SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30413
         (802 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ...   146   1e-35
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ...   146   1e-35
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ...   146   1e-35
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ...   146   1e-35
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,...   105   3e-23
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E...    92   5e-19
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide...    62   3e-10
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,...    62   6e-10
At2g18720.1 68415.m02180 eukaryotic translation initiation facto...    41   0.001
At4g18330.2 68417.m02719 eukaryotic translation initiation facto...    38   0.006
At4g18330.1 68417.m02718 eukaryotic translation initiation facto...    38   0.006
At1g04170.1 68414.m00407 eukaryotic translation initiation facto...    37   0.014
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit...    33   0.29 
At1g06220.2 68414.m00656 elongation factor Tu family protein sim...    31   0.89 
At1g06220.1 68414.m00655 elongation factor Tu family protein sim...    31   0.89 
At3g22980.1 68416.m02898 elongation factor Tu family protein sim...    31   1.2  
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)...    31   1.2  
At4g31430.2 68417.m04465 expressed protein                             30   1.6  
At3g01360.1 68416.m00057 expressed protein contains Pfam profile...    30   1.6  
At1g76720.1 68414.m08929 eukaryotic translation initiation facto...    30   1.6  
At1g21160.1 68414.m02646 eukaryotic translation initiation facto...    30   1.6  
At1g76825.1 68414.m08940 eukaryotic translation initiation facto...    30   2.1  
At1g76810.1 68414.m08938 eukaryotic translation initiation facto...    30   2.1  
At3g18370.1 68416.m02336 C2 domain-containing protein contains P...    29   2.7  
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati...    29   2.7  
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati...    29   2.7  
At3g57550.1 68416.m06408 guanylate kinase 2 (GK-2) identical to ...    29   3.6  
At5g50780.1 68418.m06291 ATP-binding region, ATPase-like domain-...    29   4.7  
At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma mem...    29   4.7  
At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearl...    29   4.7  
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin...    29   4.7  
At1g27900.1 68414.m03419 RNA helicase, putative similar to SP|Q1...    29   4.7  
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-...    28   6.3  
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi...    28   6.3  
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl...    28   6.3  
At5g13650.2 68418.m01585 elongation factor family protein contai...    28   8.3  
At5g13650.1 68418.m01584 elongation factor family protein contai...    28   8.3  
At5g13580.1 68418.m01570 ABC transporter family protein                28   8.3  
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative            28   8.3  

>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
           identical to SWISS-PROT:P13905 elongation factor 1-alpha
           (EF-1-alpha) [Arabidopsis thaliana]
          Length = 449

 Score =  146 bits (354), Expect = 1e-35
 Identities = 65/85 (76%), Positives = 78/85 (91%)
 Frame = +2

Query: 509 GGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 688
           GGIGTVPVGRVETG++KPG +V FAP  +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+
Sbjct: 245 GGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVA 304

Query: 689 VKELRRGYVAGDSKNNPPKGAADFT 763
           VK+L+RGYVA +SK++P KGAA+FT
Sbjct: 305 VKDLKRGYVASNSKDDPAKGAANFT 329



 Score =  139 bits (337), Expect = 2e-33
 Identities = 65/83 (78%), Positives = 74/83 (89%)
 Frame = +1

Query: 4   TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 183
           T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ
Sbjct: 88  TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQ 147

Query: 184 LIVGVNKMDSTEPPYSEPRFEEI 252
           +I   NKMD+T P YS+ R++EI
Sbjct: 148 MICCCNKMDATTPKYSKARYDEI 170



 Score =  101 bits (242), Expect = 6e-22
 Identities = 50/85 (58%), Positives = 60/85 (70%)
 Frame = +3

Query: 255 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEA 434
           KEVSSY+KK+GYNP  + FVPISG+ GDNM+E ST + W+K            G  L+EA
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEA 219

