Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30414
(726 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57846-1|AAB02265.1| 51|Homo sapiens ribosomal protein L39 pro... 95 2e-19
D79205-1|BAA11465.1| 51|Homo sapiens ribosomal protein L39 pro... 95 2e-19
BC070205-1|AAH70205.1| 51|Homo sapiens ribosomal protein L39 p... 95 2e-19
BC001019-1|AAH01019.1| 51|Homo sapiens ribosomal protein L39 p... 95 2e-19
AB061835-1|BAB79473.1| 51|Homo sapiens ribosomal protein L39 p... 95 2e-19
AB209077-1|BAD92314.1| 70|Homo sapiens ribosomal protein L39 v... 93 1e-18
L05096-1|AAC15859.1| 51|Homo sapiens ribosomal protein L39 pro... 90 6e-18
BC012328-1|AAH12328.1| 51|Homo sapiens ribosomal protein L39-l... 90 6e-18
AF548529-1|AAN52397.1| 51|Homo sapiens ribosomal protein L39-2... 90 6e-18
AB063610-1|BAC19837.1| 51|Homo sapiens ribosomal protein L39-l... 90 6e-18
AB063607-1|BAC19834.1| 29|Homo sapiens ribosomal protein L39-l... 54 5e-07
AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein. 34 0.45
AK092888-1|BAC03997.1| 218|Homo sapiens protein ( Homo sapiens ... 33 0.79
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 33 1.0
DQ355971-1|ABC67469.1| 1711|Homo sapiens CDC42 binding protein k... 32 1.8
AF128625-1|AAD37506.1| 1711|Homo sapiens CDC42-binding protein k... 32 1.8
AB032950-1|BAA86438.2| 1760|Homo sapiens KIAA1124 protein protein. 32 1.8
Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein. 30 9.7
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 30 9.7
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 30 9.7
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 30 9.7
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 30 9.7
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 9.7
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 30 9.7
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 30 9.7
>U57846-1|AAB02265.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 95.5 bits (227), Expect = 2e-19
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -3
Query: 223 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 71
MS+HKTF IKR LAKK KQNRPIPQW+RM+TGN IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL 51
>D79205-1|BAA11465.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 95.5 bits (227), Expect = 2e-19
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -3
Query: 223 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 71
MS+HKTF IKR LAKK KQNRPIPQW+RM+TGN IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL 51
>BC070205-1|AAH70205.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 95.5 bits (227), Expect = 2e-19
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -3
Query: 223 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 71
MS+HKTF IKR LAKK KQNRPIPQW+RM+TGN IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL 51
>BC001019-1|AAH01019.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 95.5 bits (227), Expect = 2e-19
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -3
Query: 223 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 71
MS+HKTF IKR LAKK KQNRPIPQW+RM+TGN IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL 51
>AB061835-1|BAB79473.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 95.5 bits (227), Expect = 2e-19
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -3
Query: 223 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 71
MS+HKTF IKR LAKK KQNRPIPQW+RM+TGN IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL 51
>AB209077-1|BAD92314.1| 70|Homo sapiens ribosomal protein L39
variant protein.
Length = 70
Score = 92.7 bits (220), Expect = 1e-18
Identities = 40/51 (78%), Positives = 46/51 (90%)
Frame = -3
Query: 223 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 71
MS+HKTF IK+ LAKK KQNRPIPQW+RM+TGN IRYN+KRRHW+RTKL L
Sbjct: 20 MSSHKTFKIKQFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWKRTKLGL 70
>L05096-1|AAC15859.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 90.2 bits (214), Expect = 6e-18
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -3
Query: 223 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 71
MS+HKTF IKR LAKK KQNRPIPQW++M+ G+ IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLGL 51
>BC012328-1|AAH12328.1| 51|Homo sapiens ribosomal protein L39-like
protein.
Length = 51
Score = 90.2 bits (214), Expect = 6e-18
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -3
Query: 223 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 71
MS+HKTF IKR LAKK KQNRPIPQW++M+ G+ IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLGL 51
>AF548529-1|AAN52397.1| 51|Homo sapiens ribosomal protein L39-2
protein.
Length = 51
Score = 90.2 bits (214), Expect = 6e-18
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -3
Query: 223 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 71
MS+HKTF IKR LAKK KQNRPIPQW++M+ G+ IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLGL 51
>AB063610-1|BAC19837.1| 51|Homo sapiens ribosomal protein L39-like
protein.
