Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30416
         (740 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    88   7e-20
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           88   7e-20
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           86   4e-19
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    72   5e-15
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    72   5e-15
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        36   5e-04
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   4.0  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   5.3  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   7.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   7.0  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   7.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   7.0  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.2  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 88.2 bits (209), Expect = 7e-20
 Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
 Frame = +2

Query: 257 FQGIPYAKPPLGSLRFKAPQSPEPWDGIRDATAEGNVCAQID--PVFAKSYV-GDENCLF 427
           ++GIPYA PP+G  RFKAPQ    W G   AT  G  C Q    PV  +  + G E+CL+
Sbjct: 48  YEGIPYALPPVGKFRFKAPQKIPAWIGELSATKFGFPCLQYTQLPVNPRDKIEGAEDCLY 107

Query: 428 LNVYTPS--TDGAFLPVMIWIHGGGFKWGPAIP 520
           LNVY P+  T    LPV+ WIHGG F++G  IP
Sbjct: 108 LNVYVPADRTPSQSLPVIFWIHGGAFQFGSGIP 140



 Score = 86.6 bits (205), Expect = 2e-19
 Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
 Frame = +1

Query: 466 PGHDLDPRWWVQVGT---GNTNLYGPDFLVDRDVVVMTINYRCGALGFLSLNTPEVPGNA 636
           P   L   +W+  G    G+    G  +L+D DV+ +TINYR G LGFLS     VPGN 
Sbjct: 118 PSQSLPVIFWIHGGAFQFGSGIPMGAKYLMDSDVIFVTINYRLGILGFLSTEDEVVPGNM 177

Query: 637 GIKDIVQAIRWVKDNIHHFGGNAGNLTIFGESAG 738
           G+KD   A+RWV +NI  FGGN   +T+ G SAG
Sbjct: 178 GLKDQSMALRWVSENIEWFGGNPKRITLIGLSAG 211


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 88.2 bits (209), Expect = 7e-20
 Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
 Frame = +2

Query: 257 FQGIPYAKPPLGSLRFKAPQSPEPWDGIRDATAEGNVCAQID--PVFAKSYV-GDENCLF 427
           ++GIPYA PP+G  RFKAPQ    W G   AT  G  C Q    PV  +  + G E+CL+
Sbjct: 48  YEGIPYALPPVGKFRFKAPQKIPAWIGELSATKFGFPCLQYTQLPVNPRDKIEGAEDCLY 107

Query: 428 LNVYTPS--TDGAFLPVMIWIHGGGFKWGPAIP 520
           LNVY P+  T    LPV+ WIHGG F++G  IP
Sbjct: 108 LNVYVPADRTPSQSLPVIFWIHGGAFQFGSGIP 140



 Score = 86.6 bits (205), Expect = 2e-19
 Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
 Frame = +1

Query: 466 PGHDLDPRWWVQVGT---GNTNLYGPDFLVDRDVVVMTINYRCGALGFLSLNTPEVPGNA 636
           P   L   +W+  G    G+    G  +L+D DV+ +TINYR G LGFLS     VPGN 
Sbjct: 118 PSQSLPVIFWIHGGAFQFGSGIPMGAKYLMDSDVIFVTINYRLGILGFLSTEDEVVPGNM 177

Query: 637 GIKDIVQAIRWVKDNIHHFGGNAGNLTIFGESAG 738
           G+KD   A+RWV +NI  FGGN   +T+ G SAG
Sbjct: 178 GLKDQSMALRWVSENIEWFGGNPKRITLIGLSAG 211


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 85.8 bits (203), Expect = 4e-19
 Identities = 41/80 (51%), Positives = 52/80 (65%)
 Frame = +1

Query: 499 QVGTGNTNLYGPDFLVDRDVVVMTINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKD 678
           Q+G+G     G  +L+D DV+ +TINYR G LGFLS     VPGN G+KD   A+RWV +
Sbjct: 5   QLGSGTP--MGAKYLMDSDVIFVTINYRLGILGFLSTEDEVVPGNMGLKDQSMALRWVSE 62

Query: 679 NIHHFGGNAGNLTIFGESAG 738
           NI  FGGN   +T+ G SAG
Sbjct: 63  NIEWFGGNPKRITLIGLSAG 82


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 72.1 bits (169), Expect = 5e-15
 Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
 Frame = +1

Query: 505 GTGNTNLYGPDFLV-DRDVVVMTINYRCGALGFLSLN-----TPEVPGNAGIKDIVQAIR 666
           GT   ++Y  D +    +V++ ++ YR GA GFL LN     + E PGN G+ D   A+R
Sbjct: 172 GTATLDVYNADIMAATSNVIIASMQYRVGAFGFLYLNKHFTNSEEAPGNMGLWDQALALR 231

Query: 667 WVKDNIHHFGGNAGNLTIFGESAG 738
           W++DN   FGG+   +TIFGESAG
Sbjct: 232 WLRDNAEAFGGDPELITIFGESAG 255



 Score = 68.1 bits (159), Expect = 8e-14
 Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 27/113 (23%)
 Frame = +2

Query: 257 FQGIPYAKPPLGSLRFKAPQSPEPWDGIRDATAEGNVCAQIDPVFAKSYVGD-------- 412
           F GIP+AKPP+G LRF+ P   EPW G+ +AT   N C Q    +   + G+        
Sbjct: 62  FYGIPFAKPPIGPLRFRKPLPIEPWHGVLNATVLPNSCYQERYEYFPGFPGEEMWNPNTN 121

