BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30413 (802 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 146 1e-35 At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 146 1e-35 At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 146 1e-35 At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 146 1e-35 At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 105 3e-23 At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 92 5e-19 At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 62 3e-10 At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 62 6e-10 At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 41 0.001 At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 38 0.006 At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 38 0.006 At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 37 0.014 At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.29 At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 31 0.89 At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 31 0.89 At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 31 1.2 At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 31 1.2 At4g31430.2 68417.m04465 expressed protein 30 1.6 At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 30 1.6 At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.6 At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 1.6 At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 2.1 At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 2.1 At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 29 2.7 At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 29 2.7 At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 29 2.7 At3g57550.1 68416.m06408 guanylate kinase 2 (GK-2) identical to ... 29 3.6 At5g50780.1 68418.m06291 ATP-binding region, ATPase-like domain-... 29 4.7 At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma mem... 29 4.7 At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearl... 29 4.7 At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 4.7 At1g27900.1 68414.m03419 RNA helicase, putative similar to SP|Q1... 29 4.7 At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 28 6.3 At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 6.3 At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 6.3 At5g13650.2 68418.m01585 elongation factor family protein contai... 28 8.3 At5g13650.1 68418.m01584 elongation factor family protein contai... 28 8.3 At5g13580.1 68418.m01570 ABC transporter family protein 28 8.3 At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 28 8.3 >At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha identical to SWISS-PROT:P13905 elongation factor 1-alpha (EF-1-alpha) [Arabidopsis thaliana] Length = 449 Score = 146 bits (354), Expect = 1e-35 Identities = 65/85 (76%), Positives = 78/85 (91%) Frame = +2 Query: 509 GGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 688 GGIGTVPVGRVETG++KPG +V FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+ Sbjct: 245 GGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVA 304 Query: 689 VKELRRGYVAGDSKNNPPKGAADFT 763 VK+L+RGYVA +SK++P KGAA+FT Sbjct: 305 VKDLKRGYVASNSKDDPAKGAANFT 329 Score = 139 bits (337), Expect = 2e-33 Identities = 65/83 (78%), Positives = 74/83 (89%) Frame = +1 Query: 4 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 183 T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ Sbjct: 88 TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQ 147 Query: 184 LIVGVNKMDSTEPPYSEPRFEEI 252 +I NKMD+T P YS+ R++EI Sbjct: 148 MICCCNKMDATTPKYSKARYDEI 170 Score = 101 bits (242), Expect = 6e-22 Identities = 50/85 (58%), Positives = 60/85 (70%) Frame = +3 Query: 255 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEA 434 KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G L+EA Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEA 219 Query: 435 LDAILPPARPTDKPLRLPLQDVYKM 509 LD I P RP+DKPLRLPLQDVYK+ Sbjct: 220 LDQINEPKRPSDKPLRLPLQDVYKI 