Length = 51
Score = 90.2 bits (214), Expect = 6e-18
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -3
Query: 223 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 71
MS+HKTF IKR LAKK KQNRPIPQW++M+ G+ IRYN+KRRHWRRTKL L
Sbjct: 1 MSSHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLGL 51
>AB063607-1|BAC19834.1| 29|Homo sapiens ribosomal protein L39-like
protein.
Length = 29
Score = 54.0 bits (124), Expect = 5e-07
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -3
Query: 223 MSAHKTFIIKRKLAKKLKQNRPIPQWVRM 137
MS+HKTF IKR LAKK KQNRPIPQW++M
Sbjct: 1 MSSHKTFTIKRFLAKKQKQNRPIPQWIQM 29
>AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein.
Length = 589
Score = 34.3 bits (75), Expect = 0.45
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3
Query: 555 STVRFTNPSVSKPVTSKSLGGTMPTVTKATPMSVSTSL 668
ST+ FT + + +TS SLG TM T T TP +VSTS+
Sbjct: 152 STIYFTASTYTSAMTSVSLG-TMVTSTSMTPSTVSTSI 188
>AK092888-1|BAC03997.1| 218|Homo sapiens protein ( Homo sapiens
cDNA FLJ35569 fis, clone SPLEN2005783. ).
Length = 218
Score = 33.5 bits (73), Expect = 0.79
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = -3
Query: 478 IPLERNSE-GNCVTNSVGCNRLE-RSCYSNMIKIVPPQSVATALSRSTRV 335
IP+ + +E GNC+ N VG +E RSC+ + P+SV+ S++TR+
Sbjct: 167 IPVTQEAEAGNCL-NPVGGGCIEPRSCHCTPAWVTEPESVSNYTSKTTRI 215
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 33.1 bits (72), Expect = 1.0
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 205 TSYGPTF*TIKAENRSEATAPSTSASGLPKMSTQEMAAAFQNYLPVLNDSMLSQQTAAAL 384
T+ GPT T A S +AP+TS + P ST ++A+ + + S +S T++
Sbjct: 1121 TTSGPTTSTTLAPTTSTTSAPTTSTNSAPTTST--ISASTTSTISAPTTSTISSPTSSTT 1178
Query: 385 SLSYLSNMSALAGYSLQNS 441
S S SA + S
Sbjct: 1179 STPQTSKTSAATSSTTSGS 1197
Score = 30.7 bits (66), Expect = 5.6
Identities = 21/66 (31%), Positives = 26/66 (39%)
Frame = +1
Query: 205 TSYGPTF*TIKAENRSEATAPSTSASGLPKMSTQEMAAAFQNYLPVLNDSMLSQQTAAAL 384
TS PT T A S +AP+TS P ST A P S + T +A
Sbjct: 696 TSSAPTSSTTSAPTTSTISAPTTSTISAPTTSTTSAPTASTTSAPTSTSSAPTTNTTSAP 755
Query: 385 SLSYLS 402
+ S S
Sbjct: 756 TTSTTS 761
Score = 30.3 bits (65), Expect = 7.3
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +1
Query: 205 TSYGPTF*TIKAENRSEATAPSTSASGLPKMSTQEMAAAFQNYLPVLNDSMLSQQTAAAL 384
T+ PT T A S +AP+TS + P+ +T + P S +S T + +
Sbjct: 664 TTSAPTTSTTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAP--TTSTISAPTTSTI 721
Query: 385 SLSYLSNMSA 414
S S SA
Sbjct: 722 SAPTTSTTSA 731
>DQ355971-1|ABC67469.1| 1711|Homo sapiens CDC42 binding protein kinase
beta (DMPK-like) protein.
Length = 1711
Score = 32.3 bits (70), Expect = 1.8
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 507 LSYLPPVKKQKRGPKQSTVRFTNPSVSKPVTS-KSLGGTMPTVT 635
LS +PP ++++ GP + + PS +KP S S GG+ P+VT
Sbjct: 1609 LSAVPPSQEERPGPAPTNLARQPPSRNKPYISWPSSGGSEPSVT 1652
>AF128625-1|AAD37506.1| 1711|Homo sapiens CDC42-binding protein kinase
beta protein.
