Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30413
(802 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 147 8e-36
03_01_0547 + 4093196-4093657,4094267-4095148 147 8e-36
03_01_0544 + 4082528-4082989,4083585-4084466 147 8e-36
03_01_0543 + 4076981-4077442,4078145-4079026 147 8e-36
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 106 2e-23
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 101 9e-22
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 95 8e-20
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 95 8e-20
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 94 1e-19
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 64 9e-11
02_04_0462 + 23131433-23132836 63 2e-10
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 36 0.038
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 33 0.35
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 33 0.35
02_04_0148 - 20198407-20201424 31 0.81
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.81
01_02_0020 - 10269252-10269314,10269442-10269483,10269759-102702... 31 0.81
03_05_0511 + 25056018-25059107 31 1.4
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 30 1.9
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 30 2.5
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 30 2.5
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 3.3
09_04_0232 - 15882589-15882720,15882799-15882889,15882987-158830... 29 4.3
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 29 4.3
08_02_0869 - 22031889-22032017,22032114-22032204,22032289-220323... 29 4.3
04_04_0446 - 25288154-25288863,25288949-25289135,25289331-25291061 29 4.3
04_01_0534 - 6958965-6959339,6960604-6960732 29 4.3
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 29 4.3
01_02_0134 + 11470543-11470608,11471718-11471775,11472025-114722... 29 4.3
01_01_0016 - 88825-90411 29 4.3
10_01_0291 + 3010685-3010838,3010954-3011489 29 5.7
10_01_0290 + 2999775-2999928,3000281-3000816 29 5.7
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 29 5.7
07_03_0154 + 14509979-14512033 29 5.7
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 29 5.7
05_04_0116 + 18131510-18133192 29 5.7
01_03_0227 + 13967966-13968559 29 5.7
10_01_0204 + 2199778-2200835,2201212-2201311 28 7.5
06_03_1165 - 28106604-28106915 28 9.9
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 147 bits (357), Expect = 8e-36
Identities = 67/85 (78%), Positives = 77/85 (90%)
Frame = +2
Query: 509 GGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 688
GGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+
Sbjct: 245 GGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA 304
Query: 689 VKELRRGYVAGDSKNNPPKGAADFT 763
VK+L+RGYVA +SK++P K AA FT
Sbjct: 305 VKDLKRGYVASNSKDDPAKEAASFT 329
Score = 140 bits (338), Expect = 2e-33
Identities = 65/86 (75%), Positives = 76/86 (88%)
Frame = +1
Query: 4 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 183
T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ
Sbjct: 88 TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQ 147
Query: 184 LIVGVNKMDSTEPPYSEPRFEEIKRK 261
+I NKMD+T P YS+ R++EI ++
Sbjct: 148 MICCCNKMDATTPKYSKARYDEIVKE 173
Score = 101 bits (242), Expect = 7e-22
Identities = 50/85 (58%), Positives = 60/85 (70%)
Frame = +3
Query: 255 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEA 434
KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G L+EA
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEA 219
Query: 435 LDAILPPARPTDKPLRLPLQDVYKM 509
LD I P RP+DKPLRLPLQDVYK+
Sbjct: 220 LDQINEPKRPSDKPLRLPLQDVYKI 244
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +1
Query: 757 FYAQVIVLNHPGQI 798
F +QVI++NHPGQI
Sbjct: 328 FTSQVIIMNHPGQI 341
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 147 bits (357), Expect = 8e-36
Identities = 67/85 (78%), Positives = 77/85 (90%)
Frame = +2
Query: 509 GGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 688
GGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+