244 Score = 31.5 bits (68), Expect = 0.67 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 736 PT*GCCRFYAQVIVLNHPGQI 798 P G F +QVI++NHPGQI Sbjct: 321 PAKGAANFTSQVIIMNHPGQI 341 >At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 146 bits (354), Expect = 1e-35 Identities = 65/85 (76%), Positives = 78/85 (91%) Frame = +2 Query: 509 GGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 688 GGIGTVPVGRVETG++KPG +V FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+ Sbjct: 245 GGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVA 304 Query: 689 VKELRRGYVAGDSKNNPPKGAADFT 763 VK+L+RGYVA +SK++P KGAA+FT Sbjct: 305 VKDLKRGYVASNSKDDPAKGAANFT 329 Score = 139 bits (337), Expect = 2e-33 Identities = 65/83 (78%), Positives = 74/83 (89%) Frame = +1 Query: 4 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 183 T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ Sbjct: 88 TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQ 147 Query: 184 LIVGVNKMDSTEPPYSEPRFEEI 252 +I NKMD+T P YS+ R++EI Sbjct: 148 MICCCNKMDATTPKYSKARYDEI 170 Score = 101 bits (242), Expect = 6e-22 Identities = 50/85 (58%), Positives = 60/85 (70%) Frame = +3 Query: 255 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEA 434 KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G L+EA Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEA 219 Query: 435 LDAILPPARPTDKPLRLPLQDVYKM 509 LD I P RP+DKPLRLPLQDVYK+ Sbjct: 220 LDQINEPKRPSDKPLRLPLQDVYKI 244 Score = 31.5 bits (68), Expect = 0.67 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 736 PT*GCCRFYAQVIVLNHPGQI 798 P G F +QVI++NHPGQI Sbjct: 321 PAKGAANFTSQVIIMNHPGQI 341 >At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 146 bits (354), Expect = 1e-35 Identities = 65/85 (76%), Positives = 78/85 (91%) Frame = +2 Query: 509 GGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 688 GGIGTVPVGRVETG++KPG +V FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+ Sbjct: 245 GGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVA 304 Query: 689 VKELRRGYVAGDSKNNPPKGAADFT 763 VK+L+RGYVA +SK++P KGAA+FT Sbjct: 305 VKDLKRGYVASNSKDDPAKGAANFT 329 Score = 139 bits (337), Expect = 2e-33 Identities = 65/83 (78%), Positives = 74/83 (89%) Frame = +1 Query: 4 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 183 T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ Sbjct: 88 TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQ 147 Query: 184 LIVGVNKMDSTEPPYSEPRFEEI 252 +I NKMD+T P YS+ R++EI Sbjct: 148 MICCCNKMDATTPKYSKARYDEI 170 Score = 101 bits (242), Expect = 6e-22 Identities = 50/85 (58%), Positives = 60/85 (70%) Frame = +3 Query: 255 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEA 434 KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G L+EA Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEA 219 Query: 435 LDAILPPARPTDKPLRLPLQDVYKM 509 LD I P RP+DKPLRLPLQDVYK+ Sbjct: 220 LDQINEPKRPSDKPLRLPLQDVYKI 244 Score = 31.5 bits (68), Expect = 0.67 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 736 PT*GCCRFYAQVIVLNHPGQI 798 P G F +QVI++NHPGQI Sbjct: 321 PAKGAANFTSQVIIMNHPGQI 341 >At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 146 bits (354), Expect = 1e-35 Identities = 65/85 (76%), Positives = 78/85 (91%) Frame = +2 Query: 509 GGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 688 GGIGTVPVGRVETG++KPG +V FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+ Sbjct: 245 GGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVA 304 Query: 689 VKELRRGYVAGDSKNNPPKGAADFT 763 VK+L+RGYVA +SK++P KGAA+FT Sbjct: 305 VKDLKRGYVASNSKDDPAKGAANFT 329 Score = 139 bits (337), Expect = 2e-33 Identities = 65/83 (78%), Positives = 74/83 (89%) Frame = +1 Query: 4 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 183 T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ Sbjct: 88 TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQ 147 Query: 184 LIVGVNKMDSTEPPYSEPRFEEI 252 +I NKMD+T P YS+ R++EI Sbjct: 148 MICCCNKMDATTPKYSKARYDEI 170 