Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30414
(726 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_41667| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_25038| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_51044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_37238| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 29 3.8
SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041) 29 3.8
SB_193| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 29 3.8
SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_35625| Best HMM Match : DUF296 (HMM E-Value=0.0053) 29 5.1
SB_35377| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 29 5.1
SB_13566| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_52802| Best HMM Match : Tropomodulin (HMM E-Value=0.11) 29 5.1
SB_25887| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 29 5.1
SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 29 5.1
SB_35466| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_8812| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_47507| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_42096| Best HMM Match : ShTK (HMM E-Value=3.5e-05) 28 8.9
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 623 ADRNEGHADVCEHFSCKMAPTSVALNVGGGPS 718
A RNEG+ +CE FSC P S + G P+
Sbjct: 1686 AVRNEGNCGLCEGFSCDSVPYSRCTIINGSPT 1717
>SB_41667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 31.1 bits (67), Expect = 0.95
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 269 DGAVASDRFSALIVQNVGP*DVYY*AQIGQKAETKQTHSSVGKDA 135
D V R SA +VQ V P +Y A I ++ + +H S+G D+
Sbjct: 11 DSTVVLSRLSAHVVQAVEPVGRWYEAYITRRQHSTSSHHSLGSDS 55
>SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 546 PKQSTVRFTNPSVSKPVTSKSLGGT-MPTVTKATPMSVSTSLA 671
P ST T+P SKPV + SL T + T A+P+ V+TSLA
Sbjct: 121 PTVSTPVKTHPLASKPVVTTSLASTPVDTTLTASPV-VTTSLA 162
>SB_25038| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1643
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Frame = +1
Query: 298 STQEMAAAFQNYLP----VLNDSMLSQQTAA--ALSLSYLSNMSALAGYSLQNSLHNSL 456
S++ + +F NYL +LN+++++ +T A ALS ++ S L+ +QN +HN L
Sbjct: 843 SSRSFSRSFDNYLGQILRILNENVVAIRTKAMKALSAVVCADPSILSREDMQNGVHNRL 901
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +3
Query: 417 SRLQPTEFVTQFPSEFLSSGILQTVSREQFLSYLPPVKKQKRGPKQSTVRFTNPSVSKPV 596
S QPT TQ + L S Q + +Q + LP K Q P+ +T F PS +P
Sbjct: 231 STKQPT--TTQQTTTTLPS-TKQPTTTQQTTTTLPSTK-QPTTPQLTTTTF--PSTKQPT 284
Query: 597 TSKSLGGTMPTVTKATPMSVSTS 665
T++ T+P+ + T +T+
Sbjct: 285 TTQQTTATLPSTKQPTTTQQTTA 307
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 522 PVKKQKRGPKQSTVRFTNPSVSKPVTSKSLGGTMPT-VTKATPMSVST 662
P KQ +Q+T T PS +P T++ T+PT TK T +S +T
Sbjct: 278 PSTKQPTTTQQTTA--TLPSTKQPTTTQQTTATLPTPSTKPTTVSPTT 323
>SB_51044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/85 (23%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 423 LQPTEFVTQFPSEFLSSGILQTVSREQFLSYLPPVKKQ-KRGPKQSTVRFTNPSVSKPVT 599
++ ++ V+Q S+ +S + Q+VS+ S V + + QS + + SVS+ V+
Sbjct: 318 IEASQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQSVS 377
Query: 600 SKSLGGTMPTVTKATPMSVSTSLAK 674
+ +V+++ SVS S+++
Sbjct: 378 QLASQSVSQSVSQSVSQSVSQSVSQ 402
>SB_37238| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1003
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 382 LSLSYLSNMSALAGYSLQNSLHNSLQNSF 468
LSL L M+ALAG +L L NSLQ +F
Sbjct: 946 LSLPKLELMAALAGANLAEYLPNSLQKNF 974
>SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1535
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 261 GTVHVRIRAAKDVHSGNGSRLPKLSTRVERLNAVATDCGGTIFIIFE*HERSSRLQP 431
GT IR+ +D++SG+ SR ++ R +LN D +F + H SS + P
Sbjct: 619 GTSSKNIRSFRDIYSGDLSRTDDVTQRRGKLNKDYVDSSHNVFKKY--HSVSSLIPP 673
>SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041)
Length = 754
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 456 SEFLSSGILQTVSREQFLSYLPPVKKQKRGPKQSTVRFTNPSVSKPVTSKSLGGTMPTVT 635
++F+S G+LQ V+R +Y+ +K+ KR R + V K L PT
Sbjct: 666 ADFISPGLLQHVNRHDVDTYIHRIKQGKRHAPGPQSRQSAKVVKTSTPKKQL---KPTSR 722
Query: 636 KATPMSVS 659
K+ +S+S
Sbjct: 723 KSPLVSIS 730
>SB_193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1816