Sbjct: 245 GGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA 304
Query: 689 VKELRRGYVAGDSKNNPPKGAADFT 763
VK+L+RGYVA +SK++P K AA FT
Sbjct: 305 VKDLKRGYVASNSKDDPAKEAASFT 329
Score = 140 bits (338), Expect = 2e-33
Identities = 65/86 (75%), Positives = 76/86 (88%)
Frame = +1
Query: 4 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 183
T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ
Sbjct: 88 TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQ 147
Query: 184 LIVGVNKMDSTEPPYSEPRFEEIKRK 261
+I NKMD+T P YS+ R++EI ++
Sbjct: 148 MICCCNKMDATTPKYSKARYDEIVKE 173
Score = 101 bits (242), Expect = 7e-22
Identities = 50/85 (58%), Positives = 60/85 (70%)
Frame = +3
Query: 255 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEA 434
KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G L+EA
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEA 219
Query: 435 LDAILPPARPTDKPLRLPLQDVYKM 509
LD I P RP+DKPLRLPLQDVYK+
Sbjct: 220 LDQINEPKRPSDKPLRLPLQDVYKI 244
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +1
Query: 757 FYAQVIVLNHPGQI 798
F +QVI++NHPGQI
Sbjct: 328 FTSQVIIMNHPGQI 341
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 147 bits (357), Expect = 8e-36
Identities = 67/85 (78%), Positives = 77/85 (90%)
Frame = +2
Query: 509 GGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 688
GGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+
Sbjct: 245 GGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA 304
Query: 689 VKELRRGYVAGDSKNNPPKGAADFT 763
VK+L+RGYVA +SK++P K AA FT
Sbjct: 305 VKDLKRGYVASNSKDDPAKEAASFT 329
Score = 140 bits (338), Expect = 2e-33
Identities = 65/86 (75%), Positives = 76/86 (88%)
Frame = +1
Query: 4 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 183
T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ
Sbjct: 88 TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQ 147
Query: 184 LIVGVNKMDSTEPPYSEPRFEEIKRK 261
+I NKMD+T P YS+ R++EI ++
Sbjct: 148 MICCCNKMDATTPKYSKARYDEIVKE 173
Score = 101 bits (242), Expect = 7e-22
Identities = 50/85 (58%), Positives = 60/85 (70%)
Frame = +3
Query: 255 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEA 434
KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G L+EA
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEA 219
Query: 435 LDAILPPARPTDKPLRLPLQDVYKM 509
LD I P RP+DKPLRLPLQDVYK+
Sbjct: 220 LDQINEPKRPSDKPLRLPLQDVYKI 244
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +1
Query: 757 FYAQVIVLNHPGQI 798
F +QVI++NHPGQI
Sbjct: 328 FTSQVIIMNHPGQI 341
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 147 bits (357), Expect = 8e-36
Identities = 67/85 (78%), Positives = 77/85 (90%)
Frame = +2
Query: 509 GGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 688
GGIGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+
Sbjct: 245 GGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVA 304
Query: 689 VKELRRGYVAGDSKNNPPKGAADFT 763
VK+L+RGYVA +SK++P K AA FT
Sbjct: 305 VKDLKRGYVASNSKDDPAKEAASFT 329
Score = 140 bits (338), Expect = 2e-33
Identities = 65/86 (75%), Positives = 76/86 (88%)
Frame = +1
Query: 4 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 183
T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ
Sbjct: 88 TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQ 147
Query: 184 LIVGVNKMDSTEPPYSEPRFEEIKRK 261
+I NKMD+T P YS+ R++EI ++
Sbjct: 148 MICCCNKMDATTPKYSKARYDEIVKE 173
Score = 101 bits (242), Expect = 7e-22
Identities = 50/85 (58%), Positives = 60/85 (70%)
Frame = +3
Query: 255 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEA 434
KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G L+EA
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEA 219
Query: 435 LDAILPPARPTDKPLRLPLQDVYKM 509
LD I P RP+DKPLRLPLQDVYK+
Sbjct: 220 LDQINEPKRPSDKPLRLPLQDVYKI 244
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +1
Query: 757 FYAQVIVLNHPGQI 798
F +QVI++NHPGQI
Sbjct: 328 FTSQVIIMNHPGQI 341
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 106 bits (255), Expect = 2e-23