Query: 435 LDAILPPARPTDKPLRLPLQDVYKM 509
           LD I  P RP+DKPLRLPLQDVYK+
Sbjct: 220 LDQINEPKRPSDKPLRLPLQDVYKI 244



 Score = 31.5 bits (68), Expect = 0.67
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 736 PT*GCCRFYAQVIVLNHPGQI 798
           P  G   F +QVI++NHPGQI
Sbjct: 321 PAKGAANFTSQVIIMNHPGQI 341


>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  146 bits (354), Expect = 1e-35
 Identities = 65/85 (76%), Positives = 78/85 (91%)
 Frame = +2

Query: 509 GGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 688
           GGIGTVPVGRVETG++KPG +V FAP  +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+
Sbjct: 245 GGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVA 304

Query: 689 VKELRRGYVAGDSKNNPPKGAADFT 763
           VK+L+RGYVA +SK++P KGAA+FT
Sbjct: 305 VKDLKRGYVASNSKDDPAKGAANFT 329



 Score =  139 bits (337), Expect = 2e-33
 Identities = 65/83 (78%), Positives = 74/83 (89%)
 Frame = +1

Query: 4   TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 183
           T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ
Sbjct: 88  TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQ 147

Query: 184 LIVGVNKMDSTEPPYSEPRFEEI 252
           +I   NKMD+T P YS+ R++EI
Sbjct: 148 MICCCNKMDATTPKYSKARYDEI 170



 Score =  101 bits (242), Expect = 6e-22
 Identities = 50/85 (58%), Positives = 60/85 (70%)
 Frame = +3

Query: 255 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEA 434
           KEVSSY+KK+GYNP  + FVPISG+ GDNM+E ST + W+K            G  L+EA
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEA 219

Query: 435 LDAILPPARPTDKPLRLPLQDVYKM 509
           LD I  P RP+DKPLRLPLQDVYK+
Sbjct: 220 LDQINEPKRPSDKPLRLPLQDVYKI 244



 Score = 31.5 bits (68), Expect = 0.67
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 736 PT*GCCRFYAQVIVLNHPGQI 798
           P  G   F +QVI++NHPGQI
Sbjct: 321 PAKGAANFTSQVIIMNHPGQI 341


>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  146 bits (354), Expect = 1e-35
 Identities = 65/85 (76%), Positives = 78/85 (91%)
 Frame = +2

Query: 509 GGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 688
           GGIGTVPVGRVETG++KPG +V FAP  +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+
Sbjct: 245 GGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVA 304

Query: 689 VKELRRGYVAGDSKNNPPKGAADFT 763
           VK+L+RGYVA +SK++P KGAA+FT
Sbjct: 305 VKDLKRGYVASNSKDDPAKGAANFT 329



 Score =  139 bits (337), Expect = 2e-33
 Identities = 65/83 (78%), Positives = 74/83 (89%)
 Frame = +1

Query: 4   TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 183
           T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ
Sbjct: 88  TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQ 147

Query: 184 LIVGVNKMDSTEPPYSEPRFEEI 252
           +I   NKMD+T P YS+ R++EI
Sbjct: 148 MICCCNKMDATTPKYSKARYDEI 170



 Score =  101 bits (242), Expect = 6e-22
 Identities = 50/85 (58%), Positives = 60/85 (70%)
 Frame = +3

Query: 255 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEA 434
           KEVSSY+KK+GYNP  + FVPISG+ GDNM+E ST + W+K            G  L+EA
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEA 219

Query: 435 LDAILPPARPTDKPLRLPLQDVYKM 509
           LD I  P RP+DKPLRLPLQDVYK+
Sbjct: 220 LDQINEPKRPSDKPLRLPLQDVYKI 244



 Score = 31.5 bits (68), Expect = 0.67
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 736 PT*GCCRFYAQVIVLNHPGQI 798
           P  G   F +QVI++NHPGQI
Sbjct: 321 PAKGAANFTSQVIIMNHPGQI 341


>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  146 bits (354), Expect = 1e-35
 Identities = 65/85 (76%), Positives = 78/85 (91%)
 Frame = +2