Score = 101 bits (242), Expect = 6e-22 Identities = 50/85 (58%), Positives = 60/85 (70%) Frame = +3 Query: 255 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEA 434 KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G L+EA Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEA 219 Query: 435 LDAILPPARPTDKPLRLPLQDVYKM 509 LD I P RP+DKPLRLPLQDVYK+ Sbjct: 220 LDQINEPKRPSDKPLRLPLQDVYKI 244 Score = 31.5 bits (68), Expect = 0.67 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 736 PT*GCCRFYAQVIVLNHPGQI 798 P G F +QVI++NHPGQI Sbjct: 321 PAKGAANFTSQVIIMNHPGQI 341 >At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein, putative similar to EF-1-alpha-related GTP-binding protein gi|1009232|gb|AAA79032 Length = 532 Score = 105 bits (252), Expect = 3e-23 Identities = 48/86 (55%), Positives = 64/86 (74%) Frame = +1 Query: 4 TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 183 TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH LA TLGV + Sbjct: 182 TILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSK 241 Query: 184 LIVGVNKMDSTEPPYSEPRFEEIKRK 261 LIV VNKMD +S+ R++EI++K Sbjct: 242 LIVVVNKMDDPTVNWSKERYDEIEQK 267 Score = 43.6 bits (98), Expect = 2e-04 Identities = 23/92 (25%), Positives = 47/92 (51%) Frame = +2 Query: 515 IGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 694 +GTV +G+VE+G ++ G +V P +V ++ + ++ A PG+N+ + + + Sbjct: 342 MGTVVMGKVESGSIREGDSLVVMPNKEQVKVVAIYCDEDKVKRAGPGENLRVRITGIEDE 401 Query: 695 ELRRGYVAGDSKNNPPKGAADFTLKSLCLTIL 790 ++ G+V S NP +F + L +L Sbjct: 402 DILSGFVL-SSIVNPVPAVTEFVAQLQILELL 432 Score = 37.5 bits (83), Expect = 0.010 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 3/88 (3%) Frame = +3 Query: 252 QKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--MPWFKGWQVERKEGKADGKC 422 ++++ ++K GYN V F+PISG G NM + + PW W G Sbjct: 265 EQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMGQEICPW---W---------SGPS 312 Query: 423 LIEALDAILPPARPTDKPLRLPLQDVYK 506 E LD+I P R + P R+P+ D +K Sbjct: 313 FFEVLDSIEIPPRDPNGPFRMPIIDKFK 340 >At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / EF-1-alpha, putative contains similarity to SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha) [Aeropyrum pernix] Length = 667 Score = 91.9 bits (218), Expect = 5e-19 Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 1/87 (1%) Frame = +1 Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQTREHALLAFTLGV 177 V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG GQTREHA + GV Sbjct: 319 VVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQTREHARVLRGFGV 378 Query: 178 KQLIVGVNKMDSTEPPYSEPRFEEIKR 258 +Q+IV +NKMD YS+ RF+ IK+ Sbjct: 379 EQVIVAINKMDIV--GYSKERFDLIKQ 403 Score = 37.9 bits (84), Expect = 0.008 Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Frame = +3 Query: 252 QKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE-PSTKMPWFKGWQVERKEGKADGKCLI 428 ++ V S+++ + +++ ++P+S N++ PS W G CL+ Sbjct: 402 KQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAPSDNR--LSSWY--------QGPCLL 451 Query: 429 EALDAILPPARPTDKPLRLPLQDVYK 506 +A+D++ P R KPL +P+ D + Sbjct: 452 DAVDSVKSPDRDVSKPLLMPICDAVR 477 Score = 37.9 bits (84), Expect = 0.008 Identities = 17/61 (27%), Positives = 33/61 (54%) Frame = +2 Query: 533 GRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGY 712 G++E G ++PG+ V+ P+ ++S+E +A A GDNV ++ + ++ G Sbjct: 488 GKLEAGAVRPGSKVMVMPSGDQGTIRSLERDSQACTIARAGDNVALALQGIDANQVMAGD 547 Query: 713 V 715 V Sbjct: 548 V 548 >At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) identical to SWISS-PROT:P17745 elongation factor Tu, chloroplast precursor (EF-Tu) [Arabidopsis thaliana] Length = 476 Score = 62.5 bits (145), Expect = 3e-10 Identities = 30/70 (42%), Positives = 43/70 (61%) Frame = +1 Query: 10 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 189 +D PGH D++KNMITG +Q D A+L+V+ G QT+EH LLA +GV ++ Sbjct: 147 VDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPDMV 199 Query: 190 VGVNKMDSTE 219 V +NK D + Sbjct: 200 VFLNKEDQVD 