Identities = 47/86 (54%), Positives = 65/86 (75%)
Frame = +1
Query: 4 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 183
TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH LLA TLGV +
Sbjct: 34 TILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGVSK 93
Query: 184 LIVGVNKMDSTEPPYSEPRFEEIKRK 261
L+V +NKMD + +S+ R++EI+ K
Sbjct: 94 LVVVINKMDESTVGWSKERYDEIEGK 119
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/92 (26%), Positives = 46/92 (50%)
Frame = +2
Query: 515 IGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 694
+GTV +G++E+G + G ++ P +V SV + ++ A PG+NV + +
Sbjct: 194 MGTVVMGKIESGTISEGDNMLVMPNKANVKVISVHCDEDRVRSAAPGENVRVKLSGIEED 253
Query: 695 ELRRGYVAGDSKNNPPKGAADFTLKSLCLTIL 790
++ G+V K NP ++F + L +L
Sbjct: 254 DITAGFVLSSIK-NPVSAISEFRAQLQILELL 284
Score = 41.5 bits (93), Expect = 8e-04
Identities = 30/80 (37%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 270 YIKKIGYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAI 446
++K GYN V F+PISG G NM K W G CL E LD I
Sbjct: 123 FLKSSGYNVKKDVHFLPISGLLGTNMKTRMDKSNC--SWW--------SGPCLFEVLDCI 172
Query: 447 LPPARPTDKPLRLPLQDVYK 506
P R P+R+P+ D YK
Sbjct: 173 QVPLRDPKGPVRMPIIDKYK 192
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 101 bits (241), Expect = 9e-22
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Frame = +1
Query: 4 TIIDAP----GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 171
TI+DAP GH+ ++ NMI+G SQAD VL+++A GEFE G K GQTREH LLA TL
Sbjct: 75 TILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTREHVLLAKTL 134
Query: 172 GVKQLIVGVNKMDSTEPPYSEPRFEEIKRK 261
GV +LIV +NKMD +S+ R++EI+ K
Sbjct: 135 GVAKLIVVINKMDEPTVKWSKERYDEIESK 164
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/92 (22%), Positives = 45/92 (48%)
Frame = +2
Query: 515 IGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 694
+GTV +G++E+G ++ G ++ P +V + + ++ A P +NV + + +
Sbjct: 239 MGTVVMGKIESGTIREGDSLLVMPNKTNVKVIGISLDEHKVRRAGPAENVRVKLSGIEDE 298
Query: 695 ELRRGYVAGDSKNNPPKGAADFTLKSLCLTIL 790
++ G+V S NP +F + L +L
Sbjct: 299 DIMAGFVL-SSIGNPVGAVTEFNAQLQILELL 329
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +3
Query: 252 QKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLI 428
+ ++ +++ GYN V F+PISG G NM K W DG CL
Sbjct: 162 ESKMVPFLRSSGYNVKKDVHFLPISGLLGSNMKTRMDKS--ICSWW--------DGPCLF 211
Query: 429 EALDAILPPARPTDKPLRLPLQDVYK 506
E LD I P R P+R+P+ D YK
Sbjct: 212 EVLDCIEVPLRDPKGPVRMPIIDKYK 237
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 94.7 bits (225), Expect = 8e-20
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTREHALLAF 165
V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+ GQT+EHA L
Sbjct: 327 VVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIR 386
Query: 166 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 255
+ GV+QLIV VNKMD+ YS+ RFE IK
Sbjct: 387 SFGVEQLIVAVNKMDAI--GYSKERFEFIK 414
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/83 (25%), Positives = 45/83 (54%)
Frame = +3
Query: 258 EVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEAL 437
++ S+++ + ++V ++P+S N+++ + + +Q G CL++A+
Sbjct: 416 QLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQ---------GFCLLDAI 466
Query: 438 DAILPPARPTDKPLRLPLQDVYK 506
D++ P+R KPL LP+ DV K
Sbjct: 467 DSLQLPSRDVSKPLILPICDVIK 489
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +2
Query: 533 GRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRG 709
G++ETG ++ G+ V+ +P VKS+E + A GDNV +++ + +L G
Sbjct: 500 GKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAVSLQGIDGSKLILG 558
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 94.7 bits (225), Expect = 8e-20
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTREHALLAF 165
V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+ GQT+EHA L
Sbjct: 327 VVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIR 386
Query: 166 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 255
+ GV+QLIV VNKMD+ YS+ RFE IK
Sbjct: 387 SFGVEQLIVAVNKMDAI--GYSKERFEFIK 414
