Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30414
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53148-4|AAB37070.1| 51|Caenorhabditis elegans Ribosomal prote... 94 8e-20
AF303271-1|AAG50229.1| 51|Caenorhabditis elegans ribosomal pro... 94 8e-20
AY714241-1|AAV68307.1| 529|Caenorhabditis elegans SPD-1 protein. 33 0.16
AC024756-3|AAT81176.1| 529|Caenorhabditis elegans Spindle defec... 33 0.16
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 0.84
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 30 1.5
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 30 1.5
U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical pr... 30 1.9
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 29 2.6
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p... 29 3.4
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p... 29 3.4
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 5.9
U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12 transcrip... 28 5.9
AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical ... 28 5.9
AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical ... 28 5.9
AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical ... 28 5.9
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z35597-2|CAA84649.2| 254|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF039037-4|AAC48229.3| 311|Caenorhabditis elegans Protein kinas... 28 7.8
>U53148-4|AAB37070.1| 51|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 39 protein.
Length = 51
Score = 94.3 bits (224), Expect = 8e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -3
Query: 223 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 71
MSA K IKRKLAKK KQNRP+PQWVRM+TGNT++YNAKRRHWRRTKLKL
Sbjct: 1 MSALKKSFIKRKLAKKQKQNRPMPQWVRMKTGNTMKYNAKRRHWRRTKLKL 51
>AF303271-1|AAG50229.1| 51|Caenorhabditis elegans ribosomal
protein L39 protein.
Length = 51
Score = 94.3 bits (224), Expect = 8e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -3
Query: 223 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 71
MSA K IKRKLAKK KQNRP+PQWVRM+TGNT++YNAKRRHWRRTKLKL
Sbjct: 1 MSALKKSFIKRKLAKKQKQNRPMPQWVRMKTGNTMKYNAKRRHWRRTKLKL 51
>AY714241-1|AAV68307.1| 529|Caenorhabditis elegans SPD-1 protein.
Length = 529
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 501 QFLSYLPPVKKQKRGPKQSTVRFTNPSVSKPVTSKSLGGTMPTVTKA-TPMSVSTS 665
+ +S++ P ++Q GPK S+ + T PS TS S T P +A TP S+++S
Sbjct: 463 EMISFITPTRRQAVGPKTSSPKDTQPS-----TSSSSRTTTPMSKRAMTPSSIASS 513
>AC024756-3|AAT81176.1| 529|Caenorhabditis elegans Spindle
defective protein 1 protein.
Length = 529
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 501 QFLSYLPPVKKQKRGPKQSTVRFTNPSVSKPVTSKSLGGTMPTVTKA-TPMSVSTS 665
+ +S++ P ++Q GPK S+ + T PS TS S T P +A TP S+++S
Sbjct: 463 EMISFITPTRRQAVGPKTSSPKDTQPS-----TSSSSRTTTPMSKRAMTPSSIASS 513
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.1 bits (67), Expect = 0.84
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +3
Query: 408 ERSSRLQPTEFVTQFPSEFLSSGILQTVSREQF---LSYLPPVKKQKRGPKQSTVRFTNP 578
+R R + + ++ + +L+ V +QF S P +++ KR +T +T
Sbjct: 213 KRPYRSEKSTAISDSQGVYYDGQVLKGVRAKQFSMRTSGSPTLRRMKRDAGDNTCDYTIE 272
Query: 579 SVSKPVTSKSLGGTMPTVTKATPMSVSTS 665
S S T+ + TVT T + STS
Sbjct: 273 STSTSTTTPTTTTVTSTVTSTTTVPTSTS 301
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.1 bits (67), Expect = 0.84
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +3
Query: 408 ERSSRLQPTEFVTQFPSEFLSSGILQTVSREQF---LSYLPPVKKQKRGPKQSTVRFTNP 578
+R R + + ++ + +L+ V +QF S P +++ KR +T +T
Sbjct: 213 KRPYRSEKSTAISDSQGVYYDGQVLKGVRAKQFSMRTSGSPTLRRMKRDAGDNTCDYTIE 272
Query: 579 SVSKPVTSKSLGGTMPTVTKATPMSVSTS 665
S S T+ + TVT T + STS
Sbjct: 273 STSTSTTTPTTTTVTSTVTSTTTVPTSTS 301
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 265 PSTSASGLPKMSTQEMAAAFQNYLPVLNDSMLSQQTAAALSLSYLSNMS 411
P+ + +P+M+ Q++ A P+L S LS + + S++ LS+ S
Sbjct: 1393 PAAAVQPMPQMTAQQVPAHGAQETPILKSSELSSSASTSSSITELSDPS 1441
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 265 PSTSASGLPKMSTQEMAAAFQNYLPVLNDSMLSQQTAAALSLSYLSNMS 411
P+ + +P+M+ Q++ A P+L S LS + + S++ LS+ S
Sbjct: 1413 PAAAVQPMPQMTAQQVPAHGAQETPILKSSELSSSASTSSSITELSDPS 1461
>U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical
protein ZK1193.2 protein.