209 Score = 49.2 bits (112), Expect = 3e-06 Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Frame = +2 Query: 512 GIGTVPVGRVETGVLKPGTIVVFAPANITTE--VKSVEMHHEALQEAVPGDNVGFNVKNV 685 G GTV GRVE G +K G V T V VEM + L EA+ GDNVG ++ + Sbjct: 300 GRGTVATGRVERGTVKVGETVDLVGLRETRSYTVTGVEMFQKILDEALAGDNVGLLLRGI 359 Query: 686 SVKELRRGYV 715 +++RG V Sbjct: 360 QKADIQRGMV 369 >At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu, putative similar to mitochondrial elongation factor Tu [Arabidopsis thaliana] gi|1149571|emb|CAA61511 Length = 454 Score = 61.7 bits (143), Expect = 6e-10 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = +1 Query: 10 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 189 +D PGH D++KNMITG +Q D +L+V+ G QT+EH LLA +GV L+ Sbjct: 135 VDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHILLARQVGVPSLV 187 Query: 190 VGVNKMDSTEPP 225 +NK+D + P Sbjct: 188 CFLNKVDVVDDP 199 Score = 41.9 bits (94), Expect = 5e-04 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 5/73 (6%) Frame = +2 Query: 512 GIGTVPVGRVETGVLKPGTIVVFAPAN-----ITTEVKSVEMHHEALQEAVPGDNVGFNV 676 G GTV GR+E GV+K G V + + V VEM + L GDNVG + Sbjct: 280 GRGTVATGRIEQGVIKVGEEVEILGLREGGVPLKSTVTGVEMFKKILDNGQAGDNVGLLL 339 Query: 677 KNVSVKELRRGYV 715 + + ++++RG V Sbjct: 340 RGLKREDIQRGMV 352 Score = 30.7 bits (66), Expect = 1.2 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Frame = +3 Query: 423 LIEALDAILP-PARPTDKPLRLPLQDVYKM 509 L++A+D +P P R DKP +P++DV+ + Sbjct: 249 LMDAVDEYIPDPVRVLDKPFLMPIEDVFSI 278 >At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative Length = 465 Score = 40.7 bits (91), Expect = 0.001 Identities = 26/92 (28%), Positives = 45/92 (48%) Frame = +1 Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180 V+ +D PGH + M+ G + D A+LI+AA QT EH + +K Sbjct: 121 VSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHLK 174 Query: 181 QLIVGVNKMDSTEPPYSEPRFEEIKRKYPHTS 276 +I+ NK+D + + + E+I+R +T+ Sbjct: 175 DIIIIQNKIDLIQENEAIKQHEDIQRFITNTN 206 >At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site. Length = 471 Score = 38.3 bits (85), Expect = 0.006 Identities = 24/92 (26%), Positives = 43/92 (46%) Frame = +1 Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180 V+ +D PGH + M+ G + D A+L++AA QT EH + +K Sbjct: 129 VSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLK 182 Query: 181 QLIVGVNKMDSTEPPYSEPRFEEIKRKYPHTS 276 +I+ NK+D + + E I++ +T+ Sbjct: 183 HIIILQNKIDLINEKAATEQHEAIQKFITNTN 214 >At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site. Length = 284 Score = 38.3 bits (85), Expect = 0.006 Identities = 24/92 (26%), Positives = 43/92 (46%) Frame = +1 Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180 V+ +D PGH + M+ G + D A+L++AA QT EH + +K Sbjct: 129 VSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLK 182 Query: 181 QLIVGVNKMDSTEPPYSEPRFEEIKRKYPHTS 276 +I+ NK+D + + E I++ +T+ Sbjct: 183 HIIILQNKIDLINEKAATEQHEAIQKFITNTN 214 >At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to gb|U37354 from S. pombe. ESTs gb|T41979, gb|N37284 and gb|N37529 come from this gene Length = 465 Score = 37.1 bits (82), Expect = 0.014 Identities = 23/86 (26%), Positives = 41/86 (47%) Frame = +1 Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180 V+ +D PGH + M+ G + D A+L++AA QT EH + +K Sbjct: 123 VSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSEHLAAVEIMQLK 176 Query: 181 QLIVGVNKMDSTEPPYSEPRFEEIKR 258 +I+ NK+D + + + E I++ Sbjct: 177 HIIILQNKIDLIQENVAINQHEAIQK 202 >At4g11160.1 68417.m01808 translation initiation factor IF-2, mitochondrial, putative similar to SP|P46198|IF2M_BOVIN Translation initiation factor IF-2, mitochondrial precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus} Length = 743 Score = 32.7 bits (71), Expect = 0.29 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +1 Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 105 +T +D PGH F + G + D VL+VAA G Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304 >At1g06220.2 68414.m00656 