Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30411
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.77 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.77 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.1  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.2  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 261 LSRSKDVELMLQ*N*NNDSAFGYAFLYSLVG 353
           L   +DVEL+L     N  +F Y FL+S +G
Sbjct: 82  LLNPEDVELVLTDTKQNTKSFIYHFLHSWLG 112


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 261 LSRSKDVELMLQ*N*NNDSAFGYAFLYSLVG 353
           L   +DVEL+L     N  +F Y FL+S +G
Sbjct: 82  LLNPEDVELVLTDTKQNTKSFIYHFLHSWLG 112


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 15/50 (30%), Positives = 19/50 (38%)
 Frame = -1

Query: 166 KIMIEGLLVARRPFQFHQDRWASKGSAKRGGIG*QLPERLRSRPNNSRAT 17
           K M+ G       F  H    A   +A  GG+  Q+P     R    RAT
Sbjct: 241 KSMLPGAQTVGASFGLHATGSAPSPTAGAGGLPPQVPSPRSQRRYTGRAT 290


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 357 YRPLSYKETHIQRRYHYFNFIA 292
           +R L+   +H+Q+  HY N I+
Sbjct: 488 FRSLAEMTSHMQQTQHYTNIIS 509


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +1

Query: 400 VLEPLYRGSLA 432
           VLEPLY G+LA
Sbjct: 491 VLEPLYSGNLA 501


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = -2

Query: 366 HMLYRPLSYKETHIQRRYHYF 304
           H ++  +S+K++ +Q++  YF
Sbjct: 71  HAIFDLISFKDSDLQQKLRYF 91


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = -2

Query: 366 HMLYRPLSYKETHIQRRYHYF 304
           H ++  +S+K++ +Q++  YF
Sbjct: 71  HAIFDLISFKDSDLQQKLRYF 91


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 211 NVSSKNKWGPKY 176
           N+S+KN W P++
Sbjct: 188 NISAKNPWFPRH 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,088
Number of Sequences: 336
Number of extensions: 3584
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)