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/83 (25%), Positives = 45/83 (54%)
Frame = +3
Query: 258 EVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEAL 437
++ S+++ + ++V ++P+S N+++ + + +Q G CL++A+
Sbjct: 416 QLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQ---------GFCLLDAI 466
Query: 438 DAILPPARPTDKPLRLPLQDVYK 506
D++ P+R KPL LP+ DV K
Sbjct: 467 DSLQLPSRDVSKPLILPICDVIK 489
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +2
Query: 533 GRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRG 709
G++ETG ++ G+ V+ +P VKS+E + A GDNV +++ + +L G
Sbjct: 500 GKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAVSLQGIDGSKLILG 558
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 93.9 bits (223), Expect = 1e-19
Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN--GQTREHALLAFTLG 174
V ++D+PGH+DF+ NMI+G +Q+D A+L++ A G FEAG+ N GQT+EH+ L + G
Sbjct: 314 VVLLDSPGHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGINGIGQTKEHSQLVRSFG 373
Query: 175 VKQLIVGVNKMDSTEPPYSEPRFEEIK 255
V LIV VNKMDS E YS+ RF IK
Sbjct: 374 VDNLIVVVNKMDSVE--YSKERFNFIK 398
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = +3
Query: 252 QKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIE 431
+ ++ ++++ GY +AVA+VPIS +N++ ++ W DG CL++
Sbjct: 398 KSQLGAFLRSCGYKDSAVAWVPISAMENENLMTTASDTR-LSSWY--------DGNCLLK 448
Query: 432 ALDAILPPARPTDKPLRLPLQDVY 503
A+D + PP+R KPLRLP+ DV+
Sbjct: 449 AIDTLPPPSRDVSKPLRLPICDVF 472
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 64.5 bits (150), Expect = 9e-11
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +1
Query: 10 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 189
+D PGH D++KNMITG +Q D +L+V+A G QT+EH LLA +GV L+
Sbjct: 135 VDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMP-------QTKEHILLARQVGVPSLV 187
Query: 190 VGVNKMDSTEPP 225
+NK+D+ + P
Sbjct: 188 CFLNKVDAVDDP 199
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +2
Query: 512 GIGTVPVGRVETGVLKPGT---IVVFAPAN-ITTEVKSVEMHHEALQEAVPGDNVGFNVK 679
G GTV GRVE G +K G I+ P+ + T V VEM + L GDNVG ++
Sbjct: 280 GRGTVVTGRVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKILDHGEAGDNVGLLLR 339
Query: 680 NVSVKELRRGYV 715
+ +++RG V
Sbjct: 340 GLKRGDVQRGQV 351
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Frame = +3
Query: 351 PSTKMPWFKGWQVERKEGKAD--GKC----LIEALDAILP-PARPTDKPLRLPLQDVYKM 509
P ++P +G + +G D GK L++A+D +P P R DK +P++DV+ +
Sbjct: 219 PGDEIPIIRGSALSALQGTNDEIGKNAILKLMDAVDEYIPDPVRQLDKSFLMPIEDVFSI 278
>02_04_0462 + 23131433-23132836
Length = 467
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/70 (42%), Positives = 44/70 (62%)
Frame = +1
Query: 10 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 189
+D PGH D++KNMITG +Q D A+L+V+ G QT+EH LLA +GV +++
Sbjct: 138 VDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPKIV 190
Query: 190 VGVNKMDSTE 219
V +NK D +
Sbjct: 191 VFLNKKDQVD 200
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 512 GIGTVPVGRVETGVLKPGTIVVFAPANITTE--VKSVEMHHEALQEAVPGDNVGFNVKNV 685
G GTV GR+E G +K G V T V VEM + + +A+ GDNVG ++ +
Sbjct: 291 GRGTVATGRIERGTVKVGDTVDIVGIRETRNCTVTGVEMFQKTMDDAMAGDNVGLLLRGM 350
Query: 686 SVKELRRGYV 715
++ RG V
Sbjct: 351 QKDDIERGMV 360
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 35.9 bits (79), Expect = 0.038
Identities = 22/86 (25%), Positives = 41/86 (47%)
Frame = +1
Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
V+ +D PGH + M+ G + D A+L++AA QT EH + ++
Sbjct: 150 VSFVDCPGHDILMATMLNGAAIMDGALLLIAANES------CPQPQTSEHLAAVEIMRLQ 203
Query: 181 QLIVGVNKMDSTEPPYSEPRFEEIKR 258
+I+ NK+D + + + E I++
Sbjct: 204 HIIILQNKIDLIQEGAAMNQHEAIQK 229
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +1
Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
+T +D PGH F G + D VL+VAA G + + HA A
Sbjct: 247 ITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTL----EAMSHAKAANV---- 298
Query: 181 QLIVGVNKMDST 216
++V VNK D +
Sbjct: 299 PIVVAVNKCDKS 310
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 32.7 bits (71), Expect = 0.35