Query: 509 GGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 688
           GGIGTVPVGRVETG++KPG +V FAP  +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+
Sbjct: 245 GGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVA 304

Query: 689 VKELRRGYVAGDSKNNPPKGAADFT 763
           VK+L+RGYVA +SK++P KGAA+FT
Sbjct: 305 VKDLKRGYVASNSKDDPAKGAANFT 329



 Score =  139 bits (337), Expect = 2e-33
 Identities = 65/83 (78%), Positives = 74/83 (89%)
 Frame = +1

Query: 4   TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 183
           T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ
Sbjct: 88  TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQ 147

Query: 184 LIVGVNKMDSTEPPYSEPRFEEI 252
           +I   NKMD+T P YS+ R++EI
Sbjct: 148 MICCCNKMDATTPKYSKARYDEI 170



 Score =  101 bits (242), Expect = 6e-22
 Identities = 50/85 (58%), Positives = 60/85 (70%)
 Frame = +3

Query: 255 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEA 434
           KEVSSY+KK+GYNP  + FVPISG+ GDNM+E ST + W+K            G  L+EA
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEA 219

Query: 435 LDAILPPARPTDKPLRLPLQDVYKM 509
           LD I  P RP+DKPLRLPLQDVYK+
Sbjct: 220 LDQINEPKRPSDKPLRLPLQDVYKI 244



 Score = 31.5 bits (68), Expect = 0.67
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 736 PT*GCCRFYAQVIVLNHPGQI 798
           P  G   F +QVI++NHPGQI
Sbjct: 321 PAKGAANFTSQVIIMNHPGQI 341


>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
           putative similar to EF-1-alpha-related GTP-binding
           protein gi|1009232|gb|AAA79032
          Length = 532

 Score =  105 bits (252), Expect = 3e-23
 Identities = 48/86 (55%), Positives = 64/86 (74%)
 Frame = +1

Query: 4   TIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQ 183
           TI+DAPGH+ ++ NMI+G SQAD  VL+++A  GEFE G  + GQTREH  LA TLGV +
Sbjct: 182 TILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSK 241

Query: 184 LIVGVNKMDSTEPPYSEPRFEEIKRK 261
           LIV VNKMD     +S+ R++EI++K
Sbjct: 242 LIVVVNKMDDPTVNWSKERYDEIEQK 267



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 23/92 (25%), Positives = 47/92 (51%)
 Frame = +2

Query: 515 IGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 694
           +GTV +G+VE+G ++ G  +V  P     +V ++    + ++ A PG+N+   +  +  +
Sbjct: 342 MGTVVMGKVESGSIREGDSLVVMPNKEQVKVVAIYCDEDKVKRAGPGENLRVRITGIEDE 401

Query: 695 ELRRGYVAGDSKNNPPKGAADFTLKSLCLTIL 790
           ++  G+V   S  NP     +F  +   L +L
Sbjct: 402 DILSGFVL-SSIVNPVPAVTEFVAQLQILELL 432



 Score = 37.5 bits (83), Expect = 0.010
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
 Frame = +3

Query: 252 QKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--MPWFKGWQVERKEGKADGKC 422
           ++++  ++K  GYN    V F+PISG  G NM +   +   PW   W          G  
Sbjct: 265 EQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMGQEICPW---W---------SGPS 312

Query: 423 LIEALDAILPPARPTDKPLRLPLQDVYK 506
             E LD+I  P R  + P R+P+ D +K
Sbjct: 313 FFEVLDSIEIPPRDPNGPFRMPIIDKFK 340


>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
           EF-1-alpha, putative contains similarity to
           SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
           [Aeropyrum pernix]
          Length = 667

 Score = 91.9 bits (218), Expect = 5e-19
 Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
 Frame = +1

Query: 1   VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQTREHALLAFTLGV 177
           V ++D+PGH+DF+ NMI G +QAD A+L++ A  G FEAG     GQTREHA +    GV
Sbjct: 319 VVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQTREHARVLRGFGV 378

