPVLVYFHGGGY 113
>12_02_0885 +
23994354-23994584,23994987-23995342,23995549-23995663,
23995918-23995962,23996151-23996333,23996802-23996978,
23997345-23997476,23997587-23997766,23999116-23999247,
24000212-24000280,24000377-24000490,24000579-24000806,
24001343-24001486
Length = 701
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +3
Query: 21 LFLSHECSE*IKHLCNELNKILINNSGVNNEFPTMISAVNEFLDDLRGGRMSESPLVTVE 200
+F S CS K CN+L +L++ + + A + F D+L ++E +V+ +
Sbjct: 520 MFNSCFCS--CKMCCNDLQLVLLDEEPDHQYGSRRMPARSRFGDELEAEALAERRIVSAK 577
Query: 201 QGQLQGRIVNSPS 239
+ + I PS
Sbjct: 578 KSSMGRNIPRKPS 590
>08_01_0048 + 335868-336682,338382-340386
Length = 939
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 242 EGLLRFQGIPYAKPPLGSLRFKAPQSPEPWDGIRDA 349
E L + G+P A +GSL P++ E W IRD+
Sbjct: 358 EILKKCSGLPLAIVTVGSLLACRPRTMEEWKSIRDS 393
>07_03_1469 - 26742772-26743848
Length = 358
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Frame = +2
Query: 422 LFLNVYTPSTDG---AFLPVMIWIHGGGFK-WGPAI 517
L+ V+ P+ A +PVM++ HGGGF + PA+
Sbjct: 87 LWARVFAPAAAAQAAAPMPVMVYYHGGGFALFSPAV 122
>04_04_1166 - 31427523-31428154,31428888-31429020
Length = 254
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 399 DFAKTGSI*AHTFPSAVASLMPSQGSGDCGALNRKEPNGG 280
DFA G HT P A L QG+ G + +P GG
Sbjct: 105 DFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGG 144
>03_06_0249 + 32638112-32639140
Length = 342
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +2
Query: 422 LFLNVYTP---STDGAFLPVMIWIHGGGF 499
L L VY P + G LPV+++ HGGG+
Sbjct: 60 LKLRVYRPPAATVAGEKLPVLVYFHGGGY 88
>02_05_0955 - 33056171-33057256
Length = 361
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 452 DGAFLPVMIWIHGGGFKWGPA 514
DG LP+++++HGG F G A
Sbjct: 86 DGRRLPLVVYVHGGAFCTGSA 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,535,005
Number of Sequences: 37544
Number of extensions: 598487
Number of successful extensions: 1606
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1606
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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