Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30412
(815 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X78627-1|CAA55341.1| 228|Homo sapiens translin protein. 118 3e-26
BT019491-1|AAV38298.1| 228|Homo sapiens translin protein. 118 3e-26
BT019490-1|AAV38297.1| 228|Homo sapiens translin protein. 118 3e-26
BC002359-1|AAH02359.1| 228|Homo sapiens translin protein. 118 3e-26
AC018737-2|AAY14831.1| 228|Homo sapiens unknown protein. 118 3e-26
AK222868-1|BAD96588.1| 228|Homo sapiens translin variant protein. 117 6e-26
Y12563-1|CAA73150.1| 193|Homo sapiens protein ( H.sapiens gene ... 116 1e-25
X95073-1|CAA64469.1| 290|Homo sapiens Translin associated prote... 49 2e-05
BC011797-1|AAH11797.1| 290|Homo sapiens translin-associated fac... 49 2e-05
BC010376-1|AAH10376.1| 290|Homo sapiens translin-associated fac... 49 2e-05
AL626763-6|CAH70959.1| 290|Homo sapiens translin-associated fac... 49 2e-05
AL445524-3|CAH72107.1| 290|Homo sapiens translin-associated fac... 49 2e-05
AF271269-1|AAK58640.1| 290|Homo sapiens translin-like protein p... 49 2e-05
AK126014-1|BAC86392.1| 1233|Homo sapiens protein ( Homo sapiens ... 32 2.9
>X78627-1|CAA55341.1| 228|Homo sapiens translin protein.
Length = 228
Score = 118 bits (284), Expect = 3e-26
Identities = 55/72 (76%), Positives = 63/72 (87%)
Frame = +1
Query: 508 MTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKNDHLRKRFDALKYDVKK 687
+ + SELSRL+VNSVT GDY RPL IS F+ EL++GFRLLNLKND LRKR+D LKYDVKK
Sbjct: 145 LILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKK 204
Query: 688 IEEVVYDLSIRG 723
+EEVVYDLSIRG
Sbjct: 205 VEEVVYDLSIRG 216
Score = 75.4 bits (177), Expect = 2e-13
Identities = 31/71 (43%), Positives = 47/71 (66%)
Frame = +2
Query: 296 LKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMAEILGVSPVELKEGF 475
LK P Y+++ +HWRF+ QR +L A ++LE L + E + EILG+ P + ++GF
Sbjct: 75 LKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEP-DREKGF 133
Query: 476 HLDIEDYLIGL 508
HLD+EDYL G+
Sbjct: 134 HLDVEDYLSGV 144
Score = 39.9 bits (89), Expect = 0.011
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +3
Query: 87 INKIFSDFQKNLDQEQELRETIRTICKEVDQISREATTVLQVIH 218
+++IF + Q L EQ++RE IR + + ++Q +RE T+LQ +H
Sbjct: 3 VSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVH 46
>BT019491-1|AAV38298.1| 228|Homo sapiens translin protein.
Length = 228
Score = 118 bits (284), Expect = 3e-26
Identities = 55/72 (76%), Positives = 63/72 (87%)
Frame = +1
Query: 508 MTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKNDHLRKRFDALKYDVKK 687
+ + SELSRL+VNSVT GDY RPL IS F+ EL++GFRLLNLKND LRKR+D LKYDVKK
Sbjct: 145 LILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKK 204
Query: 688 IEEVVYDLSIRG 723
+EEVVYDLSIRG
Sbjct: 205 VEEVVYDLSIRG 216
Score = 75.4 bits (177), Expect = 2e-13
Identities = 31/71 (43%), Positives = 47/71 (66%)
Frame = +2
Query: 296 LKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMAEILGVSPVELKEGF 475
LK P Y+++ +HWRF+ QR +L A ++LE L + E + EILG+ P + ++GF
Sbjct: 75 LKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEP-DREKGF 133
Query: 476 HLDIEDYLIGL 508
HLD+EDYL G+
Sbjct: 134 HLDVEDYLSGV 144
Score = 39.9 bits (89), Expect = 0.011
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +3
Query: 87 INKIFSDFQKNLDQEQELRETIRTICKEVDQISREATTVLQVIH 218
+++IF + Q L EQ++RE IR + + ++Q +RE T+LQ +H
Sbjct: 3 VSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVH 46
>BT019490-1|AAV38297.1| 228|Homo sapiens translin protein.
