Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30413
(802 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 176 2e-46
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 176 2e-46
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 176 2e-46
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 170 1e-44
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 107 2e-25
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 35 8e-04
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 2.5
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 5.8
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 176 bits (428), Expect = 2e-46
Identities = 84/87 (96%), Positives = 86/87 (98%)
Frame = +1
Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK
Sbjct: 14 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 73
Query: 181 QLIVGVNKMDSTEPPYSEPRFEEIKRK 261
QLIVGVNKMDSTEPPYSE RFEEIK++
Sbjct: 74 QLIVGVNKMDSTEPPYSETRFEEIKKE 100
Score = 152 bits (368), Expect = 4e-39
Identities = 67/74 (90%), Positives = 70/74 (94%)
Frame = +3
Query: 252 QKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIE 431
+KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIE
Sbjct: 98 KKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIE 157
Query: 432 ALDAILPPARPTDK 473
ALDAILPP RPTDK
Sbjct: 158 ALDAILPPTRPTDK 171
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 176 bits (428), Expect = 2e-46
Identities = 84/87 (96%), Positives = 86/87 (98%)
Frame = +1
Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK
Sbjct: 30 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 89
Query: 181 QLIVGVNKMDSTEPPYSEPRFEEIKRK 261
QLIVGVNKMDSTEPPYSE RFEEIK++
Sbjct: 90 QLIVGVNKMDSTEPPYSETRFEEIKKE 116
Score = 172 bits (419), Expect = 3e-45
Identities = 77/86 (89%), Positives = 81/86 (94%)
Frame = +3
Query: 252 QKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIE 431
+KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIE
Sbjct: 114 KKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIE 173
Query: 432 ALDAILPPARPTDKPLRLPLQDVYKM 509
ALDAILPP RPTDK LRLPLQDVYK+
Sbjct: 174 ALDAILPPTRPTDKALRLPLQDVYKI 199
Score = 150 bits (363), Expect = 2e-38
Identities = 70/75 (93%), Positives = 72/75 (96%)
Frame = +2
Query: 509 GGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 688
GGIGTVPVGRVETGVLKPG +V FAPA +TTEVKSVEMHHEALQEAVPGDNVGFNVKNVS
Sbjct: 200 GGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 259
Query: 689 VKELRRGYVAGDSKN 733
VKELRRGYVAGDSKN
Sbjct: 260 VKELRRGYVAGDSKN 274
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 176 bits (428), Expect = 2e-46
Identities = 84/87 (96%), Positives = 86/87 (98%)
Frame = +1
Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK
Sbjct: 87 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 146
Query: 181 QLIVGVNKMDSTEPPYSEPRFEEIKRK 261
QLIVGVNKMDSTEPPYSE RFEEIK++
Sbjct: 147 QLIVGVNKMDSTEPPYSETRFEEIKKE 173
Score = 173 bits (422), Expect = 1e-45
Identities = 81/91 (89%), Positives = 85/91 (93%)
Frame = +2
Query: 509 GGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 688
GGIGTVPVGRVETGVLKPG +V FAPA +TTEVKSVEMHHEALQEAVPGDNVGFNVKNVS
Sbjct: 257 GGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 316
Query: 689 VKELRRGYVAGDSKNNPPKGAADFTLKSLCL 781
VKELRRGYVAGDSKNNPPKGAADFT + + L
Sbjct: 317 VKELRRGYVAGDSKNNPPKGAADFTAQVIVL 347
Score = 172 bits (419), Expect = 3e-45
Identities = 77/86 (89%), Positives = 81/86 (94%)
Frame = +3
Query: 252 QKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIE 431
+KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIE
Sbjct: 171 KKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIE 230
Query: 432 ALDAILPPARPTDKPLRLPLQDVYKM 509
ALDAILPP RPTDK LRLPLQDVYK+
Sbjct: 231 ALDAILPPTRPTDKALRLPLQDVYKI 256
Score = 34.7 bits (76), Expect = 0.001
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +1
Query: 727 QKQPT*GCCRFYAQVIVLNHPGQIS 801
+ P G F AQVIVLNHPGQIS
Sbjct: 330 KNNPPKGAADFTAQVIVLNHPGQIS 354
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 170 bits (414), Expect = 1e-44
Identities = 81/87 (93%), Positives = 84/87 (96%)
Frame = +1
Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQTREHALLAFTLGVK
Sbjct: 87 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVK 146
Query: 181 QLIVGVNKMDSTEPPYSEPRFEEIKRK 261
QLIVGVNKMD T+PPYSE RFEEIK++
Sbjct: 147 QLIVGVNKMDMTDPPYSEARFEEIKKE 173
Score = 164 bits (399), Expect = 7e-43
Identities = 73/86 (84%), Positives = 80/86 (93%)
Frame = +3
Query: 252 QKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIE 431
+KEVSSYIKKIGYN A+VAFVPISGWHGDNMLEPS K PW+KGW+VERK+G ADGK LIE
Sbjct: 171 KKEVSSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIE 230
Query: 432 ALDAILPPARPTDKPLRLPLQDVYKM 509
ALDAILPP+RPTDK LRLPLQDVYK+
Sbjct: 231 ALDAILPPSRPTDKALRLPLQDVYKI 256
Score = 164 bits (399), Expect = 7e-43
Identities = 75/91 (82%), Positives = 83/91 (91%)
Frame = +2
Query: 509 GGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 688
GGIGTVPVGRVETG+LKPG +V FAPA +TTEVKSVEMHHEAL EA+PGDNVGFNVKN+S
Sbjct: 257 GGIGTVPVGRVETGILKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDNVGFNVKNIS 316
Query: 689 VKELRRGYVAGDSKNNPPKGAADFTLKSLCL 781
VKELRRGYVAGDSKN PP+GAADFT + + L
Sbjct: 317 VKELRRGYVAGDSKNQPPRGAADFTAQVIVL 347
Score = 36.7 bits (81), Expect = 3e-04
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +1
Query: 727 QKQPT*GCCRFYAQVIVLNHPGQIS 801
+ QP G F AQVIVLNHPGQIS
Sbjct: 330 KNQPPRGAADFTAQVIVLNHPGQIS 354
Score = 21.8 bits (44), Expect = 7.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 660 LSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFN 553
L PG A ++T++ SV M A T +PG N
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDN 307
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 107 bits (256), Expect = 2e-25
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = +2
Query: 608 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTLKSLCL 781
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFT + + L
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVL 58
Score = 36.7 bits (81), Expect = 3e-04
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +1
Query: 727 QKQPT*GCCRFYAQVIVLNHPGQIS 801
+ QP G F AQVIVLNHPGQIS
Sbjct: 41 KNQPPRGAADFTAQVIVLNHPGQIS 65
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 35.1 bits (77), Expect = 8e-04
Identities = 28/85 (32%), Positives = 38/85 (44%)
Frame = +1
Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 181 QLIVGVNKMDSTEPPYSEPRFEEIK 255
+IV +NK+D + ++E K
Sbjct: 247 PIIVAINKIDKPNIDIIKVQYELAK 271
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.4 bits (48), Expect = 2.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 469 TSPCVFPCKTYTKWWYWYRARRQS 540
T PCV +W Y +RAR +S
Sbjct: 717 TDPCVRYYPRRKEWLYLHRARSES 740
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 5.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 714 LLVTPKTTHLRVLQILRSSHCA*PSWSN 797
L TP++THL+V I R PS N
Sbjct: 381 LCPTPRSTHLKVSGINRVGSTRRPSRRN 408
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,888
Number of Sequences: 438
Number of extensions: 5449
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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