Identities = 36/129 (27%), Positives = 50/129 (38%)
Frame = +1
Query: 7 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 186
I+D PGH +F M AD AVL+V A G+ N E A+ T +
Sbjct: 223 IMDTPGHVNFSDEMTAALRIADGAVLVVDAA-----EGVMVN---TERAIRHATQERLPI 274
Query: 187 IVGVNKMDSTEPPYSEPRFEEIKRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKC 366
+V +NK+D P + K HT A L+S + GT+ + C
Sbjct: 275 VVVINKVDRLITELKLPP-NDAYFKLRHTLE--AINDLISSCSTTVGGTQLVDPAAGNVC 331
Query: 367 LGSRDGRWS 393
S WS
Sbjct: 332 FASGSAGWS 340
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 105
V +ID+PGH DF + AD A+++V A G
Sbjct: 89 VHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.81
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +1
Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
+ ++D PGH DF + + AVL+V AG G QT+ A G++
Sbjct: 125 LNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPL-------AQTKFVLSKALKYGLR 177
Query: 181 QLIVGVNKMDSTEPPYSEPRFEEIK 255
+++ +NK+D P SE E++
Sbjct: 178 PILL-LNKVD--RPSVSEETCNEVE 199
>01_02_0020 -
10269252-10269314,10269442-10269483,10269759-10270244,
10270338-10270421,10270491-10270556,10270718-10270810,
10270901-10271987,10273338-10273362,10273881-10273899
Length = 654
Score = 31.5 bits (68), Expect = 0.81
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = -2
Query: 576 TTMVPGFNTPVSTLPTGTVPIPPFCIRLAG---EDAGACQWGGQVAGWHRELQ*GIFRQ 409
T+ +P F P T+P+ +PPF LAG +G Q G +A ++ Q GI Q
Sbjct: 538 TSTMPMFGVPGQTIPSSASSVPPFA-SLAGLPVRPSGVPQVSGAMANMVQDQQQGIANQ 595
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 105
V +ID+PGH DF + + +D A+++V A G
Sbjct: 77 VNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG 111
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 7 IIDAPGHRDFIKNMITGTSQADCAVLIV 90
+ID PGH+ F G+S D A+L+V
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILVV 516
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +1
Query: 7 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 186
+ID PGH F G S D AV++V + G+ K QT E L V+ +
Sbjct: 507 VIDTPGHESFSNMRSRGMSLCDIAVVVV-----DIMHGLEK--QTVETLALLKDRNVRFI 559
Query: 187 IVGVNKMD 210
+V +NK+D
Sbjct: 560 VV-LNKVD 566
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 156
V IID PGH DF + D A+L++ + G I+ + Q R + +
Sbjct: 138 VNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEI 189
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 7 IIDAPGHRDFIKNMITGTSQADCAVLIV 90
+ID PGH F G+S D A+L+V
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILVV 793
>09_04_0232 -
15882589-15882720,15882799-15882889,15882987-15883087,
15883494-15883592,15883693-15883830,15883918-15884508,
15884819-15884989,15885068-15885203,15885561-15885592,
15886280-15886336,15886434-15886686,15886762-15886850,
15887181-15887234,15887498-15887689,15887777-15887938
Length = 765
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 281 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 382
DW+ C AHF RRQ +G F A G+
Sbjct: 697 DWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGL 730
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 530 VGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 667
+G + + P TIV +P T KSVE +E L A G ++G
Sbjct: 252 LGTISMDKVTPSTIVGPSPVAGITVDKSVEFSYEELSNATQGFSIG 297
>08_02_0869 -
22031889-22032017,22032114-22032204,22032289-22032389,
22033262-22033303,22033393-22033491,22033616-22033753,
22033853-22034428,22034897-22035070,22035155-22035290,
22035694-22035725,22036873-22037125,22037216-22037304,
22037771-22037824,22038801-22038992,22039065-22039229
Length = 756
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 281 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 382
DW+ C AHF RRQ +G F A G+
Sbjct: 689 DWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGL 722
>04_04_0446 - 25288154-25288863,25288949-25289135,25289331-25291061
Length = 875
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 208 DSTEPP-YSEPRFEEIKRKYPHTSRRLATTQLLSLSCPFLD 327
D T P + FE+ P +SRR + T+ ++L CP +D
Sbjct: 609 DETSPTSILDTVFEDSNSNEPESSRRTSCTERVALRCPAID 649