Query: 178 KQLIVGVNKMDSTEPPYSEPRFEEIKR 258
           +Q+IV +NKMD     YS+ RF+ IK+
Sbjct: 379 EQVIVAINKMDIV--GYSKERFDLIKQ 403



 Score = 37.9 bits (84), Expect = 0.008
 Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
 Frame = +3

Query: 252 QKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE-PSTKMPWFKGWQVERKEGKADGKCLI 428
           ++ V S+++   +  +++ ++P+S     N++  PS        W          G CL+
Sbjct: 402 KQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAPSDNR--LSSWY--------QGPCLL 451

Query: 429 EALDAILPPARPTDKPLRLPLQDVYK 506
           +A+D++  P R   KPL +P+ D  +
Sbjct: 452 DAVDSVKSPDRDVSKPLLMPICDAVR 477



 Score = 37.9 bits (84), Expect = 0.008
 Identities = 17/61 (27%), Positives = 33/61 (54%)
 Frame = +2

Query: 533 GRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGY 712
           G++E G ++PG+ V+  P+     ++S+E   +A   A  GDNV   ++ +   ++  G 
Sbjct: 488 GKLEAGAVRPGSKVMVMPSGDQGTIRSLERDSQACTIARAGDNVALALQGIDANQVMAGD 547

Query: 713 V 715
           V
Sbjct: 548 V 548


>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
           identical to SWISS-PROT:P17745 elongation factor Tu,
           chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
          Length = 476

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 30/70 (42%), Positives = 43/70 (61%)
 Frame = +1

Query: 10  IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 189
           +D PGH D++KNMITG +Q D A+L+V+   G          QT+EH LLA  +GV  ++
Sbjct: 147 VDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPDMV 199

Query: 190 VGVNKMDSTE 219
           V +NK D  +
Sbjct: 200 VFLNKEDQVD 209



 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = +2

Query: 512 GIGTVPVGRVETGVLKPGTIVVFAPANITTE--VKSVEMHHEALQEAVPGDNVGFNVKNV 685
           G GTV  GRVE G +K G  V       T    V  VEM  + L EA+ GDNVG  ++ +
Sbjct: 300 GRGTVATGRVERGTVKVGETVDLVGLRETRSYTVTGVEMFQKILDEALAGDNVGLLLRGI 359

Query: 686 SVKELRRGYV 715
              +++RG V
Sbjct: 360 QKADIQRGMV 369


>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
           putative similar to mitochondrial elongation factor Tu
           [Arabidopsis thaliana] gi|1149571|emb|CAA61511
          Length = 454

 Score = 61.7 bits (143), Expect = 6e-10
 Identities = 30/72 (41%), Positives = 43/72 (59%)
 Frame = +1

Query: 10  IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 189
           +D PGH D++KNMITG +Q D  +L+V+   G          QT+EH LLA  +GV  L+
Sbjct: 135 VDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHILLARQVGVPSLV 187

Query: 190 VGVNKMDSTEPP 225
             +NK+D  + P
Sbjct: 188 CFLNKVDVVDDP 199



 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
 Frame = +2

Query: 512 GIGTVPVGRVETGVLKPGTIVVFAPAN-----ITTEVKSVEMHHEALQEAVPGDNVGFNV 676
           G GTV  GR+E GV+K G  V           + + V  VEM  + L     GDNVG  +
Sbjct: 280 GRGTVATGRIEQGVIKVGEEVEILGLREGGVPLKSTVTGVEMFKKILDNGQAGDNVGLLL 339

Query: 677 KNVSVKELRRGYV 715
           + +  ++++RG V
Sbjct: 340 RGLKREDIQRGMV 352



 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 423 LIEALDAILP-PARPTDKPLRLPLQDVYKM 509
           L++A+D  +P P R  DKP  +P++DV+ +
Sbjct: 249 LMDAVDEYIPDPVRVLDKPFLMPIEDVFSI 278