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 382 LSLSYLSNMSALAGYSLQNSLHNSLQNSF 468
LSL L M+ALAG +L L NSLQ +F
Sbjct: 1296 LSLPKLELMAALAGANLAEYLPNSLQKNF 1324
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -3
Query: 232 LFKMSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRH--WRRTKLKL 71
LF K + K + L + R IP R G +RY KRRH +++ K+K+
Sbjct: 596 LFGKKVRKPVRLLTKYCRLLFRGRKIPLRKGKRGGLVVRYRKKRRHLSFKQGKVKM 651
>SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 570 TNPSVSKPVTSKSLGGTMPTVTKATPMSVSTSLA 671
T + + P T+ S T T TKAT SVST+ A
Sbjct: 234 TTAAETTPTTTTSASTTTATTTKATTTSVSTTTA 267
>SB_35625| Best HMM Match : DUF296 (HMM E-Value=0.0053)
Length = 885
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 229 TIKAENRSEATAPSTSASGLPKMSTQEMAAAFQNYLPVLNDSMLSQQTAAALSLSYLSNM 408
T + S T+P TSAS +P +++ + + P L S S T++ S +
Sbjct: 338 TTETSGTSAKTSPVTSASEMPVVTSSGSRSVTPSVTPSLTSSESSAVTSSMTSSVIMKQD 397
Query: 409 SALA 420
S+LA
Sbjct: 398 SSLA 401
>SB_35377| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1400
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 382 LSLSYLSNMSALAGYSLQNSLHNSLQNSF 468
LSL L M+ALAG +L L NSLQ +F
Sbjct: 902 LSLPRLELMAALAGANLAEYLLNSLQKNF 930
>SB_13566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 382 LSLSYLSNMSALAGYSLQNSLHNSLQNSF 468
LSL L M+ALAG +L L NSLQ +F
Sbjct: 762 LSLPRLELMAALAGANLAEYLLNSLQKNF 790
>SB_52802| Best HMM Match : Tropomodulin (HMM E-Value=0.11)
Length = 768
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 364 QQTAAALSLSYLSNMSALAGYSLQNSLHNSLQNSFQAEFYRQFLENSFCRIYRQ*RNRNG 543
++ A SL+ +S G+ + H ++ F+ + ++ FC +Y R R G
Sbjct: 164 RKNAVTFSLTKVSEDLKRVGFLKRQKPHCGIRPVEMFSFFHKSFQDYFCAVYLARRLRQG 223
Query: 544 D-RNSLRSDLPTLQCRN 591
D L D +C N
Sbjct: 224 DVEPELIGDTRLFECVN 240
>SB_25887| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1378
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 382 LSLSYLSNMSALAGYSLQNSLHNSLQNSF 468
LSL L M+ALAG +L L NSLQ +F
Sbjct: 849 LSLPRLELMAALAGANLAEYLLNSLQKNF 877
>SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 528 KKQKRGPKQSTVRFTNPSVSKPVTSKSLGGTMPTVTKAT 644
KK+ RG Q TV + +KPVT + + T P+V T
Sbjct: 396 KKETRGIDQFTVPLSQIKETKPVTPRRVPLTSPSVPSGT 434
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +2
Query: 218 RHFEQSRPKIDQKQRHRPRPHQGCQRCPLRKWQPPSKIIYPC*TTQCCRNRLRRH 382
RH RP++ HRP H C R L PS+ ++ +RL RH
Sbjct: 230 RHLHCHRPRLSN--HHRPSRHHHCHRPRLSNHHRPSRHLHCHCPRLSNHHRLSRH 282
>SB_35466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 514 YDRNCSLETVCRIPLERN 461
YD+ C+LE VC +P++ N
Sbjct: 393 YDKECTLEHVCYVPVQLN 410
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -3
Query: 295 SLAALMRTWTVPLLLIDFRP*LFKMSAHKTFIIKRKLAKKLKQNRPI 155
S A +R+W VP+ +DF P L + F+++ ++ +L++ P+
Sbjct: 1040 SCAFGVRSWQVPVQELDFPPGLERYKWFARFLLEGQVVPRLQKFTPL 1086
>SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 212 MGRHFEQSRPKIDQKQRHRPRPHQGCQRCPLRKWQPPSK 328
+ RH+ +RP K PRPH C L W+ P++
Sbjct: 602 VSRHW-WNRPTKPPKPTRPPRPHHRALVCELHYWECPAE 639
>SB_8812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 519 PPVKKQKRGPKQSTVRFTNPSVSKPVTSKSLGGTMPTVTKATP 647
PP +++ R + NP KP+T+ + G + + ATP
Sbjct: 536 PPSQEKNRSKTRKNTLGLNPCTRKPLTNNRIRGRVNSERAATP 578
>SB_47507| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = +3
Query: 417 SRLQPTEFVTQFPSE-FLSSGILQTVSREQFLSYLPPVKKQKRGPKQSTVRFTNPSVSKP 593
S L FV S+ F SS + + ++ +++ R +S +F S+ KP
Sbjct: 136 SSLIKRRFVEDVGSDLFFSSHLFGGMEDRPSSEFMEAIREVMREEIRSFAQFPAASIEKP 195
Query: 594 VTS------KSLGGTMP-TVTKATPMS 653
+TS +GG P + T+ATP++
Sbjct: 196 ITSSPGRDENGVGGDFPASGTRATPVT 222
>SB_42096| Best HMM Match : ShTK (HMM E-Value=3.5e-05)
Length = 64
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +2
Query: 266 RPRP-HQGCQRCPLRKWQPPSKIIYPC*TTQCCRNRLRRHY 385
RPRP H+GC RC + + Y C T Q R Y
Sbjct: 14 RPRPNHRGCSRCSDKYPHTCRQFSYSCITGQFYRRDFMEKY 54
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,651,172
Number of Sequences: 59808
Number of extensions: 440905
Number of successful extensions: 1382
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1379
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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