>04_01_0534 - 6958965-6959339,6960604-6960732
Length = 167
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 513 PPFCIRLAGEDAGACQWGGQVAG 445
PP E A AC WGGQV G
Sbjct: 65 PPSIFTYMNEKASACFWGGQVHG 87
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 29.1 bits (62), Expect = 4.3
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
+ +ID PGH DF + + + A+L+V A G EA QT + LA +
Sbjct: 145 LNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VEA------QTLANVYLALENDL- 196
Query: 181 QLIVGVNKMD--STEPPYSEPRFEEI 252
++I +NK+D EP EEI
Sbjct: 197 EIIPVLNKIDLPGAEPDRVAQEIEEI 222
>01_02_0134 +
11470543-11470608,11471718-11471775,11472025-11472278,
11472307-11472511,11472907-11473142
Length = 272
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = +1
Query: 130 NGQTREHALLAFTLGVKQ----LIVGVNKMDSTEPPYSEPRFEEIKRKYPHTSRRLAT-T 294
N + +EH L T G LIV ++D P +EP+ +E K+ H + T T
Sbjct: 81 NDKAKEHELPKGTEGPSTSAIVLIVSEKELDVQVVPENEPKVQEPKKSKSHQVWNVETET 140
Query: 295 QLLSLSCPFLDGTETT 342
+ CP + E T
Sbjct: 141 DVYEDPCPAKNDVENT 156
>01_01_0016 - 88825-90411
Length = 528
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 192 YDELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSA 73
YD F + +G+L L+V+ F+ TGT + D+H A
Sbjct: 241 YDAAF--RDHARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
>10_01_0291 + 3010685-3010838,3010954-3011489
Length = 229
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -1
Query: 493 CRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPLNQGILVEGSNMLSPCHPE 320
C G+ V + G + A H+PSAL + + C P+ + I+ P PE
Sbjct: 105 CPGQEPSKIVPMSEGTFIAVAGQTHYPSALCASATICGPIKKKIIDHFHKKPVPPKPE 162
>10_01_0290 + 2999775-2999928,3000281-3000816
Length = 229
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -1
Query: 493 CRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPLNQGILVEGSNMLSPCHPE 320
C G+ V + G + A H+PSAL + + C P+ + I+ P PE
Sbjct: 105 CPGQEPSKIVPMSEGTFVAIAGKTHYPSALCASATICGPIKKKIIDHFHKKPVPPKPE 162
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 382 HPLNQGILVEGSNMLSPCHPEMGTKATAAG 293
HP +L G N L+ C+P + AT AG
Sbjct: 258 HPSLNQLLGVGDNFLAECYPSTASTATVAG 287
>07_03_0154 + 14509979-14512033
Length = 684
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -2
Query: 348 PTCCLRAIQKWARKRQQLGCSQSS*CMRILPFDFLKSGLTVWWFSGIHFVYSYDELFDTE 169
P+C R QK R R ++ S+ + + D +K+G + FSGI + E+
Sbjct: 517 PSCPNRVSQKGLRNRLEVFRSRET-GWGVRSLDLIKAGTFICEFSGIVLTHQQSEIMAAN 575
Query: 168 GE 163
G+
Sbjct: 576 GD 577
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +1
Query: 208 DSTEPPYSEPRFEEIKRK 261
D T PPY PR EEI RK
Sbjct: 49 DYTPPPYDGPRAEEISRK 66
>05_04_0116 + 18131510-18133192
Length = 560
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = -3
Query: 248 SSNLGSLYGGSVE-SILFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPA---ATMS 81
+S G GGS+ S+ P S T V S P + PA+ +P PA ATM+
Sbjct: 66 ASGSGEGQGGSMSLSLQLRPLGSTPTAAVAVSVPPMAAAPMMAGPAAAAPAPAPPLATMA 125
Query: 80 TAQSA 66
AQ+A
Sbjct: 126 VAQNA 130
>01_03_0227 + 13967966-13968559
Length = 197
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 546 VSTLPTGTVPIPPFCIRLAGEDAGACQWGGQVAGWHR 436
+ + PT + +PP G+ A A + GG GW R
Sbjct: 29 LESAPTPSAQLPPAMAATDGDGAQAAEDGGDEPGWQR 65
>10_01_0204 + 2199778-2200835,2201212-2201311
Length = 385
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -1
Query: 496 SCRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHP 377
S R RRR ++ RAG R+ SRA +R PS S+ HP
Sbjct: 220 SARRRRRQSAIARAGARV-SRAGVR--PSPASSILVGVHP 256
>06_03_1165 - 28106604-28106915
Length = 103
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 604 SQICGDAPRSSPRSCTWRQCRFQRKERVRQGIASWLCCW 720
SQ G A SSP + R R +R E + A L CW
Sbjct: 62 SQTGGAAASSSPAAACGRAARSKRSEEEKMQKAYHLVCW 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,662,879
Number of Sequences: 37544
Number of extensions: 615460
Number of successful extensions: 2209
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2193
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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