Length = 1250
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 228 NNQGRKSIRSNGTVHVRIRAAKDVHSGNGSRLPKLSTRVERL 353
N Q SIRS TV V R ++H G P +T + RL
Sbjct: 414 NGQCSISIRSQSTVQVATRFTTNIHDDVGKEEPNKNTDMNRL 455
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 519 PPVKKQKRGPKQSTVRFTNPSVSKPVTSKSLGGTMPTVTKATPMSVSTSLAK 674
PP + P +T R+ P+ +P T ++ + T T A P + + A+
Sbjct: 246 PPRTRPYVAPSTTTQRYIEPTTQRPTTRRATTKRITTTTTAAPTTPRLTTAR 297
>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = +3
Query: 480 LQTVSREQFLSYLPPVKK---QKRGPKQSTVRFTNPSVSKP-----VTSKSLGGTMPTVT 635
L +S+ + L Y P+ K ++ P Q TV F NP+ +P V + LGG+ T T
Sbjct: 1115 LAVLSKRRELPY--PIGKFIGRRNDPNQPTVAFENPAYGEPWGGAEVEIRGLGGSATTGT 1172
Query: 636 KATPMS 653
A S
Sbjct: 1173 AAATQS 1178
>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical protein
T04A11.3 protein.
Length = 1014
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = +3
Query: 480 LQTVSREQFLSYLPPVKK---QKRGPKQSTVRFTNPSVSKP-----VTSKSLGGTMPTVT 635
L +S+ + L Y P+ K ++ P Q TV F NP+ +P V + LGG+ T T
Sbjct: 921 LAVLSKRRELPY--PIGKFIGRRNDPNQPTVAFENPAYGEPWGGAEVEIRGLGGSATTGT 978
Query: 636 KATPMS 653
A S
Sbjct: 979 AAATQS 984
>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = +3
Query: 480 LQTVSREQFLSYLPPVKK---QKRGPKQSTVRFTNPSVSKP-----VTSKSLGGTMPTVT 635
L +S+ + L Y P+ K ++ P Q TV F NP+ +P V + LGG+ T T
Sbjct: 1115 LAVLSKRRELPY--PIGKFIGRRNDPNQPTVAFENPAYGEPWGGAEVEIRGLGGSATTGT 1172
Query: 636 KATPMS 653
A S
Sbjct: 1173 AAATQS 1178
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/84 (28%), Positives = 36/84 (42%)
Frame = +3
Query: 414 SSRLQPTEFVTQFPSEFLSSGILQTVSREQFLSYLPPVKKQKRGPKQSTVRFTNPSVSKP 593
SS + T TQ P+ S+GI TVS Q S P+ + + +T+ P
Sbjct: 332 SSVIPTTTQTTQRPT---STGIPSTVSTSQGTSSTSPIPSTTQTSSSAPSTYTSNFTPSP 388
Query: 594 VTSKSLGGTMPTVTKATPMSVSTS 665
T+ L T+ T+ P S +S
Sbjct: 389 TTT-LLTSTIAPSTQGVPTSSKSS 411
>U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12
transcriptional activator protein.
Length = 515
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 227 EQSRPKIDQKQRHRPRP--HQGCQRCPLRKWQPPSKIIYP 340
++ +P+ Q+QR PRP HQ P QPP + +P
Sbjct: 250 QEQQPQEQQRQRFWPRPMMHQQQWERPTVWQQPPQQFFFP 289
>AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical
protein Y79H2A.1b protein.
Length = 466
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 227 EQSRPKIDQKQRHRPRP--HQGCQRCPLRKWQPPSKIIYP 340
++ +P+ Q+QR PRP HQ P QPP + +P
Sbjct: 201 QEQQPQEQQRQRFWPRPMMHQQQWERPTVWQQPPQQFFFP 240
>AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical
protein Y79H2A.1a protein.
Length = 552
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 227 EQSRPKIDQKQRHRPRP--HQGCQRCPLRKWQPPSKIIYP 340
++ +P+ Q+QR PRP HQ P QPP + +P
Sbjct: 287 QEQQPQEQQRQRFWPRPMMHQQQWERPTVWQQPPQQFFFP 326
>AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical
protein C51G7.4 protein.
Length = 579
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 227 EQSRPKIDQKQRHRPRP--HQGCQRCPLRKWQPPSKIIYP 340
++ +P+ Q+QR PRP HQ P QPP + +P
Sbjct: 314 QEQQPQEQQRQRFWPRPMMHQQQWERPTVWQQPPQQFFFP 353
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 546 PKQSTVRFTNPSVSKPVTSKSLGGTMPTVTKATPMSVSTS 665
PK ST T + + T+ + T PT T TP + +T+
Sbjct: 83 PKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTT 122
>Z35597-2|CAA84649.2| 254|Caenorhabditis elegans Hypothetical
protein C36E8.2 protein.
Length = 254
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 235 KAENRSEATAPSTSASGLPKMSTQ 306
K+ R AT PSTS+S P +S+Q
Sbjct: 13 KSVRRKSATTPSTSSSSRPSISSQ 36
>AF039037-4|AAC48229.3| 311|Caenorhabditis elegans Protein kinase
protein 34 protein.
Length = 311
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 74 LELCPSPVTPLSVISNSVSCAHPY----PLRNGSVLFQLFGQFALNNKR 208
L++ P P++PLSV++N PY PL GS FGQ AL + R
Sbjct: 4 LQVVPPPISPLSVLANHPD--RPYEVLKPLGQGS-----FGQVALVSNR 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,938,322
Number of Sequences: 27780
Number of extensions: 334045
Number of successful extensions: 1254
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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