Length = 228
Score = 118 bits (284), Expect = 3e-26
Identities = 55/72 (76%), Positives = 63/72 (87%)
Frame = +1
Query: 508 MTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKNDHLRKRFDALKYDVKK 687
+ + SELSRL+VNSVT GDY RPL IS F+ EL++GFRLLNLKND LRKR+D LKYDVKK
Sbjct: 145 LILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKK 204
Query: 688 IEEVVYDLSIRG 723
+EEVVYDLSIRG
Sbjct: 205 VEEVVYDLSIRG 216
Score = 75.4 bits (177), Expect = 2e-13
Identities = 31/71 (43%), Positives = 47/71 (66%)
Frame = +2
Query: 296 LKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMAEILGVSPVELKEGF 475
LK P Y+++ +HWRF+ QR +L A ++LE L + E + EILG+ P + ++GF
Sbjct: 75 LKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEP-DREKGF 133
Query: 476 HLDIEDYLIGL 508
HLD+EDYL G+
Sbjct: 134 HLDVEDYLSGV 144
Score = 39.9 bits (89), Expect = 0.011
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +3
Query: 87 INKIFSDFQKNLDQEQELRETIRTICKEVDQISREATTVLQVIH 218
+++IF + Q L EQ++RE IR + + ++Q +RE T+LQ +H
Sbjct: 3 VSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVH 46
>BC002359-1|AAH02359.1| 228|Homo sapiens translin protein.
Length = 228
Score = 118 bits (284), Expect = 3e-26
Identities = 55/72 (76%), Positives = 63/72 (87%)
Frame = +1
Query: 508 MTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKNDHLRKRFDALKYDVKK 687
+ + SELSRL+VNSVT GDY RPL IS F+ EL++GFRLLNLKND LRKR+D LKYDVKK
Sbjct: 145 LILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKK 204
Query: 688 IEEVVYDLSIRG 723
+EEVVYDLSIRG
Sbjct: 205 VEEVVYDLSIRG 216
Score = 75.4 bits (177), Expect = 2e-13
Identities = 31/71 (43%), Positives = 47/71 (66%)
Frame = +2
Query: 296 LKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMAEILGVSPVELKEGF 475
LK P Y+++ +HWRF+ QR +L A ++LE L + E + EILG+ P + ++GF
Sbjct: 75 LKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEP-DREKGF 133
Query: 476 HLDIEDYLIGL 508
HLD+EDYL G+
Sbjct: 134 HLDVEDYLSGV 144
Score = 39.9 bits (89), Expect = 0.011
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +3
Query: 87 INKIFSDFQKNLDQEQELRETIRTICKEVDQISREATTVLQVIH 218
+++IF + Q L EQ++RE IR + + ++Q +RE T+LQ +H
Sbjct: 3 VSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVH 46
>AC018737-2|AAY14831.1| 228|Homo sapiens unknown protein.
Length = 228
Score = 118 bits (284), Expect = 3e-26
Identities = 55/72 (76%), Positives = 63/72 (87%)
Frame = +1
Query: 508 MTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKNDHLRKRFDALKYDVKK 687
+ + SELSRL+VNSVT GDY RPL IS F+ EL++GFRLLNLKND LRKR+D LKYDVKK
Sbjct: 145 LILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKK 204
Query: 688 IEEVVYDLSIRG 723
+EEVVYDLSIRG
Sbjct: 205 VEEVVYDLSIRG 216
Score = 75.4 bits (177), Expect = 2e-13
Identities = 31/71 (43%), Positives = 47/71 (66%)
Frame = +2
Query: 296 LKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMAEILGVSPVELKEGF 475
LK P Y+++ +HWRF+ QR +L A ++LE L + E + EILG+ P + ++GF
Sbjct: 75 LKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEP-DREKGF 133
Query: 476 HLDIEDYLIGL 508
HLD+EDYL G+
Sbjct: 134 HLDVEDYLSGV 144
Score = 39.9 bits (89), Expect = 0.011
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +3
Query: 87 INKIFSDFQKNLDQEQELRETIRTICKEVDQISREATTVLQVIH 218
+++IF + Q L EQ++RE IR + + ++Q +RE T+LQ +H
Sbjct: 3 VSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVH 46
>AK222868-1|BAD96588.1| 228|Homo sapiens translin variant protein.
Length = 228
Score = 117 bits (281), Expect = 6e-26
Identities = 54/72 (75%), Positives = 63/72 (87%)
Frame = +1
Query: 508 MTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKNDHLRKRFDALKYDVKK 687
+ + SELSRL+VNSVT GDY RPL IS F+ EL++GFRLLNLKND LRKR+D LKYDVK+
Sbjct: 145 LILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKR 204
Query: 688 IEEVVYDLSIRG 723
+EEVVYDLSIRG
Sbjct: 205 VEEVVYDLSIRG 216
Score = 75.4 bits (177), Expect = 2e-13
Identities = 31/71 (43%), Positives = 47/71 (66%)
Frame = +2
Query: 296 LKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMAEILGVSPVELKEGF 475
LK P Y+++ +HWRF+ QR +L A ++LE L + E + EILG+ P + ++GF
Sbjct: 75 LKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEP-DREKGF 133
Query: 476 HLDIEDYLIGL 508
HLD+EDYL G+
Sbjct: 134 HLDVEDYLSGV 144
Score = 39.9 bits (89), Expect = 0.011
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +3
Query: 87 INKIFSDFQKNLDQEQELRETIRTICKEVDQISREATTVLQVIH 218
+++IF + Q L EQ++RE IR + + ++Q +RE T+LQ +H
Sbjct: 3 VSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVH 46
>Y12563-1|CAA73150.1| 193|Homo sapiens protein ( H.sapiens gene
encoding translin, exon 2 (and joined CDS). ).