>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
           subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
           putative 
          Length = 465

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 26/92 (28%), Positives = 45/92 (48%)
 Frame = +1

Query: 1   VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
           V+ +D PGH   +  M+ G +  D A+LI+AA             QT EH      + +K
Sbjct: 121 VSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHLK 174

Query: 181 QLIVGVNKMDSTEPPYSEPRFEEIKRKYPHTS 276
            +I+  NK+D  +   +  + E+I+R   +T+
Sbjct: 175 DIIIIQNKIDLIQENEAIKQHEDIQRFITNTN 206


>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
           subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
           putative similar to SP|Q09130 Eukaryotic translation
           initiation factor 2 gamma subunit (eIF-2- gamma)
           {Schizosaccharomyces pombe}; contains Pfam profile
           PF00009: Elongation factor Tu GTP binding domain;
           isoform predicted to contain a TG non-consensus acceptor
           splice site.
          Length = 471

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 24/92 (26%), Positives = 43/92 (46%)
 Frame = +1

Query: 1   VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
           V+ +D PGH   +  M+ G +  D A+L++AA             QT EH      + +K
Sbjct: 129 VSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLK 182

Query: 181 QLIVGVNKMDSTEPPYSEPRFEEIKRKYPHTS 276
            +I+  NK+D      +  + E I++   +T+
Sbjct: 183 HIIILQNKIDLINEKAATEQHEAIQKFITNTN 214


>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
           subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
           putative similar to SP|Q09130 Eukaryotic translation
           initiation factor 2 gamma subunit (eIF-2- gamma)
           {Schizosaccharomyces pombe}; contains Pfam profile
           PF00009: Elongation factor Tu GTP binding domain;
           isoform predicted to contain a TG non-consensus acceptor
           splice site.
          Length = 284

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 24/92 (26%), Positives = 43/92 (46%)
 Frame = +1

Query: 1   VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
           V+ +D PGH   +  M+ G +  D A+L++AA             QT EH      + +K
Sbjct: 129 VSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLK 182

Query: 181 QLIVGVNKMDSTEPPYSEPRFEEIKRKYPHTS 276
            +I+  NK+D      +  + E I++   +T+
Sbjct: 183 HIIILQNKIDLINEKAATEQHEAIQKFITNTN 214


>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
           subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
           putative similar to gb|U37354 from S. pombe. ESTs
           gb|T41979, gb|N37284 and gb|N37529 come from this gene
          Length = 465

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 23/86 (26%), Positives = 41/86 (47%)
 Frame = +1

Query: 1   VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
           V+ +D PGH   +  M+ G +  D A+L++AA             QT EH      + +K
Sbjct: 123 VSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSEHLAAVEIMQLK 176

Query: 181 QLIVGVNKMDSTEPPYSEPRFEEIKR 258
            +I+  NK+D  +   +  + E I++
Sbjct: 177 HIIILQNKIDLIQENVAINQHEAIQK 202


>At4g11160.1 68417.m01808 translation initiation factor IF-2,
           mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
           Translation initiation factor IF-2, mitochondrial
           precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
          Length = 743

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 1   VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 105
           +T +D PGH  F +    G +  D  VL+VAA  G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304


>At1g06220.2 68414.m00656 elongation factor Tu family protein
           similar to Cryptosporidium parvum elongation factor-2
           GB:U21667 GI:706974 from [Cryptosporidium parvum]
          Length = 987

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 7   IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 105
           I+D PGH +F   M      AD AVLIV A  G
Sbjct: 213 IMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245


>At1g06220.1 68414.m00655 elongation factor Tu family protein
           similar to Cryptosporidium parvum elongation factor-2
           GB:U21667 GI:706974 from [Cryptosporidium parvum]
          Length = 987

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 7   IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 105
           I+D PGH +F   M      AD AVLIV A  G
Sbjct: 213 IMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245