Length = 1711
Score = 32.3 bits (70), Expect = 1.8
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 507 LSYLPPVKKQKRGPKQSTVRFTNPSVSKPVTS-KSLGGTMPTVT 635
LS +PP ++++ GP + + PS +KP S S GG+ P+VT
Sbjct: 1609 LSAVPPSQEERPGPAPTNLARQPPSRNKPYISWPSSGGSEPSVT 1652
>AB032950-1|BAA86438.2| 1760|Homo sapiens KIAA1124 protein protein.
Length = 1760
Score = 32.3 bits (70), Expect = 1.8
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 507 LSYLPPVKKQKRGPKQSTVRFTNPSVSKPVTS-KSLGGTMPTVT 635
LS +PP ++++ GP + + PS +KP S S GG+ P+VT
Sbjct: 1658 LSAVPPSQEERPGPAPTNLARQPPSRNKPYISWPSSGGSEPSVT 1701
>Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein.
Length = 477
Score = 29.9 bits (64), Expect = 9.7
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 205 TSYGPTF*TIKAENRSEATAPSTSASGLPKMSTQEMAAAFQNYLPVLNDSMLSQ--QTAA 378
T+ PT TI A S +AP+TS + P ST P + + Q +T+A
Sbjct: 214 TTSAPTSSTISARTTSIISAPTTSTTSFPTTSTTSATTTSTTSAPTSSTTSTPQTSKTSA 273
Query: 379 ALS 387
A S
Sbjct: 274 ATS 276
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 29.9 bits (64), Expect = 9.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 507 LSYLPPVKKQKRGPKQSTVRFTNPSVSKPVTSKSLGGTMPTVTKATPMSVST 662
L+ +P + ST+ T S PVT+ + G + PT + T M +ST
Sbjct: 2871 LTSIPVSTTPVASSEASTLSTTPVDTSIPVTTSTEGSSSPTTAEGTSMPIST 2922
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 29.9 bits (64), Expect = 9.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 507 LSYLPPVKKQKRGPKQSTVRFTNPSVSKPVTSKSLGGTMPTVTKATPMSVST 662
L+ +P + ST+ T S PVT+ + G + PT + T M +ST
Sbjct: 2871 LTSIPVSTTPVASSEASTLSTTPVDTSIPVTTSTEGSSSPTTAEGTSMPIST 2922
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 29.9 bits (64), Expect = 9.7
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3
Query: 489 VSREQFLSYLPPVKKQKRGPKQSTVRFTNPSVSKPVTSKSLGGTMPTVTKATPMSVSTSL 668
VSR + S PPV +++ + T R + S + PVT + P VT+ S ++ +
Sbjct: 1918 VSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPI 1977
Query: 669 AK 674
+
Sbjct: 1978 TR 1979
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 29.9 bits (64), Expect = 9.7
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3
Query: 489 VSREQFLSYLPPVKKQKRGPKQSTVRFTNPSVSKPVTSKSLGGTMPTVTKATPMSVSTSL 668
VSR + S PPV +++ + T R + S + PVT + P VT+ S ++ +
Sbjct: 950 VSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPI 1009
Query: 669 AK 674
+
Sbjct: 1010 TR 1011
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 29.9 bits (64), Expect = 9.7
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3
Query: 489 VSREQFLSYLPPVKKQKRGPKQSTVRFTNPSVSKPVTSKSLGGTMPTVTKATPMSVSTSL 668
VSR + S PPV +++ + T R + S + PVT + P VT+ S ++ +
Sbjct: 1918 VSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPI 1977
Query: 669 AK 674
+
Sbjct: 1978 TR 1979
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 29.9 bits (64), Expect = 9.7
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3
Query: 489 VSREQFLSYLPPVKKQKRGPKQSTVRFTNPSVSKPVTSKSLGGTMPTVTKATPMSVSTSL 668
VSR + S PPV +++ + T R + S + PVT + P VT+ S ++ +
Sbjct: 441 VSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPI 500
Query: 669 AK 674
+
Sbjct: 501 TR 502
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 29.9 bits (64), Expect = 9.7
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3
Query: 489 VSREQFLSYLPPVKKQKRGPKQSTVRFTNPSVSKPVTSKSLGGTMPTVTKATPMSVSTSL 668
VSR + S PPV +++ + T R + S + PVT + P VT+ S ++ +
Sbjct: 1966 VSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPI 2025
Query: 669 AK 674
+
Sbjct: 2026 TR 2027
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,712,446
Number of Sequences: 237096
Number of extensions: 2061805
Number of successful extensions: 6004
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5980
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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