Length = 193
Score = 116 bits (278), Expect = 1e-25
Identities = 54/71 (76%), Positives = 62/71 (87%)
Frame = +1
Query: 508 MTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLLNLKNDHLRKRFDALKYDVKK 687
+ + SELSRL+VNSVT GDY RPL IS F+ EL++GFRLLNLKND LRKR+D LKYDVKK
Sbjct: 123 LILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKK 182
Query: 688 IEEVVYDLSIR 720
+EEVVYDLSIR
Sbjct: 183 VEEVVYDLSIR 193
Score = 75.4 bits (177), Expect = 2e-13
Identities = 31/71 (43%), Positives = 47/71 (66%)
Frame = +2
Query: 296 LKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMAEILGVSPVELKEGF 475
LK P Y+++ +HWRF+ QR +L A ++LE L + E + EILG+ P + ++GF
Sbjct: 53 LKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEP-DREKGF 111
Query: 476 HLDIEDYLIGL 508
HLD+EDYL G+
Sbjct: 112 HLDVEDYLSGV 122
>X95073-1|CAA64469.1| 290|Homo sapiens Translin associated protein
X protein.
Length = 290
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 514 MCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLL-NLKNDHLRKRFDALKYDVKKI 690
+ EL R+ +NSV GD + P +S+F+ ++ GF + N + K+ LK + K+
Sbjct: 194 LTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKV 253
Query: 691 EEVVYDLSIRGL-LPK 735
E Y L +RG +PK
Sbjct: 254 ENACYALKVRGSEIPK 269
>BC011797-1|AAH11797.1| 290|Homo sapiens translin-associated factor
X protein.
Length = 290
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 514 MCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLL-NLKNDHLRKRFDALKYDVKKI 690
+ EL R+ +NSV GD + P +S+F+ ++ GF + N + K+ LK + K+
Sbjct: 194 LTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKV 253
Query: 691 EEVVYDLSIRGL-LPK 735
E Y L +RG +PK
Sbjct: 254 ENACYALKVRGSEIPK 269
>BC010376-1|AAH10376.1| 290|Homo sapiens translin-associated factor
X protein.
Length = 290
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 514 MCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLL-NLKNDHLRKRFDALKYDVKKI 690
+ EL R+ +NSV GD + P +S+F+ ++ GF + N + K+ LK + K+
Sbjct: 194 LTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKV 253
Query: 691 EEVVYDLSIRGL-LPK 735
E Y L +RG +PK
Sbjct: 254 ENACYALKVRGSEIPK 269
>AL626763-6|CAH70959.1| 290|Homo sapiens translin-associated factor
X protein.
Length = 290
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 514 MCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLL-NLKNDHLRKRFDALKYDVKKI 690
+ EL R+ +NSV GD + P +S+F+ ++ GF + N + K+ LK + K+
Sbjct: 194 LTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKV 253
Query: 691 EEVVYDLSIRGL-LPK 735
E Y L +RG +PK
Sbjct: 254 ENACYALKVRGSEIPK 269
>AL445524-3|CAH72107.1| 290|Homo sapiens translin-associated factor
X protein.
Length = 290
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 514 MCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLL-NLKNDHLRKRFDALKYDVKKI 690
+ EL R+ +NSV GD + P +S+F+ ++ GF + N + K+ LK + K+
Sbjct: 194 LTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKV 253
Query: 691 EEVVYDLSIRGL-LPK 735
E Y L +RG +PK
Sbjct: 254 ENACYALKVRGSEIPK 269
>AF271269-1|AAK58640.1| 290|Homo sapiens translin-like protein
protein.
Length = 290
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 514 MCSELSRLAVNSVTRGDYERPLRISKFVMELNAGFRLL-NLKNDHLRKRFDALKYDVKKI 690
+ EL R+ +NSV GD + P +S+F+ ++ GF + N + K+ LK + K+
Sbjct: 194 LTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKV 253
Query: 691 EEVVYDLSIRGL-LPK 735
E Y L +RG +PK
Sbjct: 254 ENACYALKVRGSEIPK 269
>AK126014-1|BAC86392.1| 1233|Homo sapiens protein ( Homo sapiens
cDNA FLJ44026 fis, clone TESTI4026762. ).
Length = 1233
Score = 31.9 bits (69), Expect = 2.9
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 558 RRLRAPP-EDLQVRDGTER-RLQAIELEERSFAQTFRRPKVRREENRGSRLRSQHQGAAA 731
R L AP ED + R+ ER RL+A E R AQ + R EE+ +RL + +
Sbjct: 293 RSLEAPRWEDAERREREERERLEAEEERRRLQAQAQAEERRRLEED--ARLEERRRQEEE 350
Query: 732 QGRCGPRTRTQ 764
+GRC + Q
Sbjct: 351 EGRCAEELKRQ 361
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,914,368
Number of Sequences: 237096
Number of extensions: 2372407
Number of successful extensions: 9848
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9835
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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