>At3g22980.1 68416.m02898 elongation factor Tu family protein
           similar to eukaryotic translation elongation factor 2
           GB:NP_001952 [Homo sapiens]
          Length = 1015

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 1   VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 105
           + +ID+PGH DF   + T    +D A+++V A  G
Sbjct: 76  LNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110


>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
           identical to myb-related transcription factor (CCA1)
           GI:4090569 from [Arabidopsis thaliana]
          Length = 608

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 396 KEGKADGKCLIEALDAILPPARPTDKP 476
           KE +A G  + +ALD  +PP RP  KP
Sbjct: 74  KEAEAKGVAMGQALDIAIPPPRPKRKP 100


>At4g31430.2 68417.m04465 expressed protein
          Length = 574

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 19/37 (51%), Positives = 20/37 (54%)
 Frame = -1

Query: 541 NSADGHGTNTTILYTSCRGRRRGLSVGRAGGRMASRA 431
           NSA     NT +L  S RGR RG   GR GGR   RA
Sbjct: 538 NSASSSPGNTKVLAYSRRGRGRGRGRGR-GGRGKGRA 573


>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
           PF04819: Family of unknown function (DUF716) (Plant
           viral-response family)
          Length = 319

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +1

Query: 10  IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 186
           I   GH D+ +     T Q +C + L+V   TG F    +KNG  R+       LG +  
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285

Query: 187 IVGVNKMDSTE 219
            +    +DS E
Sbjct: 286 NLSTFTLDSDE 296


>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
           family protein / eIF-2 family protein similar to
           SP|O60841 Translation initiation factor IF-2 {Homo
           sapiens}; contains Pfam profiles PF00009: Elongation
           factor Tu GTP binding domain, PF03144: Elongation factor
           Tu domain 2
          Length = 1201

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = +1

Query: 7   IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 186
           +ID PGH  F      G+S  D A+L+V     + + G+    QT E +L    +   + 
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756

Query: 187 IVGVNKMD 210
           I+ +NK+D
Sbjct: 757 IIALNKVD 764


>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
           family protein / eIF-2 family protein similar to
           SP|O60841 Translation initiation factor IF-2 {Homo
           sapiens}; contains Pfam profiles PF00009: Elongation
           factor Tu GTP binding domain, PF03144: Elongation factor
           Tu domain 2
          Length = 1088

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 22/70 (31%), Positives = 33/70 (47%)
 Frame = +1

Query: 1   VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
           + +ID PGH  F      G++  D A+L+V     +   G+    QT E   L     VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610

Query: 181 QLIVGVNKMD 210
             I+ +NK+D
Sbjct: 611 -FIIALNKVD 619


>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
           family protein / eIF-2 family protein similar to
           SP|O60841 Translation initiation factor IF-2 {Homo
           sapiens}; contains Pfam profile PF00009: Elongation
           factor Tu GTP binding domain
          Length = 630

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 7   IIDAPGHRDFIKNMITGTSQADCAVLIV 90
           +ID PGH  F      G+S  D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140


>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
           family protein / eIF-2 family protein similar to IF2
           protein [Drosophila melanogaster] GI:7108770; contains
           Pfam profile PF03144: Elongation factor Tu domain 2
          Length = 1294

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 7   IIDAPGHRDFIKNMITGTSQADCAVLIV 90
           +ID PGH  F      G+S  D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799


>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
           profile: PF00168 C2 domain
          Length = 815

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 25/68 (36%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
 Frame = +1

Query: 253 KRKYPHTSRRLATTQLLSLS---CPFLDGTETTCWSLQPKCLGSR-DGRWSVRKAKLTEN 420
           KR     SR +   QLL  S   CP L G   TCWS   +    R D  W      +   
Sbjct: 127 KRLRQRRSRLIENIQLLEFSLGSCPPLLGLHGTCWSKSGEQKIMRLDFNWDTTDLSILLQ 186