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 31.1 bits (67), Expect = 0.89 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +1 Query: 7 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 105 I+D PGH +F M AD AVLIV A G Sbjct: 213 IMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245 >At1g06220.1 68414.m00655 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 31.1 bits (67), Expect = 0.89 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +1 Query: 7 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 105 I+D PGH +F M AD AVLIV A G Sbjct: 213 IMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245 >At3g22980.1 68416.m02898 elongation factor Tu family protein similar to eukaryotic translation elongation factor 2 GB:NP_001952 [Homo sapiens] Length = 1015 Score = 30.7 bits (66), Expect = 1.2 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +1 Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 105 + +ID+PGH DF + T +D A+++V A G Sbjct: 76 LNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110 >At2g46830.1 68415.m05843 myb-related transcription factor (CCA1) identical to myb-related transcription factor (CCA1) GI:4090569 from [Arabidopsis thaliana] Length = 608 Score = 30.7 bits (66), Expect = 1.2 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +3 Query: 396 KEGKADGKCLIEALDAILPPARPTDKP 476 KE +A G + +ALD +PP RP KP Sbjct: 74 KEAEAKGVAMGQALDIAIPPPRPKRKP 100 >At4g31430.2 68417.m04465 expressed protein Length = 574 Score = 30.3 bits (65), Expect = 1.6 Identities = 19/37 (51%), Positives = 20/37 (54%) Frame = -1 Query: 541 NSADGHGTNTTILYTSCRGRRRGLSVGRAGGRMASRA 431 NSA NT +L S RGR RG GR GGR RA Sbjct: 538 NSASSSPGNTKVLAYSRRGRGRGRGRGR-GGRGKGRA 573 >At3g01360.1 68416.m00057 expressed protein contains Pfam profile PF04819: Family of unknown function (DUF716) (Plant viral-response family) Length = 319 Score = 30.3 bits (65), Expect = 1.6 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = +1 Query: 10 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 186 I GH D+ + T Q +C + L+V TG F +KNG R+ LG + Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285 Query: 187 IVGVNKMDSTE 219 + +DS E Sbjct: 286 NLSTFTLDSDE 296 >At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1201 Score = 30.3 bits (65), Expect = 1.6 Identities = 21/68 (30%), Positives = 34/68 (50%) Frame = +1 Query: 7 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 186 +ID PGH F G+S D A+L+V + + G+ QT E +L + + Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756 Query: 187 IVGVNKMD 210 I+ +NK+D Sbjct: 757 IIALNKVD 764 >At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1088 Score = 30.3 bits (65), Expect = 1.6 Identities = 22/70 (31%), Positives = 33/70 (47%) Frame = +1 Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180 + +ID PGH F G++ D A+L+V + G+ QT E L VK Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610 Query: 181 QLIVGVNKMD 210 I+ +NK+D Sbjct: 611 -FIIALNKVD 619 >At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain Length = 630 Score = 29.9 bits (64), Expect = 2.1 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +1 Query: 7 IIDAPGHRDFIKNMITGTSQADCAVLIV 90 +ID PGH F G+S D A+L+V Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140 >At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to IF2 protein [Drosophila melanogaster] GI:7108770; contains Pfam profile PF03144: Elongation factor Tu domain 2 Length = 1294 Score = 29.9 bits (64), Expect = 2.1 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +1 Query: 7 IIDAPGHRDFIKNMITGTSQADCAVLIV 90 +ID PGH F G+S D A+L+V Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799 >At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam profile: PF00168 C2 domain Length = 815 Score = 29.5 bits (63), Expect = 2.7 Identities = 25/68 (36%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Frame = +1 Query: 253 KRKYPHTSRRLATTQLLSLS---CPFLDGTETTCWSLQPKCLGSR-DGRWSVRKAKLTEN 420 KR SR + QLL S CP L G TCWS + R D W + Sbjct: 127 