Query: 413 --ENCLFLNVYTPST-------DGA----------FLPVMIWIHGGGFKWGPA 514
             E+CL+LN++ P         DG+           LP+++WI+GGGF  G A
Sbjct: 122 ISEDCLYLNIWVPQKYRLRHKGDGSPGGNGGPRNGLLPLLVWIYGGGFMSGTA 174


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 72.1 bits (169), Expect = 5e-15
 Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
 Frame = +1

Query: 505 GTGNTNLYGPDFLV-DRDVVVMTINYRCGALGFLSLN-----TPEVPGNAGIKDIVQAIR 666
           GT   ++Y  D +    +V++ ++ YR GA GFL LN     + E PGN G+ D   A+R
Sbjct: 172 GTATLDVYNADIMAATSNVIIASMQYRVGAFGFLYLNKHFTNSEEAPGNMGLWDQALALR 231

Query: 667 WVKDNIHHFGGNAGNLTIFGESAG 738
           W++DN   FGG+   +TIFGESAG
Sbjct: 232 WLRDNAEAFGGDPELITIFGESAG 255



 Score = 68.1 bits (159), Expect = 8e-14
 Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 27/113 (23%)
 Frame = +2

Query: 257 FQGIPYAKPPLGSLRFKAPQSPEPWDGIRDATAEGNVCAQIDPVFAKSYVGD-------- 412
           F GIP+AKPP+G LRF+ P   EPW G+ +AT   N C Q    +   + G+        
Sbjct: 62  FYGIPFAKPPIGPLRFRKPLPIEPWHGVLNATVLPNSCYQERYEYFPGFPGEEMWNPNTN 121

Query: 413 --ENCLFLNVYTPST-------DGA----------FLPVMIWIHGGGFKWGPA 514
             E+CL+LN++ P         DG+           LP+++WI+GGGF  G A
Sbjct: 122 ISEDCLYLNIWVPQKYRLRHKGDGSPGGNGGPRNGLLPLLVWIYGGGFMSGTA 174


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 35.5 bits (78), Expect = 5e-04
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +1

Query: 505 GTGNTNLYGPDFLVDRDVVVMTINYRCGALG 597
           GT + +   PD+L+ +DVVV++ NYR GA G
Sbjct: 32  GTSSFHEMRPDYLLPKDVVVVSSNYRVGAFG 62



 Score = 34.3 bits (75), Expect = 0.001
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +2

Query: 413 ENCLFLNVYTPSTDGAFLPVMIWIHGGGF 499
           E+CL+L+VYT S D +  PVM ++H G F
Sbjct: 2   EDCLYLDVYTNSLDQS-KPVMFYVHEGAF 29


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 365  VCAQIDPVFAKSYVGDENCLF 427
            +C   D      +VG +NCLF
Sbjct: 1597 LCGNFDHDSTNDFVGPKNCLF 1617



 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 535 DFLVDRDVVVMTINYRCGALGFLSLNT 615
           D +VDRDV    +N     +G L ++T
Sbjct: 118 DLIVDRDVPTWEVNILKSIVGQLQVDT 144


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +1

Query: 466 PGHDLDPRWWVQVGTGNTN 522
           P H  D   W Q+   NTN
Sbjct: 120 PNHTSDQHKWFQMSINNTN 138


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 124 IVGNSLFTPELLIKILFNSLHRCFIHSL 41
           IVGN+L    ++      S+  CF+ SL
Sbjct: 52  IVGNTLVIAAVITTRRLRSVTNCFVSSL 79


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 309 PHNLQNPGTASGMPRRKGTCVLKSIQSSRNPMSAM 413
           P  L+ PGT   + RR+G  +  S+ S   P+  M
Sbjct: 179 PEELE-PGTPCQLTRRQGYVIYSSLGSFFIPLLLM 212


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 309 PHNLQNPGTASGMPRRKGTCVLKSIQSSRNPMSAM 413
           P  L+ PGT   + RR+G  +  S+ S   P+  M
Sbjct: 179 PEELE-PGTPCQLTRRQGYVIYSSLGSFFIPLLLM 212


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +2

Query: 674 KIISITSVVMPVI*QYLV 727
           KI+  TS+V+P+I +YL+
Sbjct: 284 KILPPTSLVLPLIAKYLL 301


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 309 PHNLQNPGTASGMPRRKGTCVLKSIQSSRNPMSAM 413
           P  L+ PGT   + RR+G  +  S+ S   P+  M
Sbjct: 179 PEELE-PGTPCQLTRRQGYVIYSSLGSFFIPLLLM 212


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 125 DIGRERIPR*SSWWQDVRVASSHSGARAAP 214
           D+G+      + WW+D+ + +  + A  AP
Sbjct: 329 DLGKLGEEEKADWWKDIMLLNEKTLAVPAP 358


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 125 DIGRERIPR*SSWWQDVRVASSHSGARAAP 214
           D+G+      + WW+D+ + +  + A  AP
Sbjct: 329 DLGKLGEEEKADWWKDIMLLNEKTLAVPAP 358


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 125 DIGRERIPR*SSWWQDVRVASSHSGARAAP 214
           D+G+      + WW+D+ + +  + A  AP
Sbjct: 329 DLGKLGEEEKADWWKDIMLLNEKTLAVPAP 358


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,018
Number of Sequences: 438
Number of extensions: 5750
Number of successful extensions: 38
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)