Query: 421 ASLKLSMP 444
           A  KLSMP
Sbjct: 187 A--KLSMP 192


>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
           similar to SP|P25039 Elongation factor G 1,
           mitochondrial precursor (mEF-G-1) {Saccharomyces
           cerevisiae}; contains Pfam profiles PF00009: Elongation
           factor Tu GTP binding domain, PF03764: Elongation factor
           G domain IV, PF00679: Elongation factor G C-terminus
          Length = 754

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +1

Query: 1   VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 150
           V IID PGH DF   +       D A+L++ +  G     I+ + Q R +
Sbjct: 135 VNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184


>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
           similar to mitochondrial elongation factor GI:3917 from
           [Saccharomyces cerevisiae]
          Length = 754

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +1

Query: 1   VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 150
           V IID PGH DF   +       D A+L++ +  G     I+ + Q R +
Sbjct: 135 VNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184


>At3g57550.1 68416.m06408 guanylate kinase 2 (GK-2) identical to
           guanylate kinase (GK-2) [Arabidopsis thaliana]
           gi|7861798|gb|AAF70409
          Length = 389

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
 Frame = -3

Query: 371 PRHFG*RLQHVVSVP---SRNG---HESDSSWVVANLLDV*GYFLLISSNLGSLYGGSVE 210
           P  FG  + H    P    +NG   H +D + +   + D  G FL  +S  G+LYG S+E
Sbjct: 162 PSMFGFSVSHTTRAPRCMEKNGVHYHFTDKTVMEKEIKD--GKFLEFASVHGNLYGTSIE 219

Query: 209 SI 204
           S+
Sbjct: 220 SV 221


>At5g50780.1 68418.m06291 ATP-binding region, ATPase-like
           domain-containing protein low similarity to microrchidia
           [Homo sapiens] GI:5410257; contains Pfam profile
           PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
           HSP90-like domain protein
          Length = 823

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/64 (21%), Positives = 29/64 (45%)
 Frame = -3

Query: 566 YLVSTHQFQLCRRARYQYHHFVYVLQGKTQGLVSGAGRWQDGIESFNEAFSVSFAFLTLH 387
           YL  +H+F++  R +   HH +     +T+ +        DG   ++  +++    L LH
Sbjct: 412 YLKISHEFRIILRGKDVEHHNIVNDMMQTEKITYRPKEAADGCAKYSNLYNLKIWLLVLH 471

Query: 386 LPSL 375
           +  L
Sbjct: 472 VSQL 475


>At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma
           membrane-type, putative / Ca2+-ATPase, putative (ACA10)
           identical to SP|Q9SZR1 Potential calcium-transporting
           ATPase 10, plasma membrane-type (EC 3.6.3.8)
           (Ca(2+)-ATPase isoform 10) {Arabidopsis thaliana};
           similar to SP|Q9LF79 Calcium-transporting ATPase 8,
           plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
           8) {Arabidopsis thaliana}
          Length = 1069

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 651 GTASWRASWCISTDLTSVVMLAGAKTTMVPGFNT 550
           G + WR  W  S DLT ++++  A  ++  G  T
Sbjct: 178 GRSFWRFVWEASQDLTLIILIVAAVASLALGIKT 211


>At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearly
            identical to ubiquitin-protein ligase 1 [Arabidopsis
            thaliana] GI:7108521; E3, HECT-domain protein family;
            similar to GI:7108521, GB:AAF36454 from [Arabidopsis
            thaliana]
          Length = 3891

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = -2

Query: 558  FNTPVSTLPTGTVPIPPFCIRLAGEDA 478
            F+TPV  LP   VP+ PF  RLAG  A
Sbjct: 2521 FDTPV--LPFDQVPVDPFSARLAGGGA 2545


>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
           1 [Arabidopsis thaliana] Swiss-Prot:Q42525
          Length = 493

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 345 LEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 443
           ++  T   W KG++V   EGK    CL EA++A
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221


>At1g27900.1 68414.m03419 RNA helicase, putative similar to
           SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
           HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
           profiles PF04408: Helicase associated domain (HA2),
           PF00271: Helicase conserved C-terminal domain
          Length = 700