KRLRQRRSRLIENIQLLEFSLGSCPPLLGLHGTCWSKSGEQKIMRLDFNWDTTDLSILLQ 186 Query: 421 ASLKLSMP 444 A KLSMP Sbjct: 187 A--KLSMP 192 >At2g45030.1 68415.m05606 mitochondrial elongation factor, putative similar to SP|P25039 Elongation factor G 1, mitochondrial precursor (mEF-G-1) {Saccharomyces cerevisiae}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03764: Elongation factor G domain IV, PF00679: Elongation factor G C-terminus Length = 754 Score = 29.5 bits (63), Expect = 2.7 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +1 Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 150 V IID PGH DF + D A+L++ + G I+ + Q R + Sbjct: 135 VNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184 >At1g45332.1 68414.m05195 mitochondrial elongation factor, putative similar to mitochondrial elongation factor GI:3917 from [Saccharomyces cerevisiae] Length = 754 Score = 29.5 bits (63), Expect = 2.7 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +1 Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 150 V IID PGH DF + D A+L++ + G I+ + Q R + Sbjct: 135 VNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184 >At3g57550.1 68416.m06408 guanylate kinase 2 (GK-2) identical to guanylate kinase (GK-2) [Arabidopsis thaliana] gi|7861798|gb|AAF70409 Length = 389 Score = 29.1 bits (62), Expect = 3.6 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Frame = -3 Query: 371 PRHFG*RLQHVVSVP---SRNG---HESDSSWVVANLLDV*GYFLLISSNLGSLYGGSVE 210 P FG + H P +NG H +D + + + D G FL +S G+LYG S+E Sbjct: 162 PSMFGFSVSHTTRAPRCMEKNGVHYHFTDKTVMEKEIKD--GKFLEFASVHGNLYGTSIE 219 Query: 209 SI 204 S+ Sbjct: 220 SV 221 >At5g50780.1 68418.m06291 ATP-binding region, ATPase-like domain-containing protein low similarity to microrchidia [Homo sapiens] GI:5410257; contains Pfam profile PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein Length = 823 Score = 28.7 bits (61), Expect = 4.7 Identities = 14/64 (21%), Positives = 29/64 (45%) Frame = -3 Query: 566 YLVSTHQFQLCRRARYQYHHFVYVLQGKTQGLVSGAGRWQDGIESFNEAFSVSFAFLTLH 387 YL +H+F++ R + HH + +T+ + DG ++ +++ L LH Sbjct: 412 YLKISHEFRIILRGKDVEHHNIVNDMMQTEKITYRPKEAADGCAKYSNLYNLKIWLLVLH 471 Query: 386 LPSL 375 + L Sbjct: 472 VSQL 475 >At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA10) identical to SP|Q9SZR1 Potential calcium-transporting ATPase 10, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 10) {Arabidopsis thaliana}; similar to SP|Q9LF79 Calcium-transporting ATPase 8, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8) {Arabidopsis thaliana} Length = 1069 Score = 28.7 bits (61), Expect = 4.7 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = -2 Query: 651 GTASWRASWCISTDLTSVVMLAGAKTTMVPGFNT 550 G + WR W S DLT ++++ A ++ G T Sbjct: 178 GRSFWRFVWEASQDLTLIILIVAAVASLALGIKT 211 >At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearly identical to ubiquitin-protein ligase 1 [Arabidopsis thaliana] GI:7108521; E3, HECT-domain protein family; similar to GI:7108521, GB:AAF36454 from [Arabidopsis thaliana] Length = 3891 Score = 28.7 bits (61), Expect = 4.7 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = -2 Query: 558 FNTPVSTLPTGTVPIPPFCIRLAGEDA 478 F+TPV LP VP+ PF RLAG A Sbjct: 2521 FDTPV--LPFDQVPVDPFSARLAGGGA 2545 >At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase 1 [Arabidopsis thaliana] Swiss-Prot:Q42525 Length = 493 Score = 28.7 bits (61), Expect = 4.7 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +3 Query: 345 LEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 443 ++ T W KG++V EGK CL EA++A Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221 >At1g27900.1 68414.m03419 RNA helicase, putative similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam profiles PF04408: Helicase associated domain (HA2), PF00271: Helicase conserved C-terminal domain Length = 700 Score = 28.7 bits (61), Expect = 4.7 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = -2 Query: 672 LKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTP 547 L+P+LS + C+S LT V ML+ A+TT++P + P Sbjct: 428 LEPSLSRTLIEANETGCLSQALTVVAMLS-AETTLLPARSKP 468 >At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-binding protein GUF1 - Saccharomyces cerevisiae, PIR:S50374 Length = 661 Score = 28.3 bits (60), Expect = 6.3 Identities = 21/70 (30%), Positives = 32/70 (45%) Frame = +1 Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180 + +ID PGH DF + S A+L+V A G QT + LAF + Sbjct: 137 LNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------VQAQTVANFYLAFEANL- 188 Query: 181 QLIVGVNKMD 210 ++ +NK+D Sbjct: 189 TIVPVINKID 198 >At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing protein contains Pfam profile PF01388: ARID/BRIGHT DNA binding domain Length = 747 Score = 28.3 bits (60), Expect = 6.3 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +2 Query: 281 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 382 DW+ C AHF RR +GAF A G+ Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720 >At1g17220.1 68414.m02098 translation initiation factor IF-2, chloroplast, putative similar to SP|P57997|IF2C_PHAVU Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) {Phaseolus vulgaris} Length = 1026 Score = 28.3 bits (60), Expect = 6.3 Identities = 19/67 (28%), Positives = 29/67 (43%) Frame = +1 Query: 10 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 189 +D PGH F G D A+++VAA G QT E A+ ++ Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG-------IRPQTNE-AIAHAKAAAVPIV 608 Query: 190 VGVNKMD 210 + +NK+D Sbjct: 609 IAINKID 615 >At5g13650.2 68418.m01585 elongation factor family protein contains Pfam profiles: PF00009 elongation factor Tu GTP binding domain,PF00679 elongation factor G C-terminus, PF03144 elongation factor Tu domain 2 Length = 676 Score = 27.9 bits (59), Expect = 8.3 Identities = 26/81 (32%), Positives = 35/81 (43%) Frame = +1 Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180 V IID PGH DF + + D +L+V + G QTR A G Sbjct: 148 VNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP-------QTRFVLKKALEFG-H 199 Query: 181 QLIVGVNKMDSTEPPYSEPRF 243 ++V VNK+D P + P F Sbjct: 200 AVVVVVNKIDR---PSARPEF 217 >At5g13650.1 68418.m01584 elongation factor family protein contains Pfam profiles: PF00009 elongation factor Tu GTP binding domain,PF00679 elongation factor G C-terminus, PF03144 elongation factor Tu domain 2 Length = 675 Score = 27.9 bits (59), Expect = 8.3 Identities = 26/81 (32%), Positives = 35/81 (43%) Frame = +1 Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180 V IID PGH DF + + D +L+V + G QTR A G Sbjct: 147 VNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP-------QTRFVLKKALEFG-H 198 Query: 181 QLIVGVNKMDSTEPPYSEPRF 243 ++V VNK+D P + P F Sbjct: 199 AVVVVVNKIDR---PSARPEF 216 >At5g13580.1 68418.m01570 ABC transporter family protein Length = 727 Score = 27.9 bits (59), Expect = 8.3 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = -2 Query: 621 ISTDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTVPIPPFCIRLA 490 IS ++ +++GA TT ++PVST+PT PF + LA Sbjct: 384 ISASISKGKLVSGATTTTHSSGSSPVSTIPTFA---NPFWVELA 424 >At5g08650.1 68418.m01029 GTP-binding protein LepA, putative Length = 681 Score = 27.9 bits (59), Expect = 8.3 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 2/86 (2%) Frame = +1 Query: 1 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180 + +ID PGH DF + + + A+L+V A G EA QT + LA + Sbjct: 154 LNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VEA------QTLANVYLALENNL- 205 Query: 181 QLIVGVNKMD--STEPPYSEPRFEEI 252 ++I +NK+D EP EE+ Sbjct: 206 EIIPVLNKIDLPGAEPEKVLREIEEV 231 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,733,749 Number of Sequences: 28952 Number of extensions: 453731 Number of successful extensions: 1509 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 1438 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1496 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1814318400 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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