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -2

Query: 672 LKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTP 547
           L+P+LS        + C+S  LT V ML+ A+TT++P  + P
Sbjct: 428 LEPSLSRTLIEANETGCLSQALTVVAMLS-AETTLLPARSKP 468


>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
           GTP-binding protein GUF1 - Saccharomyces cerevisiae,
           PIR:S50374
          Length = 661

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +1

Query: 1   VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
           + +ID PGH DF   +    S    A+L+V A  G          QT  +  LAF   + 
Sbjct: 137 LNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------VQAQTVANFYLAFEANL- 188

Query: 181 QLIVGVNKMD 210
            ++  +NK+D
Sbjct: 189 TIVPVINKID 198


>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
           protein contains Pfam profile PF01388: ARID/BRIGHT DNA
           binding domain
          Length = 747

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +2

Query: 281 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 382
           DW+    C   AHF   RR  +GAF   A   G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720


>At1g17220.1 68414.m02098 translation initiation factor IF-2,
           chloroplast, putative similar to SP|P57997|IF2C_PHAVU
           Translation initiation factor IF-2, chloroplast
           precursor (PvIF2cp) {Phaseolus vulgaris}
          Length = 1026

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = +1

Query: 10  IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 189
           +D PGH  F      G    D A+++VAA  G          QT E A+         ++
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG-------IRPQTNE-AIAHAKAAAVPIV 608

Query: 190 VGVNKMD 210
           + +NK+D
Sbjct: 609 IAINKID 615


>At5g13650.2 68418.m01585 elongation factor family protein contains
           Pfam profiles: PF00009 elongation factor Tu GTP binding
           domain,PF00679 elongation factor G C-terminus,  PF03144
           elongation factor Tu domain 2
          Length = 676

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 26/81 (32%), Positives = 35/81 (43%)
 Frame = +1

Query: 1   VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
           V IID PGH DF   +    +  D  +L+V +  G          QTR     A   G  
Sbjct: 148 VNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP-------QTRFVLKKALEFG-H 199

Query: 181 QLIVGVNKMDSTEPPYSEPRF 243
            ++V VNK+D    P + P F
Sbjct: 200 AVVVVVNKIDR---PSARPEF 217


>At5g13650.1 68418.m01584 elongation factor family protein contains
           Pfam profiles: PF00009 elongation factor Tu GTP binding
           domain,PF00679 elongation factor G C-terminus,  PF03144
           elongation factor Tu domain 2
          Length = 675

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 26/81 (32%), Positives = 35/81 (43%)
 Frame = +1

Query: 1   VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
           V IID PGH DF   +    +  D  +L+V +  G          QTR     A   G  
Sbjct: 147 VNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP-------QTRFVLKKALEFG-H 198

Query: 181 QLIVGVNKMDSTEPPYSEPRF 243
            ++V VNK+D    P + P F
Sbjct: 199 AVVVVVNKIDR---PSARPEF 216


>At5g13580.1 68418.m01570 ABC transporter family protein
          Length = 727

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -2

Query: 621 ISTDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTVPIPPFCIRLA 490
           IS  ++   +++GA TT     ++PVST+PT      PF + LA
Sbjct: 384 ISASISKGKLVSGATTTTHSSGSSPVSTIPTFA---NPFWVELA 424


>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
          Length = 681

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
 Frame = +1

Query: 1   VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 180
           + +ID PGH DF   +    +  + A+L+V A  G  EA      QT  +  LA    + 
Sbjct: 154 LNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VEA------QTLANVYLALENNL- 205

Query: 181 QLIVGVNKMD--STEPPYSEPRFEEI 252
           ++I  +NK+D    EP       EE+
Sbjct: 206 EIIPVLNKIDLPGAEPEKVLREIEEV 231


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,733,749
Number of Sequences: 28952
Number of extensions: 453731
Number of successful extensions: 1509
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -